Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | HDACI_COLON_CLUSTER10 |
| Enrichment Score (ES) | -0.5673519 |
| Normalized Enrichment Score (NES) | -1.6040616 |
| Nominal p-value | 0.025229357 |
| FDR q-value | 0.16634113 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FGFR4 | FGFR4 Entrez, Source | fibroblast growth factor receptor 4 | 1924 | 0.111 | -0.1022 | No |
| 2 | GAS6 | GAS6 Entrez, Source | growth arrest-specific 6 | 3043 | 0.070 | -0.1595 | No |
| 3 | GIT1 | GIT1 Entrez, Source | G protein-coupled receptor kinase interactor 1 | 3423 | 0.060 | -0.1651 | No |
| 4 | DEGS1 | DEGS1 Entrez, Source | degenerative spermatocyte homolog 1, lipid desaturase (Drosophila) | 3581 | 0.055 | -0.1558 | No |
| 5 | TSEN2 | TSEN2 Entrez, Source | tRNA splicing endonuclease 2 homolog (S. cerevisiae) | 3845 | 0.049 | -0.1569 | No |
| 6 | ST3GAL4 | ST3GAL4 Entrez, Source | ST3 beta-galactoside alpha-2,3-sialyltransferase 4 | 4788 | 0.028 | -0.2169 | No |
| 7 | UQCRFS1 | UQCRFS1 Entrez, Source | ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 | 6010 | 0.005 | -0.3066 | No |
| 8 | PAF1 | PAF1 Entrez, Source | Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) | 8778 | -0.047 | -0.4963 | No |
| 9 | IGF2BP1 | IGF2BP1 Entrez, Source | insulin-like growth factor 2 mRNA binding protein 1 | 9687 | -0.068 | -0.5387 | Yes |
| 10 | LASS2 | LASS2 Entrez, Source | LAG1 homolog, ceramide synthase 2 (S. cerevisiae) | 10070 | -0.079 | -0.5374 | Yes |
| 11 | USF2 | USF2 Entrez, Source | upstream transcription factor 2, c-fos interacting | 10299 | -0.084 | -0.5223 | Yes |
| 12 | GLMN | GLMN Entrez, Source | glomulin, FKBP associated protein | 10385 | -0.087 | -0.4956 | Yes |
| 13 | SCCPDH | SCCPDH Entrez, Source | saccharopine dehydrogenase (putative) | 10543 | -0.092 | -0.4725 | Yes |
| 14 | INPP5D | INPP5D Entrez, Source | inositol polyphosphate-5-phosphatase, 145kDa | 11035 | -0.109 | -0.4677 | Yes |
| 15 | YY1 | YY1 Entrez, Source | YY1 transcription factor | 11101 | -0.112 | -0.4298 | Yes |
| 16 | MET | MET Entrez, Source | met proto-oncogene (hepatocyte growth factor receptor) | 11573 | -0.132 | -0.4147 | Yes |
| 17 | ANKRD15 | ANKRD15 Entrez, Source | ankyrin repeat domain 15 | 11802 | -0.145 | -0.3767 | Yes |
| 18 | ADNP | ADNP Entrez, Source | activity-dependent neuroprotector | 12323 | -0.181 | -0.3465 | Yes |
| 19 | MTR | MTR Entrez, Source | 5-methyltetrahydrofolate-homocysteine methyltransferase | 12741 | -0.232 | -0.2895 | Yes |
| 20 | RNF138 | RNF138 Entrez, Source | ring finger protein 138 | 13055 | -0.309 | -0.1954 | Yes |
| 21 | OTUD4 | OTUD4 Entrez, Source | OTU domain containing 4 | 13292 | -0.569 | 0.0038 | Yes |
