Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | IFN_ALPHA_UP |
| Enrichment Score (ES) | -0.6542601 |
| Normalized Enrichment Score (NES) | -1.8659018 |
| Nominal p-value | 0.004494382 |
| FDR q-value | 0.025754208 |
| FWER p-Value | 0.594 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | VEGFC | VEGFC Entrez, Source | vascular endothelial growth factor C | 1410 | 0.142 | -0.0674 | No |
| 2 | XRCC6 | XRCC6 Entrez, Source | X-ray repair complementing defective repair in Chinese hamster cells 6 (Ku autoantigen, 70kDa) | 3080 | 0.069 | -0.1740 | No |
| 3 | BTG1 | BTG1 Entrez, Source | B-cell translocation gene 1, anti-proliferative | 3329 | 0.062 | -0.1759 | No |
| 4 | SKP1A | SKP1A Entrez, Source | S-phase kinase-associated protein 1A (p19A) | 4751 | 0.029 | -0.2747 | No |
| 5 | IL6 | IL6 Entrez, Source | interleukin 6 (interferon, beta 2) | 5285 | 0.019 | -0.3096 | No |
| 6 | COL16A1 | COL16A1 Entrez, Source | collagen, type XVI, alpha 1 | 5388 | 0.017 | -0.3127 | No |
| 7 | CASP8 | CASP8 Entrez, Source | caspase 8, apoptosis-related cysteine peptidase | 6929 | -0.011 | -0.4253 | No |
| 8 | MX1 | MX1 Entrez, Source | myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) | 6942 | -0.011 | -0.4232 | No |
| 9 | PPP3CA | PPP3CA Entrez, Source | protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha) | 7229 | -0.017 | -0.4402 | No |
| 10 | IRF1 | IRF1 Entrez, Source | interferon regulatory factor 1 | 7528 | -0.022 | -0.4565 | No |
| 11 | GMPR | GMPR Entrez, Source | guanosine monophosphate reductase | 8380 | -0.039 | -0.5099 | No |
| 12 | SDCBP | SDCBP Entrez, Source | syndecan binding protein (syntenin) | 8389 | -0.039 | -0.4999 | No |
| 13 | BBC3 | BBC3 Entrez, Source | BCL2 binding component 3 | 9354 | -0.059 | -0.5562 | No |
| 14 | EPS15 | EPS15 Entrez, Source | epidermal growth factor receptor pathway substrate 15 | 10074 | -0.079 | -0.5888 | No |
| 15 | NMI | NMI Entrez, Source | N-myc (and STAT) interactor | 10574 | -0.093 | -0.6012 | No |
| 16 | DDX17 | DDX17 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 | 11050 | -0.110 | -0.6071 | No |
| 17 | STAT1 | STAT1 Entrez, Source | signal transducer and activator of transcription 1, 91kDa | 11180 | -0.115 | -0.5855 | No |
| 18 | MAP3K10 | MAP3K10 Entrez, Source | mitogen-activated protein kinase kinase kinase 10 | 12097 | -0.164 | -0.6098 | Yes |
| 19 | ADAR | ADAR Entrez, Source | adenosine deaminase, RNA-specific | 12573 | -0.208 | -0.5892 | Yes |
| 20 | FAS | FAS Entrez, Source | Fas (TNF receptor superfamily, member 6) | 12738 | -0.231 | -0.5390 | Yes |
| 21 | BST2 | BST2 Entrez, Source | bone marrow stromal cell antigen 2 | 13047 | -0.306 | -0.4791 | Yes |
| 22 | OAS1 | OAS1 Entrez, Source | 2',5'-oligoadenylate synthetase 1, 40/46kDa | 13115 | -0.335 | -0.3933 | Yes |
| 23 | IFIT3 | IFIT3 Entrez, Source | interferon-induced protein with tetratricopeptide repeats 3 | 13294 | -0.577 | -0.2503 | Yes |
| 24 | MX2 | MX2 Entrez, Source | myxovirus (influenza virus) resistance 2 (mouse) | 13331 | -0.937 | 0.0008 | Yes |
