Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | CROONQUIST_RAS_STROMA_DN |
| Enrichment Score (ES) | 0.8508333 |
| Normalized Enrichment Score (NES) | 2.1075108 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0014640692 |
| FWER p-Value | 0.02 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 3 | 1.622 | 0.2268 | Yes |
| 2 | IGFBP7 | IGFBP7 Entrez, Source | insulin-like growth factor binding protein 7 | 11 | 1.276 | 0.4049 | Yes |
| 3 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 12 | 1.254 | 0.5804 | Yes |
| 4 | CTGF | CTGF Entrez, Source | connective tissue growth factor | 37 | 0.888 | 0.7028 | Yes |
| 5 | GJA1 | GJA1 Entrez, Source | gap junction protein, alpha 1, 43kDa (connexin 43) | 316 | 0.387 | 0.7361 | Yes |
| 6 | TMSB4X | TMSB4X Entrez, Source | thymosin, beta 4, X-linked | 342 | 0.369 | 0.7858 | Yes |
| 7 | SPARC | SPARC Entrez, Source | secreted protein, acidic, cysteine-rich (osteonectin) | 480 | 0.292 | 0.8164 | Yes |
| 8 | IGFBP3 | IGFBP3 Entrez, Source | insulin-like growth factor binding protein 3 | 533 | 0.274 | 0.8508 | Yes |
| 9 | NUPR1 | NUPR1 Entrez, Source | - | 1018 | 0.180 | 0.8397 | No |
| 10 | DUSP1 | DUSP1 Entrez, Source | dual specificity phosphatase 1 | 1266 | 0.154 | 0.8428 | No |
| 11 | SULF1 | SULF1 Entrez, Source | sulfatase 1 | 1735 | 0.120 | 0.8245 | No |
| 12 | TGFBI | TGFBI Entrez, Source | transforming growth factor, beta-induced, 68kDa | 4125 | 0.042 | 0.6511 | No |
| 13 | ACTA2 | ACTA2 Entrez, Source | actin, alpha 2, smooth muscle, aorta | 4827 | 0.027 | 0.6024 | No |
| 14 | IL6 | IL6 Entrez, Source | interleukin 6 (interferon, beta 2) | 5285 | 0.019 | 0.5707 | No |
| 15 | CD81 | CD81 Entrez, Source | CD81 molecule | 8032 | -0.032 | 0.3691 | No |
| 16 | NR4A2 | NR4A2 Entrez, Source | nuclear receptor subfamily 4, group A, member 2 | 12585 | -0.209 | 0.0568 | No |
