Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_24h.class.cls
#double_gel_8d_versus_double_gel_24h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in classdouble_gel_8d
GeneSetGLYCOLYSIS
Enrichment Score (ES)0.6019087
Normalized Enrichment Score (NES)1.8488876
Nominal p-value0.0018867925
FDR q-value0.019129384
FWER p-Value0.777
Table: GSEA Results Summary



Fig 1: Enrichment plot: GLYCOLYSIS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LDHBLDHB
Entrez,  Source
lactate dehydrogenase B151.1020.1452Yes
2ADHFE1ADHFE1
Entrez,  Source
alcohol dehydrogenase, iron containing, 1770.6970.2333Yes
3ALDH1A1ALDH1A1
Entrez,  Source
aldehyde dehydrogenase 1 family, member A11850.5100.2930Yes
4FBP1FBP1
Entrez,  Source
fructose-1,6-bisphosphatase 12030.4840.3561Yes
5ADH7ADH7
Entrez,  Source
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide3290.3740.3963Yes
6G6PCG6PC
Entrez,  Source
glucose-6-phosphatase, catalytic subunit3470.3660.4437Yes
7HK1HK1
Entrez,  Source
hexokinase 13850.3450.4868Yes
8PFKPPFKP
Entrez,  Source
phosphofructokinase, platelet4010.3370.5305Yes
9DLATDLAT
Entrez,  Source
dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)4110.3310.5737Yes
10ALDH3A2ALDH3A2
Entrez,  Source
aldehyde dehydrogenase 3 family, member A25260.2770.6019Yes
11PDHA2PDHA2
Entrez,  Source
pyruvate dehydrogenase (lipoamide) alpha 210260.1790.5882No
12ALDH3A1ALDH3A1
Entrez,  Source
aldehyde dehydrogenase 3 family, memberA114280.1400.5767No
13ENO2ENO2
Entrez,  Source
enolase 2 (gamma, neuronal)18890.1120.5570No
14ALDOBALDOB
Entrez,  Source
aldolase B, fructose-bisphosphate21520.1010.5508No
15PDHA1PDHA1
Entrez,  Source
pyruvate dehydrogenase (lipoamide) alpha 122490.0970.5565No
16ALDH2ALDH2
Entrez,  Source
aldehyde dehydrogenase 2 family (mitochondrial)25440.0860.5458No
17ALDH9A1ALDH9A1
Entrez,  Source
aldehyde dehydrogenase 9 family, member A128930.0740.5295No
18BPGMBPGM
Entrez,  Source
2,3-bisphosphoglycerate mutase33580.0610.5028No
19ALDOCALDOC
Entrez,  Source
aldolase C, fructose-bisphosphate34770.0580.5017No
20ALDH1A2ALDH1A2
Entrez,  Source
aldehyde dehydrogenase 1 family, member A237100.0520.4911No
21PDHBPDHB
Entrez,  Source
pyruvate dehydrogenase (lipoamide) beta37550.0510.4946No
22PFKMPFKM
Entrez,  Source
phosphofructokinase, muscle41790.0400.4681No
23ALDH1B1ALDH1B1
Entrez,  Source
aldehyde dehydrogenase 1 family, member B143750.0360.4583No
24ADH1AADH1A
Entrez,  Source
alcohol dehydrogenase 1A (class I), alpha polypeptide44480.0350.4575No
25ADH6ADH6
Entrez,  Source
alcohol dehydrogenase 6 (class V)46240.0320.4485No
26ALDOAALDOA
Entrez,  Source
aldolase A, fructose-bisphosphate50390.0230.4205No
27DLDDLD
Entrez,  Source
dihydrolipoamide dehydrogenase60880.0030.3422No
28HK2HK2
Entrez,  Source
hexokinase 26340-0.0010.3234No
29GAPDHGAPDH
Entrez,  Source
glyceraldehyde-3-phosphate dehydrogenase6466-0.0030.3144No
30ADH4ADH4
Entrez,  Source
alcohol dehydrogenase 4 (class II), pi polypeptide6589-0.0050.3059No
31FBP2FBP2
Entrez,  Source
fructose-1,6-bisphosphatase 27034-0.0130.2742No
32PGM1PGM1
Entrez,  Source
phosphoglucomutase 18051-0.0320.2021No
33AKR1A1AKR1A1
Entrez,  Source
aldo-keto reductase family 1, member A1 (aldehyde reductase)8947-0.0510.1416No
34LDHALDHA
Entrez,  Source
lactate dehydrogenase A9934-0.0750.0774No
35LDHCLDHC
Entrez,  Source
lactate dehydrogenase C10001-0.0770.0826No
36PGAM1PGAM1
Entrez,  Source
phosphoglycerate mutase 1 (brain)10093-0.0790.0862No
37ALDH3B1ALDH3B1
Entrez,  Source
aldehyde dehydrogenase 3 family, member B111040-0.1090.0297No
38ENO3ENO3
Entrez,  Source
enolase 3 (beta, muscle)11125-0.1130.0384No
39TPI1TPI1
Entrez,  Source
triosephosphate isomerase 111369-0.1230.0365No
40GPIGPI
Entrez,  Source
glucose phosphate isomerase12067-0.1620.0056No
41PGK1PGK1
Entrez,  Source
phosphoglycerate kinase 112194-0.1710.0188No
42PKLRPKLR
Entrez,  Source
pyruvate kinase, liver and RBC12501-0.2000.0223No
43GCKGCK
Entrez,  Source
glucokinase (hexokinase 4, maturity onset diabetes of the young 2)13052-0.3070.0218No
Table: GSEA details [plain text format]



Fig 2: GLYCOLYSIS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GLYCOLYSIS: Random ES distribution   
Gene set null distribution of ES for GLYCOLYSIS