Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_24h.class.cls
#double_gel_8d_versus_double_gel_24h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in classdouble_gel_24h
GeneSetGCCATNTTG_V$YY1_Q6
Enrichment Score (ES)-0.342438
Normalized Enrichment Score (NES)-1.4263084
Nominal p-value0.0
FDR q-value0.26920545
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GCCATNTTG_V$YY1_Q6   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CCND2CCND2
Entrez,  Source
cyclin D2211.0390.0523No
2RAPGEF4RAPGEF4
Entrez,  Source
Rap guanine nucleotide exchange factor (GEF) 43330.3730.0480No
3LPHN1LPHN1
Entrez,  Source
latrophilin 16670.2420.0353No
4NCDNNCDN
Entrez,  Source
neurochondrin8090.2120.0355No
5FOXP1FOXP1
Entrez,  Source
forkhead box P18330.2070.0446No
6DUSP7DUSP7
Entrez,  Source
dual specificity phosphatase 79700.1860.0439No
7IDH3GIDH3G
Entrez,  Source
isocitrate dehydrogenase 3 (NAD+) gamma11350.1670.0401No
8CD4CD4
Entrez,  Source
CD4 molecule13150.1490.0342No
9SFXN1SFXN1
Entrez,  Source
sideroflexin 113840.1440.0365No
10VIL2VIL2
Entrez,  Source
villin 2 (ezrin)14090.1420.0421No
11SCRN1SCRN1
Entrez,  Source
secernin 115070.1340.0417No
12ZFP37ZFP37
Entrez,  Source
zinc finger protein 37 homolog (mouse)15430.1320.0459No
13GNAI2GNAI2
Entrez,  Source
guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 215850.1290.0494No
14NUDT3NUDT3
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 315870.1290.0561No
15COX8ACOX8A
Entrez,  Source
cytochrome c oxidase subunit 8A (ubiquitous)15970.1280.0620No
16FKRPFKRP
Entrez,  Source
fukutin related protein16350.1260.0658No
17COX7BCOX7B
Entrez,  Source
cytochrome c oxidase subunit VIIb17470.1190.0635No
18PPP2CAPPP2CA
Entrez,  Source
protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform17900.1170.0664No
19DZIP1DZIP1
Entrez,  Source
DAZ interacting protein 119600.1090.0593No
20ABHD1ABHD1
Entrez,  Source
abhydrolase domain containing 119640.1090.0647No
21CACNB2CACNB2
Entrez,  Source
calcium channel, voltage-dependent, beta 2 subunit19940.1080.0681No
22APBB1APBB1
Entrez,  Source
amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)23720.0930.0443No
23DSCAMDSCAM
Entrez,  Source
Down syndrome cell adhesion molecule23850.0920.0481No
24HOXA2HOXA2
Entrez,  Source
homeobox A224030.0920.0516No
25TIA1TIA1
Entrez,  Source
TIA1 cytotoxic granule-associated RNA binding protein24490.0900.0528No
26UQCRHUQCRH
Entrez,  Source
ubiquinol-cytochrome c reductase hinge protein24940.0880.0541No
27AGPAT1AGPAT1
Entrez,  Source
1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)25100.0880.0575No
28DGCR2DGCR2
Entrez,  Source
DiGeorge syndrome critical region gene 226020.0830.0549No
29RAB4BRAB4B
Entrez,  Source
RAB4B, member RAS oncogene family26460.0820.0559No
30ING3ING3
Entrez,  Source
inhibitor of growth family, member 326960.0800.0563No
31PITX1PITX1
Entrez,  Source
paired-like homeodomain transcription factor 127730.0780.0546No
32OTX2OTX2
Entrez,  Source
orthodenticle homolog 2 (Drosophila)28310.0760.0542No
33MARK3MARK3
Entrez,  Source
MAP/microtubule affinity-regulating kinase 331130.0680.0364No
34ADKADK
Entrez,  Source
adenosine kinase31560.0670.0367No
35SNX17SNX17
Entrez,  Source
sorting nexin 1731690.0670.0392No
36CDKN1BCDKN1B
Entrez,  Source
cyclin-dependent kinase inhibitor 1B (p27, Kip1)32020.0660.0402No
37RAB28RAB28
Entrez,  Source
RAB28, member RAS oncogene family33860.0610.0294No
38AIPAIP
Entrez,  Source
aryl hydrocarbon receptor interacting protein34060.0600.0311No
39RUFY1RUFY1
Entrez,  Source
RUN and FYVE domain containing 134690.0590.0294No
40HIF1AHIF1A
Entrez,  Source
hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)37150.0520.0135No
41ARF1ARF1
Entrez,  Source
ADP-ribosylation factor 137320.0510.0150No
42MAP2K5MAP2K5
Entrez,  Source
mitogen-activated protein kinase kinase 537620.0510.0154No
43BAMBIBAMBI
Entrez,  Source
BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)40350.044-0.0030No
44CUGBP1CUGBP1
Entrez,  Source
CUG triplet repeat, RNA binding protein 140490.043-0.0017No
45WASLWASL
Entrez,  Source
Wiskott-Aldrich syndrome-like42300.039-0.0134No
46BTRCBTRC
Entrez,  Source
beta-transducin repeat containing43160.037-0.0179No
47ATRXATRX
Entrez,  Source
alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)45480.033-0.0338No
48TAX1BP3TAX1BP3
Entrez,  Source
Tax1 (human T-cell leukemia virus type I) binding protein 346140.032-0.0371No
49SLC6A1SLC6A1
Entrez,  Source
solute carrier family 6 (neurotransmitter transporter, GABA), member 147660.029-0.0470No
50ATP5F1ATP5F1
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B148250.028-0.0500No
51ATP5A1ATP5A1
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle48840.026-0.0531No
52SYT11SYT11
Entrez,  Source
synaptotagmin XI49180.026-0.0542No
53TSC1TSC1
Entrez,  Source
tuberous sclerosis 149920.024-0.0585No
54PPP1CCPPP1CC
Entrez,  Source
protein phosphatase 1, catalytic subunit, gamma isoform49960.024-0.0575No
55PAPOLBPAPOLB
Entrez,  Source
poly(A) polymerase beta (testis specific)51310.022-0.0666No
56TGIFTGIF
Entrez,  Source
TGFB-induced factor (TALE family homeobox)53780.017-0.0844No
57CD164CD164
Entrez,  Source
CD164 molecule, sialomucin55090.014-0.0935No
58MPDU1MPDU1
Entrez,  Source
mannose-P-dolichol utilization defect 155780.013-0.0980No
59ATP5G1ATP5G1
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)56040.013-0.0992No
60THRAP4THRAP4
Entrez,  Source
thyroid hormone receptor associated protein 457110.011-0.1067No
61PDE4DPDE4D
Entrez,  Source
phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila)58900.007-0.1199No
62ARCN1ARCN1
Entrez,  Source
archain 159110.007-0.1210No
63USP14USP14
Entrez,  Source
ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)59280.007-0.1219No
64NAPE-PLDNAPE-PLD
Entrez,  Source
-60330.005-0.1296No
65PFN2PFN2
Entrez,  Source
profilin 262810.000-0.1483No
66ATF4ATF4
Entrez,  Source
activating transcription factor 4 (tax-responsive enhancer element B67)6295-0.000-0.1493No
67TCF4TCF4
Entrez,  Source
transcription factor 46338-0.001-0.1525No
68GNAO1GNAO1
Entrez,  Source
guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O6475-0.003-0.1627No
69USF1USF1
Entrez,  Source
upstream transcription factor 16510-0.004-0.1650No
70NR2C2NR2C2
Entrez,  Source
nuclear receptor subfamily 2, group C, member 26511-0.004-0.1648No
71SSR4SSR4
Entrez,  Source
signal sequence receptor, delta (translocon-associated protein delta)6586-0.005-0.1702No
72ATP6V0CATP6V0C
Entrez,  Source
ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c6588-0.005-0.1700No
73TAF6TAF6
Entrez,  Source
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa6603-0.006-0.1708No
74NFYCNFYC
Entrez,  Source
nuclear transcription factor Y, gamma6617-0.006-0.1714No
75RAB1ARAB1A
Entrez,  Source
RAB1A, member RAS oncogene family6729-0.008-0.1795No
76MAEAMAEA
Entrez,  Source
macrophage erythroblast attacher7146-0.015-0.2103No
77NFYANFYA
Entrez,  Source
nuclear transcription factor Y, alpha7202-0.016-0.2137No
78DAP3DAP3
Entrez,  Source
death associated protein 37418-0.020-0.2290No
79U2AF2U2AF2
Entrez,  Source
U2 small nuclear RNA auxiliary factor 27498-0.022-0.2338No
80RBMS1RBMS1
Entrez,  Source
RNA binding motif, single stranded interacting protein 17645-0.024-0.2437No
81NSFNSF
Entrez,  Source
N-ethylmaleimide-sensitive factor7733-0.026-0.2489No
82PSMC5PSMC5
Entrez,  Source
proteasome (prosome, macropain) 26S subunit, ATPase, 57735-0.026-0.2477No
83MRPL11MRPL11
Entrez,  Source
mitochondrial ribosomal protein L117805-0.027-0.2515No
84ENSAENSA
Entrez,  Source
endosulfine alpha8038-0.032-0.2674No
85AP3D1AP3D1
Entrez,  Source
adaptor-related protein complex 3, delta 1 subunit8055-0.032-0.2670No
86EIF2B4EIF2B4
Entrez,  Source
eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa8097-0.033-0.2684No
87LYPLA2LYPLA2
Entrez,  Source
lysophospholipase II8179-0.035-0.2727No
88RAB5ARAB5A
Entrez,  Source
RAB5A, member RAS oncogene family8227-0.036-0.2744No
89NDUFS1NDUFS1
Entrez,  Source
NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)8263-0.037-0.2752No
90KCNMA1KCNMA1
Entrez,  Source
potassium large conductance calcium-activated channel, subfamily M, alpha member 18304-0.037-0.2763No
91MTMR3MTMR3
Entrez,  Source
myotubularin related protein 38330-0.038-0.2762No
92STRN3STRN3
Entrez,  Source
striatin, calmodulin binding protein 38342-0.038-0.2751No
93CTCFCTCF
Entrez,  Source
CCCTC-binding factor (zinc finger protein)8374-0.039-0.2754No
94CELSR3CELSR3
Entrez,  Source
cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)8453-0.040-0.2792No
95ANAPC4ANAPC4
Entrez,  Source
anaphase promoting complex subunit 48515-0.042-0.2817No
96RXRBRXRB
Entrez,  Source
retinoid X receptor, beta8532-0.042-0.2807No
97HSF1HSF1
Entrez,  Source
heat shock transcription factor 18539-0.042-0.2790No
98UBCUBC
Entrez,  Source
ubiquitin C8543-0.042-0.2770No
99YWHAEYWHAE
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide8704-0.045-0.2868No
100RPN1RPN1
Entrez,  Source
ribophorin I8815-0.048-0.2927No
101RPL10RPL10
Entrez,  Source
ribosomal protein L108855-0.049-0.2931No
102PPP2R2APPP2R2A
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform8961-0.051-0.2984No
103GIT2GIT2
Entrez,  Source
G protein-coupled receptor kinase interactor 28964-0.051-0.2959No
104SHANK2SHANK2
Entrez,  Source
SH3 and multiple ankyrin repeat domains 29084-0.054-0.3022No
105MLL5MLL5
Entrez,  Source
myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)9119-0.054-0.3020No
106RAB10RAB10
Entrez,  Source
RAB10, member RAS oncogene family9126-0.055-0.2996No
107PIAS3PIAS3
Entrez,  Source
protein inhibitor of activated STAT, 39188-0.056-0.3013No
108GRIN2BGRIN2B
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2B9200-0.056-0.2993No
109L3MBTL2L3MBTL2
Entrez,  Source
l(3)mbt-like 2 (Drosophila)9242-0.057-0.2994No
110SFRS7SFRS7
Entrez,  Source
splicing factor, arginine/serine-rich 7, 35kDa9277-0.058-0.2990No
111SFRS5SFRS5
Entrez,  Source
splicing factor, arginine/serine-rich 59303-0.058-0.2979No
112HSPA8HSPA8
Entrez,  Source
heat shock 70kDa protein 89449-0.062-0.3057No
113DDX3XDDX3X
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked9594-0.065-0.3133No
114UBAP1UBAP1
Entrez,  Source
ubiquitin associated protein 19635-0.066-0.3129No
115RPS8RPS8
Entrez,  Source
ribosomal protein S89640-0.066-0.3097No
116TTC17TTC17
Entrez,  Source
tetratricopeptide repeat domain 179894-0.074-0.3252No
117PHF12PHF12
Entrez,  Source
PHD finger protein 129978-0.076-0.3275No
118PTBP1PTBP1
Entrez,  Source
polypyrimidine tract binding protein 110089-0.079-0.3318No
119RBM5RBM5
Entrez,  Source
RNA binding motif protein 510207-0.082-0.3364No
120SP1SP1
Entrez,  Source
Sp1 transcription factor10287-0.084-0.3381Yes
121WSB1WSB1
Entrez,  Source
WD repeat and SOCS box-containing 110301-0.084-0.3347Yes
122UBA52UBA52
Entrez,  Source
ubiquitin A-52 residue ribosomal protein fusion product 110338-0.086-0.3330Yes
123ATF1ATF1
Entrez,  Source
activating transcription factor 110381-0.087-0.3317Yes
124CAB39LCAB39L
Entrez,  Source
calcium binding protein 39-like10463-0.089-0.3332Yes
125UGCGL1UGCGL1
Entrez,  Source
UDP-glucose ceramide glucosyltransferase-like 110515-0.091-0.3324Yes
126LMNB1LMNB1
Entrez,  Source
lamin B110524-0.091-0.3283Yes
127NCOA6NCOA6
Entrez,  Source
nuclear receptor coactivator 610541-0.091-0.3247Yes
128SUMO2SUMO2
Entrez,  Source
SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)10544-0.092-0.3201Yes
129RAGERAGE
Entrez,  Source
renal tumor antigen10582-0.093-0.3181Yes
130SAFBSAFB
Entrez,  Source
scaffold attachment factor B10617-0.094-0.3158Yes
131AP1G1AP1G1
Entrez,  Source
adaptor-related protein complex 1, gamma 1 subunit10662-0.096-0.3142Yes
132POU2F1POU2F1
Entrez,  Source
POU domain, class 2, transcription factor 110684-0.097-0.3108Yes
133EP300EP300
Entrez,  Source
E1A binding protein p30010720-0.098-0.3084Yes
134MYST2MYST2
Entrez,  Source
MYST histone acetyltransferase 210762-0.099-0.3063Yes
135RBM16RBM16
Entrez,  Source
RNA binding motif protein 1610775-0.100-0.3020Yes
136EIF4G2EIF4G2
Entrez,  Source
eukaryotic translation initiation factor 4 gamma, 210777-0.100-0.2969Yes
137WHSC2WHSC2
Entrez,  Source
Wolf-Hirschhorn syndrome candidate 210841-0.103-0.2964Yes
138RBM10RBM10
Entrez,  Source
RNA binding motif protein 1010844-0.103-0.2912Yes
139BTF3BTF3
Entrez,  Source
basic transcription factor 310857-0.103-0.2868Yes
140MAP4K3MAP4K3
Entrez,  Source
mitogen-activated protein kinase kinase kinase kinase 310875-0.104-0.2827Yes
141DDX17DDX17
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 1711050-0.110-0.2902Yes
142EIF4A1EIF4A1
Entrez,  Source
eukaryotic translation initiation factor 4A, isoform 111080-0.111-0.2866Yes
143LRRC4LRRC4
Entrez,  Source
leucine rich repeat containing 411089-0.111-0.2814Yes
144CLK4CLK4
Entrez,  Source
CDC-like kinase 411152-0.114-0.2802Yes
145PCTK2PCTK2
Entrez,  Source
PCTAIRE protein kinase 211205-0.116-0.2781Yes
146CSNK1A1CSNK1A1
Entrez,  Source
casein kinase 1, alpha 111439-0.127-0.2893Yes
147PTDSRPTDSR
Entrez,  Source
phosphatidylserine receptor11443-0.127-0.2829Yes
148RPL35ARPL35A
Entrez,  Source
ribosomal protein L35a11499-0.129-0.2804Yes
149EIF5EIF5
Entrez,  Source
eukaryotic translation initiation factor 511521-0.130-0.2752Yes
150TBC1D14TBC1D14
Entrez,  Source
TBC1 domain family, member 1411537-0.131-0.2696Yes
151ING4ING4
Entrez,  Source
inhibitor of growth family, member 411681-0.137-0.2733Yes
152HNRPCHNRPC
Entrez,  Source
heterogeneous nuclear ribonucleoprotein C (C1/C2)11772-0.143-0.2728Yes
153PAFAH1B1PAFAH1B1
Entrez,  Source
platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa11805-0.145-0.2677Yes
154BOP1BOP1
Entrez,  Source
block of proliferation 111822-0.146-0.2613Yes
155SFRS2SFRS2
Entrez,  Source
splicing factor, arginine/serine-rich 212039-0.160-0.2695Yes
156GFERGFER
Entrez,  Source
growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae)12069-0.162-0.2633Yes
157METTL3METTL3
Entrez,  Source
methyltransferase like 312152-0.168-0.2608Yes
158FTSJ3FTSJ3
Entrez,  Source
FtsJ homolog 3 (E. coli)12235-0.174-0.2579Yes
159AKAP8AKAP8
Entrez,  Source
A kinase (PRKA) anchor protein 812267-0.177-0.2511Yes
160ADNPADNP
Entrez,  Source
activity-dependent neuroprotector12323-0.181-0.2459Yes
161RBM12RBM12
Entrez,  Source
RNA binding motif protein 1212333-0.182-0.2371Yes
162SFRS10SFRS10
Entrez,  Source
splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila)12334-0.182-0.2277Yes
163RNF12RNF12
Entrez,  Source
ring finger protein 1212424-0.191-0.2245Yes
164RALARALA
Entrez,  Source
v-ral simian leukemia viral oncogene homolog A (ras related)12488-0.197-0.2191Yes
165AKAP8LAKAP8L
Entrez,  Source
A kinase (PRKA) anchor protein 8-like12492-0.198-0.2091Yes
166CRKLCRKL
Entrez,  Source
v-crk sarcoma virus CT10 oncogene homolog (avian)-like12518-0.201-0.2005Yes
167PRPSAP2PRPSAP2
Entrez,  Source
phosphoribosyl pyrophosphate synthetase-associated protein 212563-0.206-0.1932Yes
168CASC3CASC3
Entrez,  Source
cancer susceptibility candidate 312604-0.211-0.1852Yes
169ATP5G2ATP5G2
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)12683-0.222-0.1797Yes
170TARDBPTARDBP
Entrez,  Source
TAR DNA binding protein12761-0.235-0.1733Yes
171EXOC7EXOC7
Entrez,  Source
exocyst complex component 712763-0.235-0.1612Yes
172RBM3RBM3
Entrez,  Source
RNA binding motif (RNP1, RRM) protein 312895-0.266-0.1574Yes
173SFPQSFPQ
Entrez,  Source
splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated)12901-0.267-0.1439Yes
174HN1HN1
Entrez,  Source
hematological and neurological expressed 112908-0.269-0.1304Yes
175ILF3ILF3
Entrez,  Source
interleukin enhancer binding factor 3, 90kDa12940-0.274-0.1186Yes
176PTMAPTMA
Entrez,  Source
prothymosin, alpha (gene sequence 28)12945-0.275-0.1046Yes
177NASPNASP
Entrez,  Source
nuclear autoantigenic sperm protein (histone-binding)12994-0.291-0.0931Yes
178FUSFUS
Entrez,  Source
fusion (involved in t(12;16) in malignant liposarcoma)13034-0.303-0.0803Yes
179HNRPA1HNRPA1
Entrez,  Source
heterogeneous nuclear ribonucleoprotein A113080-0.318-0.0673Yes
180PSPC1PSPC1
Entrez,  Source
paraspeckle component 113102-0.328-0.0518Yes
181KIF1BKIF1B
Entrez,  Source
kinesin family member 1B13164-0.372-0.0371Yes
182H1F0H1F0
Entrez,  Source
H1 histone family, member 013165-0.372-0.0178Yes
183MAT2AMAT2A
Entrez,  Source
methionine adenosyltransferase II, alpha13299-0.6010.0033Yes
Table: GSEA details [plain text format]



Fig 2: GCCATNTTG_V$YY1_Q6   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GCCATNTTG_V$YY1_Q6: Random ES distribution   
Gene set null distribution of ES for GCCATNTTG_V$YY1_Q6