Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_24h.class.cls
#double_gel_8d_versus_double_gel_24h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in classdouble_gel_8d
GeneSetESR_FIBROBLAST_UP
Enrichment Score (ES)0.6638301
Normalized Enrichment Score (NES)1.9076407
Nominal p-value0.0
FDR q-value0.011573824
FWER p-Value0.498
Table: GSEA Results Summary



Fig 1: Enrichment plot: ESR_FIBROBLAST_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1VIMVIM
Entrez,  Source
vimentin71.3910.1961Yes
2ANXA1ANXA1
Entrez,  Source
annexin A1250.9950.3355Yes
3CTGFCTGF
Entrez,  Source
connective tissue growth factor370.8880.4602Yes
4COL3A1COL3A1
Entrez,  Source
collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)430.8430.5790Yes
5CXCL2CXCL2
Entrez,  Source
chemokine (C-X-C motif) ligand 22180.4710.6326Yes
6IGFBP3IGFBP3
Entrez,  Source
insulin-like growth factor binding protein 35330.2740.6477Yes
7NGFRAP1NGFRAP1
Entrez,  Source
nerve growth factor receptor (TNFRSF16) associated protein 18300.2080.6548Yes
8FN1FN1
Entrez,  Source
fibronectin 112460.1560.6458Yes
9EFNB1EFNB1
Entrez,  Source
ephrin-B117700.1180.6232Yes
10DAXXDAXX
Entrez,  Source
death-associated protein 617960.1170.6379Yes
11ARPC1BARPC1B
Entrez,  Source
actin related protein 2/3 complex, subunit 1B, 41kDa18720.1130.6482Yes
12FGFR4FGFR4
Entrez,  Source
fibroblast growth factor receptor 419240.1110.6601Yes
13RHOBRHOB
Entrez,  Source
ras homolog gene family, member B20720.1050.6638Yes
14MARK3MARK3
Entrez,  Source
MAP/microtubule affinity-regulating kinase 331130.0680.5953No
15CYCSCYCS
Entrez,  Source
cytochrome c, somatic32560.0640.5937No
16FLOT1FLOT1
Entrez,  Source
flotillin 136930.0520.5683No
17PRDX4PRDX4
Entrez,  Source
peroxiredoxin 449530.0250.4773No
18UGCGUGCG
Entrez,  Source
UDP-glucose ceramide glucosyltransferase53840.0170.4474No
19TBCATBCA
Entrez,  Source
tubulin-specific chaperone a55810.0130.4345No
20AKAP12AKAP12
Entrez,  Source
A kinase (PRKA) anchor protein (gravin) 1257160.0110.4260No
21BNIP3LBNIP3L
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 3-like57290.0100.4265No
22ATP5IATP5I
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E57930.0090.4231No
23EIF4EEIF4E
Entrez,  Source
eukaryotic translation initiation factor 4E6696-0.0070.3563No
24SOD1SOD1
Entrez,  Source
superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult))7093-0.0140.3285No
25ZFP36L1ZFP36L1
Entrez,  Source
zinc finger protein 36, C3H type-like 17346-0.0190.3122No
26OAZ1OAZ1
Entrez,  Source
ornithine decarboxylase antizyme 18028-0.0320.2655No
27CTCFCTCF
Entrez,  Source
CCCTC-binding factor (zinc finger protein)8374-0.0390.2451No
28HGFHGF
Entrez,  Source
hepatocyte growth factor (hepapoietin A; scatter factor)8951-0.0510.2090No
29GOLPH3GOLPH3
Entrez,  Source
golgi phosphoprotein 3 (coat-protein)9662-0.0670.1652No
30TPRTPR
Entrez,  Source
translocated promoter region (to activated MET oncogene)10142-0.0800.1405No
31EIF3S6IPEIF3S6IP
Entrez,  Source
eukaryotic translation initiation factor 3, subunit 6 interacting protein10566-0.0920.1218No
32TXNRD2TXNRD2
Entrez,  Source
thioredoxin reductase 210598-0.0930.1326No
33NDRG1NDRG1
Entrez,  Source
N-myc downstream regulated gene 113268-0.5190.0056No
Table: GSEA details [plain text format]



Fig 2: ESR_FIBROBLAST_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ESR_FIBROBLAST_UP: Random ES distribution   
Gene set null distribution of ES for ESR_FIBROBLAST_UP