Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | CMV_IE86_UP |
| Enrichment Score (ES) | -0.594259 |
| Normalized Enrichment Score (NES) | -1.7207093 |
| Nominal p-value | 0.0021141649 |
| FDR q-value | 0.0879848 |
| FWER p-Value | 0.987 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | BARD1 | BARD1 Entrez, Source | BRCA1 associated RING domain 1 | 1511 | 0.134 | -0.0756 | No |
| 2 | KIAA0101 | KIAA0101 Entrez, Source | KIAA0101 | 2376 | 0.093 | -0.1144 | No |
| 3 | TMEM106C | TMEM106C Entrez, Source | transmembrane protein 106C | 2557 | 0.085 | -0.1038 | No |
| 4 | DHFR | DHFR Entrez, Source | dihydrofolate reductase | 2681 | 0.081 | -0.0903 | No |
| 5 | CCNE1 | CCNE1 Entrez, Source | cyclin E1 | 3049 | 0.070 | -0.0981 | No |
| 6 | RAB27A | RAB27A Entrez, Source | RAB27A, member RAS oncogene family | 3739 | 0.051 | -0.1354 | No |
| 7 | PTTG1 | PTTG1 Entrez, Source | pituitary tumor-transforming 1 | 4488 | 0.034 | -0.1819 | No |
| 8 | CASP3 | CASP3 Entrez, Source | caspase 3, apoptosis-related cysteine peptidase | 4606 | 0.032 | -0.1817 | No |
| 9 | MSH2 | MSH2 Entrez, Source | mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) | 5162 | 0.021 | -0.2174 | No |
| 10 | FOXM1 | FOXM1 Entrez, Source | forkhead box M1 | 5218 | 0.020 | -0.2159 | No |
| 11 | BTG3 | BTG3 Entrez, Source | BTG family, member 3 | 5592 | 0.013 | -0.2403 | No |
| 12 | POLD3 | POLD3 Entrez, Source | polymerase (DNA-directed), delta 3, accessory subunit | 6034 | 0.005 | -0.2721 | No |
| 13 | CSPG5 | CSPG5 Entrez, Source | chondroitin sulfate proteoglycan 5 (neuroglycan C) | 8937 | -0.051 | -0.4758 | No |
| 14 | H2AFX | H2AFX Entrez, Source | H2A histone family, member X | 9093 | -0.054 | -0.4722 | No |
| 15 | UNG | UNG Entrez, Source | uracil-DNA glycosylase | 9382 | -0.060 | -0.4769 | No |
| 16 | UMPS | UMPS Entrez, Source | uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5'-decarboxylase) | 9665 | -0.067 | -0.4792 | No |
| 17 | TYMS | TYMS Entrez, Source | thymidylate synthetase | 9675 | -0.067 | -0.4608 | No |
| 18 | PCNA | PCNA Entrez, Source | proliferating cell nuclear antigen | 11449 | -0.127 | -0.5581 | Yes |
| 19 | RFC2 | RFC2 Entrez, Source | replication factor C (activator 1) 2, 40kDa | 11931 | -0.152 | -0.5514 | Yes |
| 20 | TFAM | TFAM Entrez, Source | transcription factor A, mitochondrial | 11975 | -0.156 | -0.5107 | Yes |
| 21 | RFC3 | RFC3 Entrez, Source | replication factor C (activator 1) 3, 38kDa | 12712 | -0.226 | -0.5022 | Yes |
| 22 | NASP | NASP Entrez, Source | nuclear autoantigenic sperm protein (histone-binding) | 12994 | -0.291 | -0.4411 | Yes |
| 23 | MCM7 | MCM7 Entrez, Source | MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) | 13101 | -0.328 | -0.3566 | Yes |
| 24 | SLC29A1 | SLC29A1 Entrez, Source | solute carrier family 29 (nucleoside transporters), member 1 | 13130 | -0.345 | -0.2613 | Yes |
| 25 | DCK | DCK Entrez, Source | deoxycytidine kinase | 13222 | -0.428 | -0.1473 | Yes |
| 26 | MCM6 | MCM6 Entrez, Source | MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) | 13288 | -0.553 | 0.0041 | Yes |
