Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | JAIN_NEMO_DIFF |
| Enrichment Score (ES) | -0.43024227 |
| Normalized Enrichment Score (NES) | -1.3517573 |
| Nominal p-value | 0.09251101 |
| FDR q-value | 0.3588135 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | DECR1 | DECR1 Entrez, Source | 2,4-dienoyl CoA reductase 1, mitochondrial | 486 | 0.291 | 0.0219 | No |
| 2 | HRSP12 | HRSP12 Entrez, Source | heat-responsive protein 12 | 654 | 0.244 | 0.0583 | No |
| 3 | FLT1 | FLT1 Entrez, Source | fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) | 835 | 0.207 | 0.0863 | No |
| 4 | PAWR | PAWR Entrez, Source | PRKC, apoptosis, WT1, regulator | 899 | 0.196 | 0.1209 | No |
| 5 | DCTN1 | DCTN1 Entrez, Source | dynactin 1 (p150, glued homolog, Drosophila) | 1578 | 0.130 | 0.0960 | No |
| 6 | TM7SF2 | TM7SF2 Entrez, Source | transmembrane 7 superfamily member 2 | 1828 | 0.115 | 0.1004 | No |
| 7 | NAP1L1 | NAP1L1 Entrez, Source | nucleosome assembly protein 1-like 1 | 3110 | 0.068 | 0.0178 | No |
| 8 | ARSB | ARSB Entrez, Source | arylsulfatase B | 4419 | 0.035 | -0.0734 | No |
| 9 | CTSC | CTSC Entrez, Source | cathepsin C | 4468 | 0.035 | -0.0701 | No |
| 10 | SPHK2 | SPHK2 Entrez, Source | sphingosine kinase 2 | 4673 | 0.031 | -0.0793 | No |
| 11 | PEX14 | PEX14 Entrez, Source | peroxisomal biogenesis factor 14 | 5041 | 0.023 | -0.1022 | No |
| 12 | BCAT2 | BCAT2 Entrez, Source | branched chain aminotransferase 2, mitochondrial | 6086 | 0.004 | -0.1799 | No |
| 13 | HK2 | HK2 Entrez, Source | hexokinase 2 | 6340 | -0.001 | -0.1988 | No |
| 14 | PMVK | PMVK Entrez, Source | phosphomevalonate kinase | 7592 | -0.023 | -0.2882 | No |
| 15 | RAD50 | RAD50 Entrez, Source | RAD50 homolog (S. cerevisiae) | 8016 | -0.032 | -0.3136 | No |
| 16 | PSMA2 | PSMA2 Entrez, Source | proteasome (prosome, macropain) subunit, alpha type, 2 | 9492 | -0.063 | -0.4119 | Yes |
| 17 | SYMPK | SYMPK Entrez, Source | symplekin | 9605 | -0.065 | -0.4072 | Yes |
| 18 | PSPH | PSPH Entrez, Source | phosphoserine phosphatase | 9762 | -0.069 | -0.4050 | Yes |
| 19 | BNIP3 | BNIP3 Entrez, Source | BCL2/adenovirus E1B 19kDa interacting protein 3 | 9855 | -0.073 | -0.3973 | Yes |
| 20 | TPD52L2 | TPD52L2 Entrez, Source | tumor protein D52-like 2 | 9979 | -0.076 | -0.3913 | Yes |
| 21 | SLC23A2 | SLC23A2 Entrez, Source | solute carrier family 23 (nucleobase transporters), member 2 | 10211 | -0.082 | -0.3922 | Yes |
| 22 | PRR3 | PRR3 Entrez, Source | proline rich 3 | 10589 | -0.093 | -0.4019 | Yes |
| 23 | LIG3 | LIG3 Entrez, Source | ligase III, DNA, ATP-dependent | 10605 | -0.094 | -0.3842 | Yes |
| 24 | CA2 | CA2 Entrez, Source | carbonic anhydrase II | 10759 | -0.099 | -0.3758 | Yes |
| 25 | PTPN7 | PTPN7 Entrez, Source | protein tyrosine phosphatase, non-receptor type 7 | 11047 | -0.110 | -0.3753 | Yes |
| 26 | XPO7 | XPO7 Entrez, Source | exportin 7 | 11138 | -0.114 | -0.3592 | Yes |
| 27 | ALG3 | ALG3 Entrez, Source | asparagine-linked glycosylation 3 homolog (S. cerevisiae, alpha-1,3-mannosyltransferase) | 12084 | -0.163 | -0.3975 | Yes |
| 28 | PLAU | PLAU Entrez, Source | plasminogen activator, urokinase | 12137 | -0.167 | -0.3679 | Yes |
| 29 | VEGF | VEGF Entrez, Source | vascular endothelial growth factor | 12221 | -0.173 | -0.3394 | Yes |
| 30 | DDX46 | DDX46 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 | 12388 | -0.187 | -0.3143 | Yes |
| 31 | FBL | FBL Entrez, Source | fibrillarin | 12456 | -0.194 | -0.2804 | Yes |
| 32 | TRMT1 | TRMT1 Entrez, Source | TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae) | 12654 | -0.218 | -0.2514 | Yes |
| 33 | SLC29A1 | SLC29A1 Entrez, Source | solute carrier family 29 (nucleoside transporters), member 1 | 13130 | -0.345 | -0.2178 | Yes |
| 34 | MRE11A | MRE11A Entrez, Source | MRE11 meiotic recombination 11 homolog A (S. cerevisiae) | 13163 | -0.372 | -0.1456 | Yes |
| 35 | TAP2 | TAP2 Entrez, Source | transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) | 13172 | -0.378 | -0.0704 | Yes |
| 36 | JAK2 | JAK2 Entrez, Source | Janus kinase 2 (a protein tyrosine kinase) | 13211 | -0.414 | 0.0098 | Yes |
