Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | CMV_24HRS_DN |
| Enrichment Score (ES) | 0.5394098 |
| Normalized Enrichment Score (NES) | 1.7077339 |
| Nominal p-value | 0.0052724076 |
| FDR q-value | 0.05274477 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 12 | 1.254 | 0.1320 | Yes |
| 2 | ANXA1 | ANXA1 Entrez, Source | annexin A1 | 25 | 0.995 | 0.2365 | Yes |
| 3 | COL3A1 | COL3A1 Entrez, Source | collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) | 43 | 0.843 | 0.3246 | Yes |
| 4 | COL5A2 | COL5A2 Entrez, Source | collagen, type V, alpha 2 | 61 | 0.759 | 0.4038 | Yes |
| 5 | CFD | CFD Entrez, Source | complement factor D (adipsin) | 286 | 0.410 | 0.4304 | Yes |
| 6 | CCND1 | CCND1 Entrez, Source | cyclin D1 | 391 | 0.341 | 0.4587 | Yes |
| 7 | COL1A1 | COL1A1 Entrez, Source | collagen, type I, alpha 1 | 525 | 0.277 | 0.4781 | Yes |
| 8 | COL6A2 | COL6A2 Entrez, Source | collagen, type VI, alpha 2 | 579 | 0.262 | 0.5018 | Yes |
| 9 | LAMB2 | LAMB2 Entrez, Source | laminin, beta 2 (laminin S) | 590 | 0.260 | 0.5286 | Yes |
| 10 | SULT1E1 | SULT1E1 Entrez, Source | sulfotransferase family 1E, estrogen-preferring, member 1 | 909 | 0.194 | 0.5253 | Yes |
| 11 | PTGIS | PTGIS Entrez, Source | prostaglandin I2 (prostacyclin) synthase | 1107 | 0.170 | 0.5284 | Yes |
| 12 | IGF2 | IGF2 Entrez, Source | insulin-like growth factor 2 (somatomedin A) | 1190 | 0.162 | 0.5394 | Yes |
| 13 | TIMP3 | TIMP3 Entrez, Source | TIMP metallopeptidase inhibitor 3 (Sorsby fundus dystrophy, pseudoinflammatory) | 1445 | 0.139 | 0.5350 | No |
| 14 | TGFBR3 | TGFBR3 Entrez, Source | transforming growth factor, beta receptor III (betaglycan, 300kDa) | 1932 | 0.110 | 0.5102 | No |
| 15 | DDR2 | DDR2 Entrez, Source | discoidin domain receptor family, member 2 | 2021 | 0.107 | 0.5148 | No |
| 16 | SGCG | SGCG Entrez, Source | sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) | 2335 | 0.094 | 0.5012 | No |
| 17 | CRHBP | CRHBP Entrez, Source | corticotropin releasing hormone binding protein | 2567 | 0.085 | 0.4928 | No |
| 18 | EFEMP1 | EFEMP1 Entrez, Source | EGF-containing fibulin-like extracellular matrix protein 1 | 3378 | 0.061 | 0.4383 | No |
| 19 | ACO1 | ACO1 Entrez, Source | aconitase 1, soluble | 3462 | 0.059 | 0.4383 | No |
| 20 | CXCR7 | CXCR7 Entrez, Source | chemokine (C-X-C motif) receptor 7 | 3489 | 0.058 | 0.4425 | No |
| 21 | EPO | EPO Entrez, Source | erythropoietin | 3577 | 0.055 | 0.4418 | No |
| 22 | IGF1R | IGF1R Entrez, Source | insulin-like growth factor 1 receptor | 3890 | 0.048 | 0.4234 | No |
| 23 | CDH11 | CDH11 Entrez, Source | cadherin 11, type 2, OB-cadherin (osteoblast) | 3983 | 0.045 | 0.4212 | No |
| 24 | BCL2 | BCL2 Entrez, Source | B-cell CLL/lymphoma 2 | 4187 | 0.040 | 0.4102 | No |
| 25 | PDGFRA | PDGFRA Entrez, Source | platelet-derived growth factor receptor, alpha polypeptide | 4352 | 0.037 | 0.4017 | No |
| 26 | THBS2 | THBS2 Entrez, Source | thrombospondin 2 | 4738 | 0.029 | 0.3759 | No |
| 27 | ACTA2 | ACTA2 Entrez, Source | actin, alpha 2, smooth muscle, aorta | 4827 | 0.027 | 0.3722 | No |
| 28 | TPM1 | TPM1 Entrez, Source | tropomyosin 1 (alpha) | 6293 | -0.000 | 0.2619 | No |
| 29 | IGFBP5 | IGFBP5 Entrez, Source | insulin-like growth factor binding protein 5 | 6450 | -0.003 | 0.2505 | No |
| 30 | RAB13 | RAB13 Entrez, Source | RAB13, member RAS oncogene family | 7013 | -0.013 | 0.2095 | No |
| 31 | CYP1B1 | CYP1B1 Entrez, Source | cytochrome P450, family 1, subfamily B, polypeptide 1 | 7236 | -0.017 | 0.1946 | No |
| 32 | CHN1 | CHN1 Entrez, Source | chimerin (chimaerin) 1 | 7718 | -0.026 | 0.1611 | No |
| 33 | CSPG2 | CSPG2 Entrez, Source | chondroitin sulfate proteoglycan 2 (versican) | 7897 | -0.029 | 0.1508 | No |
| 34 | TNFRSF1A | TNFRSF1A Entrez, Source | tumor necrosis factor receptor superfamily, member 1A | 8306 | -0.037 | 0.1240 | No |
| 35 | ADRA2A | ADRA2A Entrez, Source | adrenergic, alpha-2A-, receptor | 8442 | -0.040 | 0.1181 | No |
| 36 | MATK | MATK Entrez, Source | megakaryocyte-associated tyrosine kinase | 8917 | -0.050 | 0.0878 | No |
| 37 | AHR | AHR Entrez, Source | aryl hydrocarbon receptor | 9118 | -0.054 | 0.0785 | No |
| 38 | HIVEP2 | HIVEP2 Entrez, Source | human immunodeficiency virus type I enhancer binding protein 2 | 9351 | -0.059 | 0.0673 | No |
| 39 | NR3C1 | NR3C1 Entrez, Source | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | 9848 | -0.072 | 0.0377 | No |
| 40 | PABPC1 | PABPC1 Entrez, Source | poly(A) binding protein, cytoplasmic 1 | 10349 | -0.086 | 0.0092 | No |
| 41 | C1R | C1R Entrez, Source | complement component 1, r subcomponent | 10455 | -0.089 | 0.0107 | No |
| 42 | ANPEP | ANPEP Entrez, Source | alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150) | 10917 | -0.106 | -0.0128 | No |
| 43 | ADM | ADM Entrez, Source | adrenomedullin | 11063 | -0.110 | -0.0120 | No |
| 44 | ID2 | ID2 Entrez, Source | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | 11229 | -0.117 | -0.0120 | No |
| 45 | TSPAN6 | TSPAN6 Entrez, Source | tetraspanin 6 | 11653 | -0.136 | -0.0295 | No |
| 46 | PAFAH1B1 | PAFAH1B1 Entrez, Source | platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa | 11805 | -0.145 | -0.0255 | No |
| 47 | WEE1 | WEE1 Entrez, Source | WEE1 homolog (S. pombe) | 11948 | -0.154 | -0.0199 | No |
| 48 | MBL2 | MBL2 Entrez, Source | mannose-binding lectin (protein C) 2, soluble (opsonic defect) | 11957 | -0.154 | -0.0042 | No |
| 49 | GPX1 | GPX1 Entrez, Source | glutathione peroxidase 1 | 12098 | -0.164 | 0.0026 | No |
| 50 | CXCL12 | CXCL12 Entrez, Source | chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) | 12188 | -0.170 | 0.0140 | No |
| 51 | RUNX1 | RUNX1 Entrez, Source | runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) | 12547 | -0.204 | 0.0087 | No |
| 52 | HSD17B2 | HSD17B2 Entrez, Source | hydroxysteroid (17-beta) dehydrogenase 2 | 12550 | -0.204 | 0.0302 | No |
| 53 | SERPINE1 | SERPINE1 Entrez, Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 12951 | -0.277 | 0.0294 | No |
