Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_24h.class.cls
#double_gel_8d_versus_double_gel_24h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in classdouble_gel_8d
GeneSetCELLULAR_LIPID_METABOLIC_PROCESS
Enrichment Score (ES)0.52621645
Normalized Enrichment Score (NES)1.9791853
Nominal p-value0.0
FDR q-value0.0066572633
FWER p-Value0.207
Table: GSEA Results Summary



Fig 1: Enrichment plot: CELLULAR_LIPID_METABOLIC_PROCESS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HAO2HAO2
Entrez,  Source
hydroxyacid oxidase 2 (long chain)181.0710.0445Yes
2CPT1ACPT1A
Entrez,  Source
carnitine palmitoyltransferase 1A (liver)840.6860.0689Yes
3ACOX2ACOX2
Entrez,  Source
acyl-Coenzyme A oxidase 2, branched chain970.6670.0965Yes
4SOAT1SOAT1
Entrez,  Source
sterol O-acyltransferase (acyl-Coenzyme A: cholesterol acyltransferase) 11000.6610.1247Yes
5LPLLPL
Entrez,  Source
lipoprotein lipase1070.6460.1519Yes
6PEMTPEMT
Entrez,  Source
phosphatidylethanolamine N-methyltransferase1420.5790.1741Yes
7ST8SIA3ST8SIA3
Entrez,  Source
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 31630.5420.1957Yes
8ABCG1ABCG1
Entrez,  Source
ATP-binding cassette, sub-family G (WHITE), member 11790.5190.2168Yes
9SMPD3SMPD3
Entrez,  Source
sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)2480.4420.2306Yes
10IHPK2IHPK2
Entrez,  Source
inositol hexaphosphate kinase 23130.3880.2423Yes
11B4GALNT1B4GALNT1
Entrez,  Source
beta-1,4-N-acetyl-galactosaminyl transferase 13250.3770.2576Yes
12FADS1FADS1
Entrez,  Source
fatty acid desaturase 13300.3730.2733Yes
13ECHS1ECHS1
Entrez,  Source
enoyl Coenzyme A hydratase, short chain, 1, mitochondrial3460.3670.2879Yes
14ECH1ECH1
Entrez,  Source
enoyl Coenzyme A hydratase 1, peroxisomal3500.3650.3033Yes
15GLYATGLYAT
Entrez,  Source
glycine-N-acyltransferase3790.3480.3160Yes
16PLCE1PLCE1
Entrez,  Source
phospholipase C, epsilon 13960.3390.3293Yes
17SCARB1SCARB1
Entrez,  Source
scavenger receptor class B, member 14310.3210.3404Yes
18PLA1APLA1A
Entrez,  Source
phospholipase A1 member A4350.3170.3538Yes
19HACL1HACL1
Entrez,  Source
2-hydroxyacyl-CoA lyase 14900.2890.3621Yes
20HSD3B1HSD3B1
Entrez,  Source
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 15010.2860.3735Yes
21RARRES2RARRES2
Entrez,  Source
retinoic acid receptor responder (tazarotene induced) 25440.2710.3819Yes
22DHCR24DHCR24
Entrez,  Source
24-dehydrocholesterol reductase5610.2670.3921Yes
23ALDH5A1ALDH5A1
Entrez,  Source
aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase)5950.2580.4007Yes
24BAATBAAT
Entrez,  Source
bile acid Coenzyme A: amino acid N-acyltransferase (glycine N-choloyltransferase)6020.2570.4112Yes
25NR1I2NR1I2
Entrez,  Source
nuclear receptor subfamily 1, group I, member 26090.2560.4217Yes
26CHPT1CHPT1
Entrez,  Source
choline phosphotransferase 16440.2460.4297Yes
27APOA1APOA1
Entrez,  Source
apolipoprotein A-I6460.2460.4401Yes
28APOMAPOM
Entrez,  Source
apolipoprotein M6870.2380.4472Yes
29ASAH1ASAH1
Entrez,  Source
N-acylsphingosine amidohydrolase (acid ceramidase) 17220.2310.4545Yes
30MLYCDMLYCD
Entrez,  Source
malonyl-CoA decarboxylase8170.2100.4564Yes
31PECIPECI
Entrez,  Source
peroxisomal D3,D2-enoyl-CoA isomerase8860.1970.4597Yes
32SCP2SCP2
Entrez,  Source
sterol carrier protein 28900.1970.4679Yes
33FADS2FADS2
Entrez,  Source
fatty acid desaturase 29340.1900.4728Yes
34MVKMVK
Entrez,  Source
mevalonate kinase (mevalonic aciduria)9980.1830.4758Yes
35CLN8CLN8
Entrez,  Source
ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)10370.1780.4805Yes
36PPARGC1APPARGC1A
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, alpha10660.1740.4859Yes
37DGAT1DGAT1
Entrez,  Source
diacylglycerol O-acyltransferase homolog 1 (mouse)10670.1740.4933Yes
38STSSTS
Entrez,  Source
steroid sulfatase (microsomal), arylsulfatase C, isozyme S11050.1700.4978Yes
39NSDHLNSDHL
Entrez,  Source
NAD(P) dependent steroid dehydrogenase-like11690.1640.5000Yes
40RETSATRETSAT
Entrez,  Source
retinol saturase (all-trans-retinol 13,14-reductase)12100.1600.5038Yes
41FDPSFDPS
Entrez,  Source
farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)12110.1600.5107Yes
42TSPOTSPO
Entrez,  Source
translocator protein (18kDa)12650.1540.5133Yes
43PLA2G5PLA2G5
Entrez,  Source
phospholipase A2, group V12990.1510.5172Yes
44APOA5APOA5
Entrez,  Source
apolipoprotein A-V14860.1360.5089Yes
45ACADSACADS
Entrez,  Source
acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain15440.1320.5103Yes
46SMPD2SMPD2
Entrez,  Source
sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)15660.1300.5142Yes
47HPGDHPGD
Entrez,  Source
hydroxyprostaglandin dehydrogenase 15-(NAD)16890.1230.5103Yes
48PEX7PEX7
Entrez,  Source
peroxisomal biogenesis factor 716960.1230.5151Yes
49ACADSBACADSB
Entrez,  Source
acyl-Coenzyme A dehydrogenase, short/branched chain17150.1220.5189Yes
50DHRS9DHRS9
Entrez,  Source
dehydrogenase/reductase (SDR family) member 917780.1180.5193Yes
51IDI1IDI1
Entrez,  Source
isopentenyl-diphosphate delta isomerase 118300.1150.5203Yes
52PLCD1PLCD1
Entrez,  Source
phospholipase C, delta 118670.1130.5225Yes
53APOC3APOC3
Entrez,  Source
apolipoprotein C-III18820.1130.5262Yes
54ST6GALNAC6ST6GALNAC6
Entrez,  Source
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 620680.1050.5167No
55AKR1D1AKR1D1
Entrez,  Source
aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)21110.1030.5179No
56DGAT2DGAT2
Entrez,  Source
diacylglycerol O-acyltransferase homolog 2 (mouse)22090.0990.5148No
57PSAPPSAP
Entrez,  Source
prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)22200.0990.5182No
58PPAP2APPAP2A
Entrez,  Source
phosphatidic acid phosphatase type 2A23130.0950.5153No
59NR0B2NR0B2
Entrez,  Source
nuclear receptor subfamily 0, group B, member 223300.0940.5181No
60PPT1PPT1
Entrez,  Source
palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile)23530.0930.5205No
61LYPLA3LYPLA3
Entrez,  Source
lysophospholipase 3 (lysosomal phospholipase A2)24310.0900.5185No
62ACOT12ACOT12
Entrez,  Source
acyl-CoA thioesterase 1224850.0880.5183No
63AGPAT1AGPAT1
Entrez,  Source
1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)25100.0880.5202No
64CYP19A1CYP19A1
Entrez,  Source
cytochrome P450, family 19, subfamily A, polypeptide 126400.0820.5139No
65DPM2DPM2
Entrez,  Source
dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit26780.0810.5146No
66GPX4GPX4
Entrez,  Source
glutathione peroxidase 4 (phospholipid hydroperoxidase)27130.0800.5154No
67LCATLCAT
Entrez,  Source
lecithin-cholesterol acyltransferase28880.0750.5054No
68PIGSPIGS
Entrez,  Source
phosphatidylinositol glycan anchor biosynthesis, class S29580.0720.5033No
69ACADVLACADVL
Entrez,  Source
acyl-Coenzyme A dehydrogenase, very long chain30020.0710.5030No
70PIGKPIGK
Entrez,  Source
phosphatidylinositol glycan anchor biosynthesis, class K30130.0710.5053No
71FAAHFAAH
Entrez,  Source
fatty acid amide hydrolase30910.0690.5024No
72BMP6BMP6
Entrez,  Source
bone morphogenetic protein 633480.0610.4856No
73ADIPOR1ADIPOR1
Entrez,  Source
adiponectin receptor 133940.0600.4848No
74PCYT2PCYT2
Entrez,  Source
phosphate cytidylyltransferase 2, ethanolamine34930.0580.4798No
75LTA4HLTA4H
Entrez,  Source
leukotriene A4 hydrolase35050.0570.4815No
76ST8SIA1ST8SIA1
Entrez,  Source
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 135540.0560.4802No
77DEGS1DEGS1
Entrez,  Source
degenerative spermatocyte homolog 1, lipid desaturase (Drosophila)35810.0550.4806No
78ACADMACADM
Entrez,  Source
acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain37940.0500.4667No
79IMPA1IMPA1
Entrez,  Source
inositol(myo)-1(or 4)-monophosphatase 139080.0470.4601No
80HSD11B2HSD11B2
Entrez,  Source
hydroxysteroid (11-beta) dehydrogenase 243570.0370.4277No
81GBA2GBA2
Entrez,  Source
glucosidase, beta (bile acid) 244890.0340.4193No
82MBTPS2MBTPS2
Entrez,  Source
membrane-bound transcription factor peptidase, site 245850.0320.4134No
83CYP11A1CYP11A1
Entrez,  Source
cytochrome P450, family 11, subfamily A, polypeptide 146490.0310.4100No
84PLCB2PLCB2
Entrez,  Source
phospholipase C, beta 248670.0270.3947No
85PRDX6PRDX6
Entrez,  Source
peroxiredoxin 648830.0260.3947No
86NEU3NEU3
Entrez,  Source
sialidase 3 (membrane sialidase)48990.0260.3946No
87CELCEL
Entrez,  Source
carboxyl ester lipase (bile salt-stimulated lipase)50470.0230.3845No
88ACOT2ACOT2
Entrez,  Source
acyl-CoA thioesterase 251650.0210.3765No
89SULT2A1SULT2A1
Entrez,  Source
sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 151840.0210.3760No
90ABCD2ABCD2
Entrez,  Source
ATP-binding cassette, sub-family D (ALD), member 252160.0200.3745No
91ST8SIA5ST8SIA5
Entrez,  Source
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 552580.0200.3723No
92CPT1BCPT1B
Entrez,  Source
carnitine palmitoyltransferase 1B (muscle)52650.0190.3726No
93B4GALT4B4GALT4
Entrez,  Source
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 453350.0180.3682No
94SERINC2SERINC2
Entrez,  Source
serine incorporator 253400.0180.3686No
95UGCGUGCG
Entrez,  Source
UDP-glucose ceramide glucosyltransferase53840.0170.3661No
96ADIPOR2ADIPOR2
Entrez,  Source
adiponectin receptor 255060.0140.3576No
97PPARDPPARD
Entrez,  Source
peroxisome proliferative activated receptor, delta55320.0140.3563No
98PTGS1PTGS1
Entrez,  Source
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)55560.0140.3551No
99DHCR7DHCR7
Entrez,  Source
7-dehydrocholesterol reductase57280.0100.3426No
100SC4MOLSC4MOL
Entrez,  Source
sterol-C4-methyl oxidase-like58800.0080.3315No
101PTGDSPTGDS
Entrez,  Source
prostaglandin D2 synthase 21kDa (brain)59000.0070.3303No
102ASAH2ASAH2
Entrez,  Source
N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 260470.0040.3194No
103PCYT1BPCYT1B
Entrez,  Source
phosphate cytidylyltransferase 1, choline, beta62290.0010.3057No
104PTGESPTGES
Entrez,  Source
prostaglandin E synthase6415-0.0020.2918No
105IHPK1IHPK1
Entrez,  Source
inositol hexaphosphate kinase 16458-0.0030.2887No
106PI4K2A6643-0.0060.2750No
107CYP7B1CYP7B1
Entrez,  Source
cytochrome P450, family 7, subfamily B, polypeptide 17069-0.0140.2434No
108SPHK1SPHK1
Entrez,  Source
sphingosine kinase 17090-0.0140.2425No
109SOD1SOD1
Entrez,  Source
superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult))7093-0.0140.2429No
110FDXRFDXR
Entrez,  Source
ferredoxin reductase7183-0.0150.2368No
111STUB1STUB1
Entrez,  Source
STIP1 homology and U-box containing protein 17226-0.0160.2344No
112NPC2NPC2
Entrez,  Source
Niemann-Pick disease, type C27253-0.0170.2331No
113NR0B1NR0B1
Entrez,  Source
nuclear receptor subfamily 0, group B, member 17399-0.0200.2230No
114RDH11RDH11
Entrez,  Source
retinol dehydrogenase 11 (all-trans/9-cis/11-cis)7495-0.0220.2167No
115YWHAHYWHAH
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide7564-0.0230.2125No
116HADHBHADHB
Entrez,  Source
hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit7978-0.0310.1825No
117SERINC1SERINC1
Entrez,  Source
serine incorporator 18027-0.0320.1802No
118CD81CD81
Entrez,  Source
CD81 molecule8032-0.0320.1813No
119SHHSHH
Entrez,  Source
sonic hedgehog homolog (Drosophila)8114-0.0340.1766No
120CYP4F2CYP4F2
Entrez,  Source
cytochrome P450, family 4, subfamily F, polypeptide 28129-0.0340.1770No
121TNFRSF1ATNFRSF1A
Entrez,  Source
tumor necrosis factor receptor superfamily, member 1A8306-0.0370.1652No
122HSD3B7HSD3B7
Entrez,  Source
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 78340-0.0380.1644No
123AKR1B10AKR1B10
Entrez,  Source
aldo-keto reductase family 1, member B10 (aldose reductase)8361-0.0390.1645No
124SPTLC1SPTLC1
Entrez,  Source
serine palmitoyltransferase, long chain base subunit 18481-0.0410.1572No
125ST3GAL6ST3GAL6
Entrez,  Source
ST3 beta-galactoside alpha-2,3-sialyltransferase 68557-0.0430.1534No
126PNLIPRP2PNLIPRP2
Entrez,  Source
pancreatic lipase-related protein 28921-0.0500.1280No
127HDLBPHDLBP
Entrez,  Source
high density lipoprotein binding protein (vigilin)9423-0.0610.0926No
128PLA2G6PLA2G6
Entrez,  Source
phospholipase A2, group VI (cytosolic, calcium-independent)9476-0.0620.0914No
129PIP5K1APIP5K1A
Entrez,  Source
phosphatidylinositol-4-phosphate 5-kinase, type I, alpha9484-0.0630.0935No
130AGPAT6AGPAT6
Entrez,  Source
1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)9694-0.0680.0805No
131PLA2G2DPLA2G2D
Entrez,  Source
phospholipase A2, group IID9730-0.0690.0808No
132NR1H4NR1H4
Entrez,  Source
nuclear receptor subfamily 1, group H, member 49939-0.0750.0683No
133PIGCPIGC
Entrez,  Source
phosphatidylinositol glycan anchor biosynthesis, class C10365-0.0860.0397No
134SERINC5SERINC5
Entrez,  Source
serine incorporator 510779-0.1000.0127No
135ACOX3ACOX3
Entrez,  Source
acyl-Coenzyme A oxidase 3, pristanoyl10884-0.1040.0093No
136ADMADM
Entrez,  Source
adrenomedullin11063-0.1100.0005No
137BRCA1BRCA1
Entrez,  Source
breast cancer 1, early onset11096-0.1120.0029No
138PIK3R1PIK3R1
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 1 (p85 alpha)11304-0.121-0.0077No
139CNBPCNBP
Entrez,  Source
CCHC-type zinc finger, nucleic acid binding protein11520-0.130-0.0184No
140GNPATGNPAT
Entrez,  Source
glyceronephosphate O-acyltransferase11617-0.134-0.0199No
141IL4IL4
Entrez,  Source
interleukin 411640-0.135-0.0158No
142PLAAPLAA
Entrez,  Source
phospholipase A2-activating protein11873-0.149-0.0270No
143CLN3CLN3
Entrez,  Source
ceroid-lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)11907-0.150-0.0231No
144PTENPTEN
Entrez,  Source
phosphatase and tensin homolog (mutated in multiple advanced cancers 1)11925-0.152-0.0179No
145CROTCROT
Entrez,  Source
carnitine O-octanoyltransferase11938-0.152-0.0123No
146ST6GALNAC4ST6GALNAC4
Entrez,  Source
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 411980-0.156-0.0087No
147MIFMIF
Entrez,  Source
macrophage migration inhibitory factor (glycosylation-inhibiting factor)12291-0.179-0.0246No
148PPARAPPARA
Entrez,  Source
peroxisome proliferative activated receptor, alpha12405-0.189-0.0251No
149DHRS3DHRS3
Entrez,  Source
dehydrogenase/reductase (SDR family) member 312528-0.202-0.0257No
150PIGVPIGV
Entrez,  Source
phosphatidylinositol glycan anchor biosynthesis, class V12538-0.203-0.0177No
151AGPSAGPS
Entrez,  Source
alkylglycerone phosphate synthase13056-0.309-0.0437No
152SGPL1SGPL1
Entrez,  Source
sphingosine-1-phosphate lyase 113181-0.384-0.0366No
153SLC27A5SLC27A5
Entrez,  Source
solute carrier family 27 (fatty acid transporter), member 513261-0.509-0.0208No
154CD74CD74
Entrez,  Source
CD74 molecule, major histocompatibility complex, class II invariant chain13307-0.6290.0027No
Table: GSEA details [plain text format]



Fig 2: CELLULAR_LIPID_METABOLIC_PROCESS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CELLULAR_LIPID_METABOLIC_PROCESS: Random ES distribution   
Gene set null distribution of ES for CELLULAR_LIPID_METABOLIC_PROCESS