Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | IDX_TSA_UP_CLUSTER3 |
| Enrichment Score (ES) | -0.45542312 |
| Normalized Enrichment Score (NES) | -1.4749508 |
| Nominal p-value | 0.04025424 |
| FDR q-value | 0.24501774 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | WNT4 | WNT4 Entrez, Source | wingless-type MMTV integration site family, member 4 | 42 | 0.852 | 0.1273 | No |
| 2 | CX3CL1 | CX3CL1 Entrez, Source | chemokine (C-X3-C motif) ligand 1 | 796 | 0.215 | 0.1036 | No |
| 3 | LMO4 | LMO4 Entrez, Source | LIM domain only 4 | 824 | 0.209 | 0.1335 | No |
| 4 | KIF2C | KIF2C Entrez, Source | kinesin family member 2C | 1116 | 0.169 | 0.1375 | No |
| 5 | ABCA1 | ABCA1 Entrez, Source | ATP-binding cassette, sub-family A (ABC1), member 1 | 1319 | 0.149 | 0.1452 | No |
| 6 | KIAA0101 | KIAA0101 Entrez, Source | KIAA0101 | 2376 | 0.093 | 0.0800 | No |
| 7 | E2F8 | E2F8 Entrez, Source | E2F transcription factor 8 | 2573 | 0.084 | 0.0782 | No |
| 8 | CCNF | CCNF Entrez, Source | cyclin F | 2662 | 0.081 | 0.0840 | No |
| 9 | GAS6 | GAS6 Entrez, Source | growth arrest-specific 6 | 3043 | 0.070 | 0.0662 | No |
| 10 | TACC3 | TACC3 Entrez, Source | transforming, acidic coiled-coil containing protein 3 | 3823 | 0.050 | 0.0152 | No |
| 11 | KLF5 | KLF5 Entrez, Source | Kruppel-like factor 5 (intestinal) | 4503 | 0.034 | -0.0307 | No |
| 12 | SLCO3A1 | SLCO3A1 Entrez, Source | solute carrier organic anion transporter family, member 3A1 | 5268 | 0.019 | -0.0852 | No |
| 13 | BIRC5 | BIRC5 Entrez, Source | baculoviral IAP repeat-containing 5 (survivin) | 5848 | 0.008 | -0.1275 | No |
| 14 | FIGNL1 | FIGNL1 Entrez, Source | fidgetin-like 1 | 5887 | 0.007 | -0.1292 | No |
| 15 | KIF4A | KIF4A Entrez, Source | kinesin family member 4A | 6459 | -0.003 | -0.1717 | No |
| 16 | AQP1 | AQP1 Entrez, Source | aquaporin 1 (Colton blood group) | 7239 | -0.017 | -0.2277 | No |
| 17 | PLK1 | PLK1 Entrez, Source | polo-like kinase 1 (Drosophila) | 7458 | -0.021 | -0.2409 | No |
| 18 | PTGFR | PTGFR Entrez, Source | prostaglandin F receptor (FP) | 8181 | -0.035 | -0.2899 | No |
| 19 | CCNB2 | CCNB2 Entrez, Source | cyclin B2 | 8537 | -0.042 | -0.3101 | No |
| 20 | HGF | HGF Entrez, Source | hepatocyte growth factor (hepapoietin A; scatter factor) | 8951 | -0.051 | -0.3334 | No |
| 21 | CDCA7 | CDCA7 Entrez, Source | cell division cycle associated 7 | 9009 | -0.052 | -0.3297 | No |
| 22 | NQO1 | NQO1 Entrez, Source | NAD(P)H dehydrogenase, quinone 1 | 9332 | -0.059 | -0.3449 | No |
| 23 | TCF19 | TCF19 Entrez, Source | transcription factor 19 (SC1) | 9433 | -0.061 | -0.3430 | No |
| 24 | CCNB1 | CCNB1 Entrez, Source | cyclin B1 | 9610 | -0.066 | -0.3462 | No |
| 25 | TYMS | TYMS Entrez, Source | thymidylate synthetase | 9675 | -0.067 | -0.3407 | No |
| 26 | CDCA8 | CDCA8 Entrez, Source | cell division cycle associated 8 | 10619 | -0.094 | -0.3971 | No |
| 27 | BRCA1 | BRCA1 Entrez, Source | breast cancer 1, early onset | 11096 | -0.112 | -0.4158 | No |
| 28 | CDC20 | CDC20 Entrez, Source | CDC20 cell division cycle 20 homolog (S. cerevisiae) | 11434 | -0.126 | -0.4218 | No |
| 29 | BZW1 | BZW1 Entrez, Source | basic leucine zipper and W2 domains 1 | 11682 | -0.137 | -0.4193 | No |
| 30 | TRIP13 | TRIP13 Entrez, Source | thyroid hormone receptor interactor 13 | 12163 | -0.169 | -0.4296 | Yes |
| 31 | AURKA | AURKA Entrez, Source | aurora kinase A | 12238 | -0.175 | -0.4084 | Yes |
| 32 | IL13RA1 | IL13RA1 Entrez, Source | interleukin 13 receptor, alpha 1 | 12296 | -0.179 | -0.3852 | Yes |
| 33 | IMPDH2 | IMPDH2 Entrez, Source | IMP (inosine monophosphate) dehydrogenase 2 | 12613 | -0.213 | -0.3764 | Yes |
| 34 | USP1 | USP1 Entrez, Source | ubiquitin specific peptidase 1 | 12629 | -0.215 | -0.3446 | Yes |
| 35 | PRIM1 | PRIM1 Entrez, Source | primase, polypeptide 1, 49kDa | 12830 | -0.249 | -0.3215 | Yes |
| 36 | TUBB6 | TUBB6 Entrez, Source | tubulin, beta 6 | 12883 | -0.262 | -0.2852 | Yes |
| 37 | KIF22 | KIF22 Entrez, Source | kinesin family member 22 | 12933 | -0.273 | -0.2471 | Yes |
| 38 | FEN1 | FEN1 Entrez, Source | flap structure-specific endonuclease 1 | 12971 | -0.283 | -0.2066 | Yes |
| 39 | NASP | NASP Entrez, Source | nuclear autoantigenic sperm protein (histone-binding) | 12994 | -0.291 | -0.1636 | Yes |
| 40 | MCM7 | MCM7 Entrez, Source | MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) | 13101 | -0.328 | -0.1214 | Yes |
| 41 | DCK | DCK Entrez, Source | deoxycytidine kinase | 13222 | -0.428 | -0.0649 | Yes |
| 42 | CSRP2 | CSRP2 Entrez, Source | cysteine and glycine-rich protein 2 | 13250 | -0.482 | 0.0069 | Yes |
