Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | CELL_GROWTH_AND_OR_MAINTENANCE |
| Enrichment Score (ES) | 0.6496175 |
| Normalized Enrichment Score (NES) | 1.9397719 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0085483305 |
| FWER p-Value | 0.346 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 3 | 1.622 | 0.2301 | Yes |
| 2 | CTGF | CTGF Entrez, Source | connective tissue growth factor | 37 | 0.888 | 0.3536 | Yes |
| 3 | COL5A2 | COL5A2 Entrez, Source | collagen, type V, alpha 2 | 61 | 0.759 | 0.4597 | Yes |
| 4 | CXCL1 | CXCL1 Entrez, Source | chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) | 474 | 0.294 | 0.4705 | Yes |
| 5 | RASD1 | RASD1 Entrez, Source | RAS, dexamethasone-induced 1 | 651 | 0.245 | 0.4921 | Yes |
| 6 | ERBB2 | ERBB2 Entrez, Source | v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) | 738 | 0.229 | 0.5181 | Yes |
| 7 | GPC3 | GPC3 Entrez, Source | glypican 3 | 757 | 0.224 | 0.5486 | Yes |
| 8 | HPN | HPN Entrez, Source | hepsin (transmembrane protease, serine 1) | 775 | 0.221 | 0.5787 | Yes |
| 9 | PCOLCE | PCOLCE Entrez, Source | procollagen C-endopeptidase enhancer | 804 | 0.213 | 0.6067 | Yes |
| 10 | IER3 | IER3 Entrez, Source | immediate early response 3 | 908 | 0.195 | 0.6266 | Yes |
| 11 | PPAP2B | PPAP2B Entrez, Source | phosphatidic acid phosphatase type 2B | 1157 | 0.164 | 0.6313 | Yes |
| 12 | IL6R | IL6R Entrez, Source | interleukin 6 receptor | 1216 | 0.160 | 0.6496 | Yes |
| 13 | SMO | SMO Entrez, Source | smoothened homolog (Drosophila) | 1625 | 0.127 | 0.6369 | No |
| 14 | PPAP2A | PPAP2A Entrez, Source | phosphatidic acid phosphatase type 2A | 2313 | 0.095 | 0.5988 | No |
| 15 | TFF1 | TFF1 Entrez, Source | trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) | 2482 | 0.089 | 0.5987 | No |
| 16 | LECT1 | LECT1 Entrez, Source | leukocyte cell derived chemotaxin 1 | 2996 | 0.071 | 0.5703 | No |
| 17 | TACC3 | TACC3 Entrez, Source | transforming, acidic coiled-coil containing protein 3 | 3823 | 0.050 | 0.5152 | No |
| 18 | JAK3 | JAK3 Entrez, Source | Janus kinase 3 (a protein tyrosine kinase, leukocyte) | 4329 | 0.037 | 0.4825 | No |
| 19 | OS-9 | 4547 | 0.033 | 0.4709 | No | ||
| 20 | RHCG | RHCG Entrez, Source | Rh family, C glycoprotein | 5492 | 0.015 | 0.4020 | No |
| 21 | EXTL3 | EXTL3 Entrez, Source | exostoses (multiple)-like 3 | 5780 | 0.009 | 0.3818 | No |
| 22 | TRPM1 | TRPM1 Entrez, Source | transient receptor potential cation channel, subfamily M, member 1 | 6043 | 0.004 | 0.3627 | No |
| 23 | LGALS7 | LGALS7 Entrez, Source | lectin, galactoside-binding, soluble, 7 (galectin 7) | 6454 | -0.003 | 0.3323 | No |
| 24 | MTM1 | MTM1 Entrez, Source | myotubularin 1 | 6543 | -0.005 | 0.3263 | No |
| 25 | GATA2 | GATA2 Entrez, Source | GATA binding protein 2 | 6947 | -0.011 | 0.2977 | No |
| 26 | INHBA | INHBA Entrez, Source | inhibin, beta A (activin A, activin AB alpha polypeptide) | 7768 | -0.027 | 0.2398 | No |
| 27 | DUSP12 | DUSP12 Entrez, Source | dual specificity phosphatase 12 | 8847 | -0.049 | 0.1657 | No |
| 28 | GNA12 | GNA12 Entrez, Source | guanine nucleotide binding protein (G protein) alpha 12 | 8878 | -0.049 | 0.1705 | No |
| 29 | ANGPT2 | ANGPT2 Entrez, Source | angiopoietin 2 | 8929 | -0.050 | 0.1739 | No |
| 30 | FGF5 | FGF5 Entrez, Source | fibroblast growth factor 5 | 9095 | -0.054 | 0.1691 | No |
| 31 | DNAJA3 | DNAJA3 Entrez, Source | DnaJ (Hsp40) homolog, subfamily A, member 3 | 9298 | -0.058 | 0.1622 | No |
| 32 | QSCN6 | QSCN6 Entrez, Source | quiescin Q6 | 10424 | -0.088 | 0.0901 | No |
| 33 | NF1 | NF1 Entrez, Source | neurofibromin 1 (neurofibromatosis, von Recklinghausen disease, Watson disease) | 10565 | -0.092 | 0.0927 | No |
| 34 | CCL4 | CCL4 Entrez, Source | chemokine (C-C motif) ligand 4 | 11087 | -0.111 | 0.0693 | No |
| 35 | EIF3S6 | EIF3S6 Entrez, Source | eukaryotic translation initiation factor 3, subunit 6 48kDa | 11118 | -0.113 | 0.0831 | No |
| 36 | INSR | INSR Entrez, Source | insulin receptor | 11154 | -0.115 | 0.0968 | No |
| 37 | DDX1 | DDX1 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 | 11603 | -0.133 | 0.0820 | No |
| 38 | PLAU | PLAU Entrez, Source | plasminogen activator, urokinase | 12137 | -0.167 | 0.0657 | No |
| 39 | STMN1 | STMN1 Entrez, Source | stathmin 1/oncoprotein 18 | 12244 | -0.175 | 0.0825 | No |
