Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_24h.class.cls
#double_gel_8d_versus_double_gel_24h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in classdouble_gel_8d
GeneSetIGLESIAS_E2FMINUS_UP
Enrichment Score (ES)0.64701426
Normalized Enrichment Score (NES)2.3330874
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: IGLESIAS_E2FMINUS_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1COL1A2COL1A2
Entrez,  Source
collagen, type I, alpha 2121.2540.0541Yes
2SLC25A4SLC25A4
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4131.1950.1065Yes
3CCND2CCND2
Entrez,  Source
cyclin D2211.0390.1515Yes
4ANXA1ANXA1
Entrez,  Source
annexin A1250.9950.1949Yes
5DAB2DAB2
Entrez,  Source
disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)320.9250.2351Yes
6CD9CD9
Entrez,  Source
CD9 molecule410.8710.2727Yes
7COL3A1COL3A1
Entrez,  Source
collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)430.8430.3096Yes
8S100A6S100A6
Entrez,  Source
S100 calcium binding protein A6550.7850.3432Yes
9COL5A2COL5A2
Entrez,  Source
collagen, type V, alpha 2610.7590.3761Yes
10LGALS1LGALS1
Entrez,  Source
lectin, galactoside-binding, soluble, 1 (galectin 1)820.6870.4047Yes
11COL4A1COL4A1
Entrez,  Source
collagen, type IV, alpha 1890.6800.4341Yes
12LPLLPL
Entrez,  Source
lipoprotein lipase1070.6460.4612Yes
13EMP1EMP1
Entrez,  Source
epithelial membrane protein 11190.6210.4876Yes
14SERPINH1SERPINH1
Entrez,  Source
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)2330.4570.4991Yes
15CTSECTSE
Entrez,  Source
cathepsin E2840.4110.5133Yes
16CFDCFD
Entrez,  Source
complement factor D (adipsin)2860.4100.5313Yes
17GJA1GJA1
Entrez,  Source
gap junction protein, alpha 1, 43kDa (connexin 43)3160.3870.5460Yes
18TMSB4XTMSB4X
Entrez,  Source
thymosin, beta 4, X-linked3420.3690.5603Yes
19SERPINB6A4610.3010.5646Yes
20SPARCSPARC
Entrez,  Source
secreted protein, acidic, cysteine-rich (osteonectin)4800.2920.5761Yes
21ANXA3ANXA3
Entrez,  Source
annexin A34840.2910.5886Yes
22COL1A1COL1A1
Entrez,  Source
collagen, type I, alpha 15250.2770.5978Yes
23S100A11S100A11
Entrez,  Source
S100 calcium binding protein A115620.2670.6067Yes
24NFKBIANFKBIA
Entrez,  Source
nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha5650.2650.6182Yes
25COL6A2COL6A2
Entrez,  Source
collagen, type VI, alpha 25790.2620.6287Yes
26GSNGSN
Entrez,  Source
gelsolin (amyloidosis, Finnish type)6660.2420.6328Yes
27CDO1CDO1
Entrez,  Source
cysteine dioxygenase, type I6890.2370.6416Yes
28C1QBC1QB
Entrez,  Source
complement component 1, q subcomponent, B chain7860.2170.6438Yes
29IGSF4IGSF4
Entrez,  Source
immunoglobulin superfamily, member 49320.1900.6412Yes
30TYROBPTYROBP
Entrez,  Source
TYRO protein tyrosine kinase binding protein9650.1870.6470Yes
31COL18A1COL18A1
Entrez,  Source
collagen, type XVIII, alpha 111030.1700.6441No
32CTSSCTSS
Entrez,  Source
cathepsin S12640.1540.6388No
33GNAI2GNAI2
Entrez,  Source
guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 215850.1290.6203No
34ARSAARSA
Entrez,  Source
arylsulfatase A17020.1230.6169No
35ACADLACADL
Entrez,  Source
acyl-Coenzyme A dehydrogenase, long chain17200.1220.6210No
36SS18SS18
Entrez,  Source
synovial sarcoma translocation, chromosome 1817530.1190.6238No
37RHOBRHOB
Entrez,  Source
ras homolog gene family, member B20720.1050.6044No
38SERPINF1SERPINF1
Entrez,  Source
serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 123610.0930.5867No
39RBP1RBP1
Entrez,  Source
retinol binding protein 1, cellular25910.0840.5731No
40APOEAPOE
Entrez,  Source
apolipoprotein E26190.0830.5746No
41APLP2APLP2
Entrez,  Source
amyloid beta (A4) precursor-like protein 226570.0820.5754No
42CD53CD53
Entrez,  Source
CD53 molecule29320.0730.5579No
43C3C3
Entrez,  Source
complement component 329450.0730.5602No
44ENPP2ENPP2
Entrez,  Source
ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin)29520.0720.5629No
45GAS6GAS6
Entrez,  Source
growth arrest-specific 630430.0700.5592No
46ALAS2ALAS2
Entrez,  Source
aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia)31030.0680.5578No
47NPTNNPTN
Entrez,  Source
neuroplastin31330.0680.5585No
48ACADMACADM
Entrez,  Source
acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain37940.0500.5109No
49SEPT2SEPT2
Entrez,  Source
septin 239950.0450.4977No
50NID2NID2
Entrez,  Source
nidogen 2 (osteonidogen)40250.0440.4975No
51FBLN2FBLN2
Entrez,  Source
fibulin 241170.0420.4924No
52DSTNDSTN
Entrez,  Source
destrin (actin depolymerizing factor)41980.0400.4881No
53CSRP1CSRP1
Entrez,  Source
cysteine and glycine-rich protein 145220.0330.4652No
54IGFBP4IGFBP4
Entrez,  Source
insulin-like growth factor binding protein 445780.0320.4624No
55S100A10S100A10
Entrez,  Source
S100 calcium binding protein A1046300.0310.4600No
56SKP1ASKP1A
Entrez,  Source
S-phase kinase-associated protein 1A (p19A)47510.0290.4522No
57NFIBNFIB
Entrez,  Source
nuclear factor I/B47970.0280.4500No
58ACTA2ACTA2
Entrez,  Source
actin, alpha 2, smooth muscle, aorta48270.0270.4490No
59ADIPOQADIPOQ
Entrez,  Source
adiponectin, C1Q and collagen domain containing48380.0270.4494No
60NID1NID1
Entrez,  Source
nidogen 148910.0260.4467No
61CCNG1CCNG1
Entrez,  Source
cyclin G152700.0190.4189No
62CLK1CLK1
Entrez,  Source
CDC-like kinase 155040.0150.4020No
63EVLEVL
Entrez,  Source
Enah/Vasp-like57890.0090.3809No
64LAPTM5LAPTM5
Entrez,  Source
lysosomal associated multispanning membrane protein 558270.0090.3785No
65CAPZA2CAPZA2
Entrez,  Source
capping protein (actin filament) muscle Z-line, alpha 259820.0050.3671No
66SCG2SCG2
Entrez,  Source
secretogranin II (chromogranin C)6379-0.0010.3372No
67IGFBP5IGFBP5
Entrez,  Source
insulin-like growth factor binding protein 56450-0.0030.3321No
68ANGPTL2ANGPTL2
Entrez,  Source
angiopoietin-like 26574-0.0050.3230No
69CALM2CALM2
Entrez,  Source
calmodulin 2 (phosphorylase kinase, delta)6851-0.0100.3026No
70PMP22PMP22
Entrez,  Source
peripheral myelin protein 226967-0.0120.2944No
71COL15A1COL15A1
Entrez,  Source
collagen, type XV, alpha 16979-0.0120.2941No
72B2MB2M
Entrez,  Source
beta-2-microglobulin7066-0.0140.2882No
73DCNDCN
Entrez,  Source
decorin7217-0.0160.2776No
74LCP1LCP1
Entrez,  Source
lymphocyte cytosolic protein 1 (L-plastin)7308-0.0180.2716No
75ELNELN
Entrez,  Source
elastin (supravalvular aortic stenosis, Williams-Beuren syndrome)7315-0.0180.2719No
76TIMM22TIMM22
Entrez,  Source
translocase of inner mitochondrial membrane 22 homolog (yeast)7491-0.0210.2596No
77SMAD1SMAD1
Entrez,  Source
SMAD, mothers against DPP homolog 1 (Drosophila)7536-0.0220.2573No
78LYL1LYL1
Entrez,  Source
lymphoblastic leukemia derived sequence 17941-0.0300.2281No
79ANXA2ANXA2
Entrez,  Source
annexin A28088-0.0330.2185No
80ITGB1ITGB1
Entrez,  Source
integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)8134-0.0340.2166No
81HBA-A18605-0.0440.1830No
82CD47CD47
Entrez,  Source
CD47 molecule8623-0.0440.1836No
83ITM2BITM2B
Entrez,  Source
integral membrane protein 2B8720-0.0460.1784No
84CDC42CDC42
Entrez,  Source
cell division cycle 42 (GTP binding protein, 25kDa)8893-0.0500.1676No
85LUMLUM
Entrez,  Source
lumican8919-0.0500.1679No
86KITLGKITLG
Entrez,  Source
KIT ligand9361-0.0600.1372No
87LAPTM4ALAPTM4A
Entrez,  Source
lysosomal-associated protein transmembrane 4 alpha9810-0.0710.1064No
88RPS14RPS14
Entrez,  Source
ribosomal protein S149858-0.0730.1061No
89CDKN1CCDKN1C
Entrez,  Source
cyclin-dependent kinase inhibitor 1C (p57, Kip2)10104-0.0790.0910No
90RBBP7RBBP7
Entrez,  Source
retinoblastoma binding protein 710181-0.0810.0889No
91DNAJA1DNAJA1
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily A, member 110249-0.0830.0874No
92BAXBAX
Entrez,  Source
BCL2-associated X protein10485-0.0900.0736No
93MORF4L1MORF4L1
Entrez,  Source
mortality factor 4 like 110928-0.1060.0449No
94CNN3CNN3
Entrez,  Source
calponin 3, acidic11041-0.1090.0412No
95ID2ID2
Entrez,  Source
inhibitor of DNA binding 2, dominant negative helix-loop-helix protein11229-0.1170.0322No
96CTSZCTSZ
Entrez,  Source
cathepsin Z11291-0.1200.0328No
97PCNAPCNA
Entrez,  Source
proliferating cell nuclear antigen11449-0.1270.0266No
98BZW1BZW1
Entrez,  Source
basic leucine zipper and W2 domains 111682-0.1370.0150No
99GNB1GNB1
Entrez,  Source
guanine nucleotide binding protein (G protein), beta polypeptide 111879-0.1490.0068No
100LMNALMNA
Entrez,  Source
lamin A/C12500-0.199-0.0313No
101CACYBPCACYBP
Entrez,  Source
calcyclin binding protein12649-0.217-0.0330No
102FMO1FMO1
Entrez,  Source
flavin containing monooxygenase 112848-0.253-0.0368No
103TUBBTUBB
Entrez,  Source
tubulin, beta12860-0.256-0.0265No
104GADD45BGADD45B
Entrez,  Source
growth arrest and DNA-damage-inducible, beta12969-0.282-0.0222No
105MCM7MCM7
Entrez,  Source
MCM7 minichromosome maintenance deficient 7 (S. cerevisiae)13101-0.328-0.0178No
106UGDHUGDH
Entrez,  Source
UDP-glucose dehydrogenase13138-0.352-0.0051No
107CES3CES3
Entrez,  Source
carboxylesterase 3 (brain)13245-0.4650.0073No
Table: GSEA details [plain text format]



Fig 2: IGLESIAS_E2FMINUS_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: IGLESIAS_E2FMINUS_UP: Random ES distribution   
Gene set null distribution of ES for IGLESIAS_E2FMINUS_UP