Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
Upregulated in class | double_gel_8d |
GeneSet | IRITANI_ADPROX_VASC |
Enrichment Score (ES) | 0.571636 |
Normalized Enrichment Score (NES) | 2.0380063 |
Nominal p-value | 0.0 |
FDR q-value | 0.003022846 |
FWER p-Value | 0.073 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | COL1A2 | COL1A2 Entrez,  Source | collagen, type I, alpha 2 | 12 | 1.254 | 0.0731 | Yes |
2 | LDHB | LDHB Entrez,  Source | lactate dehydrogenase B | 15 | 1.102 | 0.1380 | Yes |
3 | LAMC2 | LAMC2 Entrez,  Source | laminin, gamma 2 | 23 | 1.021 | 0.1977 | Yes |
4 | CLDN7 | CLDN7 Entrez,  Source | claudin 7 | 36 | 0.888 | 0.2492 | Yes |
5 | TAGLN | TAGLN Entrez,  Source | transgelin | 40 | 0.874 | 0.3005 | Yes |
6 | PROCR | PROCR Entrez,  Source | protein C receptor, endothelial (EPCR) | 59 | 0.763 | 0.3442 | Yes |
7 | BGN | BGN Entrez,  Source | biglycan | 241 | 0.450 | 0.3571 | Yes |
8 | RGS10 | RGS10 Entrez,  Source | regulator of G-protein signalling 10 | 247 | 0.443 | 0.3828 | Yes |
9 | PRNP | PRNP Entrez,  Source | prion protein (p27-30) (Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia) | 290 | 0.408 | 0.4037 | Yes |
10 | LAMA5 | LAMA5 Entrez,  Source | laminin, alpha 5 | 368 | 0.352 | 0.4187 | Yes |
11 | CCL2 | CCL2 Entrez,  Source | chemokine (C-C motif) ligand 2 | 405 | 0.336 | 0.4358 | Yes |
12 | CXCL1 | CXCL1 Entrez,  Source | chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) | 474 | 0.294 | 0.4480 | Yes |
13 | ANXA3 | ANXA3 Entrez,  Source | annexin A3 | 484 | 0.291 | 0.4645 | Yes |
14 | PKIA | PKIA Entrez,  Source | protein kinase (cAMP-dependent, catalytic) inhibitor alpha | 588 | 0.260 | 0.4721 | Yes |
15 | RGS4 | RGS4 Entrez,  Source | regulator of G-protein signalling 4 | 639 | 0.247 | 0.4829 | Yes |
16 | IGF2BP3 | IGF2BP3 Entrez,  Source | insulin-like growth factor 2 mRNA binding protein 3 | 746 | 0.228 | 0.4883 | Yes |
17 | AGRIN | AGRIN Entrez,  Source | agrin | 801 | 0.213 | 0.4968 | Yes |
18 | ECE1 | ECE1 Entrez,  Source | endothelin converting enzyme 1 | 814 | 0.211 | 0.5084 | Yes |
19 | CD59 | CD59 Entrez,  Source | CD59 molecule, complement regulatory protein | 818 | 0.210 | 0.5206 | Yes |
20 | FLT1 | FLT1 Entrez,  Source | fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) | 835 | 0.207 | 0.5316 | Yes |
21 | IER3 | IER3 Entrez,  Source | immediate early response 3 | 908 | 0.195 | 0.5376 | Yes |
22 | ATP1B1 | ATP1B1 Entrez,  Source | ATPase, Na+/K+ transporting, beta 1 polypeptide | 973 | 0.186 | 0.5438 | Yes |
23 | LPXN | LPXN Entrez,  Source | leupaxin | 979 | 0.185 | 0.5543 | Yes |
24 | BASP1 | BASP1 Entrez,  Source | brain abundant, membrane attached signal protein 1 | 1031 | 0.178 | 0.5610 | Yes |
25 | UPP1 | UPP1 Entrez,  Source | uridine phosphorylase 1 | 1070 | 0.174 | 0.5684 | Yes |
26 | EIF2B2 | EIF2B2 Entrez,  Source | eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa | 1156 | 0.164 | 0.5716 | Yes |
27 | VEGFC | VEGFC Entrez,  Source | vascular endothelial growth factor C | 1410 | 0.142 | 0.5609 | No |
28 | ANXA6 | ANXA6 Entrez,  Source | annexin A6 | 1714 | 0.122 | 0.5452 | No |
29 | TCN2 | TCN2 Entrez,  Source | transcobalamin II; macrocytic anemia | 1729 | 0.121 | 0.5513 | No |
30 | ENO2 | ENO2 Entrez,  Source | enolase 2 (gamma, neuronal) | 1889 | 0.112 | 0.5459 | No |
31 | NR2F2 | NR2F2 Entrez,  Source | nuclear receptor subfamily 2, group F, member 2 | 2048 | 0.106 | 0.5402 | No |
32 | RHOB | RHOB Entrez,  Source | ras homolog gene family, member B | 2072 | 0.105 | 0.5447 | No |
33 | ARHGDIB | ARHGDIB Entrez,  Source | Rho GDP dissociation inhibitor (GDI) beta | 2541 | 0.086 | 0.5144 | No |
34 | ALDH2 | ALDH2 Entrez,  Source | aldehyde dehydrogenase 2 family (mitochondrial) | 2544 | 0.086 | 0.5193 | No |
35 | SLC38A6 | SLC38A6 Entrez,  Source | solute carrier family 38, member 6 | 2749 | 0.079 | 0.5086 | No |
36 | ICAM2 | ICAM2 Entrez,  Source | intercellular adhesion molecule 2 | 2873 | 0.075 | 0.5037 | No |
37 | CAPG | CAPG Entrez,  Source | capping protein (actin filament), gelsolin-like | 2891 | 0.074 | 0.5068 | No |
38 | MAPKAPK3 | MAPKAPK3 Entrez,  Source | mitogen-activated protein kinase-activated protein kinase 3 | 3069 | 0.069 | 0.4975 | No |
39 | AXL | AXL Entrez,  Source | AXL receptor tyrosine kinase | 3086 | 0.069 | 0.5004 | No |
40 | MMP14 | MMP14 Entrez,  Source | matrix metallopeptidase 14 (membrane-inserted) | 3176 | 0.066 | 0.4976 | No |
41 | LTBP2 | LTBP2 Entrez,  Source | latent transforming growth factor beta binding protein 2 | 3324 | 0.062 | 0.4901 | No |
42 | BMP6 | BMP6 Entrez,  Source | bone morphogenetic protein 6 | 3348 | 0.061 | 0.4920 | No |
43 | EFEMP1 | EFEMP1 Entrez,  Source | EGF-containing fibulin-like extracellular matrix protein 1 | 3378 | 0.061 | 0.4934 | No |
44 | BTG2 | BTG2 Entrez,  Source | BTG family, member 2 | 3759 | 0.051 | 0.4677 | No |
45 | CXCR4 | CXCR4 Entrez,  Source | chemokine (C-X-C motif) receptor 4 | 3767 | 0.051 | 0.4702 | No |
46 | PLA2G4A | PLA2G4A Entrez,  Source | phospholipase A2, group IVA (cytosolic, calcium-dependent) | 3785 | 0.050 | 0.4719 | No |
47 | SMAD3 | SMAD3 Entrez,  Source | SMAD, mothers against DPP homolog 3 (Drosophila) | 3790 | 0.050 | 0.4745 | No |
48 | SLC1A1 | SLC1A1 Entrez,  Source | solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 | 3801 | 0.050 | 0.4767 | No |
49 | TGFBI | TGFBI Entrez,  Source | transforming growth factor, beta-induced, 68kDa | 4125 | 0.042 | 0.4548 | No |
50 | PFKM | PFKM Entrez,  Source | phosphofructokinase, muscle | 4179 | 0.040 | 0.4532 | No |
51 | CHST1 | CHST1 Entrez,  Source | carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 | 4227 | 0.039 | 0.4519 | No |
52 | LAMP2 | LAMP2 Entrez,  Source | lysosomal-associated membrane protein 2 | 4280 | 0.038 | 0.4502 | No |
53 | CTSC | CTSC Entrez,  Source | cathepsin C | 4468 | 0.035 | 0.4382 | No |
54 | SELP | SELP Entrez,  Source | selectin P (granule membrane protein 140kDa, antigen CD62) | 4741 | 0.029 | 0.4193 | No |
55 | ACTA2 | ACTA2 Entrez,  Source | actin, alpha 2, smooth muscle, aorta | 4827 | 0.027 | 0.4145 | No |
56 | LPHN2 | LPHN2 Entrez,  Source | latrophilin 2 | 4982 | 0.024 | 0.4044 | No |
57 | SRPX | SRPX Entrez,  Source | sushi-repeat-containing protein, X-linked | 5153 | 0.021 | 0.3928 | No |
58 | PRG1 | PRG1 Entrez,  Source | proteoglycan 1, secretory granule | 5264 | 0.019 | 0.3856 | No |
59 | IL6 | IL6 Entrez,  Source | interleukin 6 (interferon, beta 2) | 5285 | 0.019 | 0.3852 | No |
60 | NISCH | NISCH Entrez,  Source | nischarin | 5332 | 0.018 | 0.3828 | No |
61 | CLU | CLU Entrez,  Source | clusterin | 5443 | 0.016 | 0.3754 | No |
62 | MVP | MVP Entrez,  Source | major vault protein | 6049 | 0.004 | 0.3300 | No |
63 | CDH2 | CDH2 Entrez,  Source | cadherin 2, type 1, N-cadherin (neuronal) | 6122 | 0.003 | 0.3247 | No |
64 | TACSTD2 | TACSTD2 Entrez,  Source | tumor-associated calcium signal transducer 2 | 6245 | 0.001 | 0.3156 | No |
65 | PFN2 | PFN2 Entrez,  Source | profilin 2 | 6281 | 0.000 | 0.3129 | No |
66 | TPM1 | TPM1 Entrez,  Source | tropomyosin 1 (alpha) | 6293 | -0.000 | 0.3121 | No |
67 | RAC2 | RAC2 Entrez,  Source | ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) | 6381 | -0.001 | 0.3056 | No |
68 | CAP2 | CAP2 Entrez,  Source | CAP, adenylate cyclase-associated protein, 2 (yeast) | 6484 | -0.003 | 0.2981 | No |
69 | ICAM1 | ICAM1 Entrez,  Source | intercellular adhesion molecule 1 (CD54), human rhinovirus receptor | 6591 | -0.005 | 0.2904 | No |
70 | JUN | JUN Entrez,  Source | jun oncogene | 6649 | -0.006 | 0.2865 | No |
71 | MT1A | MT1A Entrez,  Source | metallothionein 1A (functional) | 6765 | -0.008 | 0.2783 | No |
72 | PDLIM4 | PDLIM4 Entrez,  Source | PDZ and LIM domain 4 | 6797 | -0.009 | 0.2765 | No |
73 | ITGB5 | ITGB5 Entrez,  Source | integrin, beta 5 | 7282 | -0.018 | 0.2410 | No |
74 | CSPG2 | CSPG2 Entrez,  Source | chondroitin sulfate proteoglycan 2 (versican) | 7897 | -0.029 | 0.1963 | No |
75 | LYL1 | LYL1 Entrez,  Source | lymphoblastic leukemia derived sequence 1 | 7941 | -0.030 | 0.1948 | No |
76 | TFEC | TFEC Entrez,  Source | transcription factor EC | 8607 | -0.044 | 0.1472 | No |
77 | MT3 | MT3 Entrez,  Source | metallothionein 3 (growth inhibitory factor (neurotrophic)) | 8612 | -0.044 | 0.1495 | No |
78 | CDKN1A | CDKN1A Entrez,  Source | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 8685 | -0.045 | 0.1467 | No |
79 | PGF | PGF Entrez,  Source | placental growth factor, vascular endothelial growth factor-related protein | 8718 | -0.046 | 0.1470 | No |
80 | IL4R | IL4R Entrez,  Source | interleukin 4 receptor | 9312 | -0.058 | 0.1057 | No |
81 | ARL6IP5 | ARL6IP5 Entrez,  Source | ADP-ribosylation-like factor 6 interacting protein 5 | 9523 | -0.063 | 0.0935 | No |
82 | MLLT11 | MLLT11 Entrez,  Source | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 | 10269 | -0.083 | 0.0422 | No |
83 | FAP | FAP Entrez,  Source | fibroblast activation protein, alpha | 10470 | -0.089 | 0.0324 | No |
84 | TXNRD2 | TXNRD2 Entrez,  Source | thioredoxin reductase 2 | 10598 | -0.093 | 0.0283 | No |
85 | SELE | SELE Entrez,  Source | selectin E (endothelial adhesion molecule 1) | 10650 | -0.095 | 0.0301 | No |
86 | ANPEP | ANPEP Entrez,  Source | alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150) | 10917 | -0.106 | 0.0162 | No |
87 | TGM2 | TGM2 Entrez,  Source | transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) | 10955 | -0.107 | 0.0197 | No |
88 | SORD | SORD Entrez,  Source | sorbitol dehydrogenase | 11093 | -0.112 | 0.0160 | No |
89 | SLC6A8 | SLC6A8 Entrez,  Source | solute carrier family 6 (neurotransmitter transporter, creatine), member 8 | 11242 | -0.118 | 0.0118 | No |
90 | FHL2 | FHL2 Entrez,  Source | four and a half LIM domains 2 | 11359 | -0.123 | 0.0103 | No |
91 | CD44 | CD44 Entrez,  Source | CD44 molecule (Indian blood group) | 11461 | -0.127 | 0.0101 | No |
92 | SLC7A7 | SLC7A7 Entrez,  Source | solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 | 11894 | -0.150 | -0.0136 | No |
93 | PLAU | PLAU Entrez,  Source | plasminogen activator, urokinase | 12137 | -0.167 | -0.0220 | No |
94 | UCHL1 | UCHL1 Entrez,  Source | ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) | 12209 | -0.172 | -0.0173 | No |
95 | GADD45A | GADD45A Entrez,  Source | growth arrest and DNA-damage-inducible, alpha | 12556 | -0.205 | -0.0313 | No |
96 | NRCAM | NRCAM Entrez,  Source | neuronal cell adhesion molecule | 12687 | -0.222 | -0.0280 | No |
97 | GBP2 | GBP2 Entrez,  Source | guanylate binding protein 2, interferon-inducible | 12797 | -0.241 | -0.0220 | No |
98 | NMT2 | NMT2 Entrez,  Source | N-myristoyltransferase 2 | 12888 | -0.263 | -0.0133 | No |
99 | SERPINE1 | SERPINE1 Entrez,  Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 12951 | -0.277 | -0.0016 | No |
100 | SLC3A2 | SLC3A2 Entrez,  Source | solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 | 13274 | -0.526 | 0.0051 | No |