Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | IFN_GAMMA_UP |
| Enrichment Score (ES) | -0.5579244 |
| Normalized Enrichment Score (NES) | -1.6027623 |
| Nominal p-value | 0.012371134 |
| FDR q-value | 0.16566865 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | VEGFC | VEGFC Entrez, Source | vascular endothelial growth factor C | 1410 | 0.142 | -0.0629 | No |
| 2 | BAK1 | BAK1 Entrez, Source | BCL2-antagonist/killer 1 | 1477 | 0.137 | -0.0265 | No |
| 3 | PARP1 | PARP1 Entrez, Source | poly (ADP-ribose) polymerase family, member 1 | 2474 | 0.089 | -0.0744 | No |
| 4 | CEBPD | CEBPD Entrez, Source | CCAAT/enhancer binding protein (C/EBP), delta | 2628 | 0.083 | -0.0608 | No |
| 5 | XRCC6 | XRCC6 Entrez, Source | X-ray repair complementing defective repair in Chinese hamster cells 6 (Ku autoantigen, 70kDa) | 3080 | 0.069 | -0.0738 | No |
| 6 | HADH | HADH Entrez, Source | hydroxyacyl-Coenzyme A dehydrogenase | 3083 | 0.069 | -0.0532 | No |
| 7 | BTG1 | BTG1 Entrez, Source | B-cell translocation gene 1, anti-proliferative | 3329 | 0.062 | -0.0528 | No |
| 8 | PPP5C | PPP5C Entrez, Source | protein phosphatase 5, catalytic subunit | 4288 | 0.038 | -0.1133 | No |
| 9 | IL6 | IL6 Entrez, Source | interleukin 6 (interferon, beta 2) | 5285 | 0.019 | -0.1824 | No |
| 10 | COL16A1 | COL16A1 Entrez, Source | collagen, type XVI, alpha 1 | 5388 | 0.017 | -0.1849 | No |
| 11 | EIF2B1 | EIF2B1 Entrez, Source | eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa | 5418 | 0.016 | -0.1821 | No |
| 12 | ICAM1 | ICAM1 Entrez, Source | intercellular adhesion molecule 1 (CD54), human rhinovirus receptor | 6591 | -0.005 | -0.2685 | No |
| 13 | CASP8 | CASP8 Entrez, Source | caspase 8, apoptosis-related cysteine peptidase | 6929 | -0.011 | -0.2905 | No |
| 14 | IRF1 | IRF1 Entrez, Source | interferon regulatory factor 1 | 7528 | -0.022 | -0.3287 | No |
| 15 | HADHB | HADHB Entrez, Source | hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit | 7978 | -0.031 | -0.3531 | No |
| 16 | BBC3 | BBC3 Entrez, Source | BCL2 binding component 3 | 9354 | -0.059 | -0.4384 | No |
| 17 | PSME1 | PSME1 Entrez, Source | proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) | 10002 | -0.077 | -0.4638 | No |
| 18 | NMI | NMI Entrez, Source | N-myc (and STAT) interactor | 10574 | -0.093 | -0.4786 | No |
| 19 | STAT1 | STAT1 Entrez, Source | signal transducer and activator of transcription 1, 91kDa | 11180 | -0.115 | -0.4891 | No |
| 20 | MAP3K10 | MAP3K10 Entrez, Source | mitogen-activated protein kinase kinase kinase 10 | 12097 | -0.164 | -0.5083 | Yes |
| 21 | ADAR | ADAR Entrez, Source | adenosine deaminase, RNA-specific | 12573 | -0.208 | -0.4811 | Yes |
| 22 | FAS | FAS Entrez, Source | Fas (TNF receptor superfamily, member 6) | 12738 | -0.231 | -0.4237 | Yes |
| 23 | VAT1 | VAT1 Entrez, Source | vesicle amine transport protein 1 homolog (T californica) | 12879 | -0.262 | -0.3550 | Yes |
| 24 | FOSL1 | FOSL1 Entrez, Source | FOS-like antigen 1 | 12920 | -0.270 | -0.2762 | Yes |
| 25 | PHLDA1 | PHLDA1 Entrez, Source | pleckstrin homology-like domain, family A, member 1 | 13228 | -0.440 | -0.1662 | Yes |
| 26 | IFIT3 | IFIT3 Entrez, Source | interferon-induced protein with tetratricopeptide repeats 3 | 13294 | -0.577 | 0.0036 | Yes |
