Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | LEE_CIP_UP |
| Enrichment Score (ES) | 0.7453544 |
| Normalized Enrichment Score (NES) | 2.225155 |
| Nominal p-value | 0.0 |
| FDR q-value | 4.9196486E-4 |
| FWER p-Value | 0.0020 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | VNN1 | VNN1 Entrez, Source | vanin 1 | 58 | 0.766 | 0.0701 | Yes |
| 2 | CD24 | CD24 Entrez, Source | CD24 molecule | 66 | 0.745 | 0.1421 | Yes |
| 3 | TM4SF4 | TM4SF4 Entrez, Source | transmembrane 4 L six family member 4 | 70 | 0.720 | 0.2120 | Yes |
| 4 | PEX11A | PEX11A Entrez, Source | peroxisomal biogenesis factor 11A | 86 | 0.682 | 0.2772 | Yes |
| 5 | COL4A1 | COL4A1 Entrez, Source | collagen, type IV, alpha 1 | 89 | 0.680 | 0.3431 | Yes |
| 6 | LPL | LPL Entrez, Source | lipoprotein lipase | 107 | 0.646 | 0.4047 | Yes |
| 7 | SLC24A3 | SLC24A3 Entrez, Source | solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 | 151 | 0.563 | 0.4563 | Yes |
| 8 | CTSE | CTSE Entrez, Source | cathepsin E | 284 | 0.411 | 0.4864 | Yes |
| 9 | PDK4 | PDK4 Entrez, Source | pyruvate dehydrogenase kinase, isozyme 4 | 285 | 0.410 | 0.5263 | Yes |
| 10 | PLAT | PLAT Entrez, Source | plasminogen activator, tissue | 321 | 0.383 | 0.5609 | Yes |
| 11 | RAB30 | RAB30 Entrez, Source | RAB30, member RAS oncogene family | 363 | 0.357 | 0.5926 | Yes |
| 12 | EHHADH | EHHADH Entrez, Source | enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase | 375 | 0.349 | 0.6257 | Yes |
| 13 | UCP2 | UCP2 Entrez, Source | uncoupling protein 2 (mitochondrial, proton carrier) | 443 | 0.313 | 0.6510 | Yes |
| 14 | ALDH3A2 | ALDH3A2 Entrez, Source | aldehyde dehydrogenase 3 family, member A2 | 526 | 0.277 | 0.6718 | Yes |
| 15 | MFGE8 | MFGE8 Entrez, Source | milk fat globule-EGF factor 8 protein | 542 | 0.272 | 0.6971 | Yes |
| 16 | IGFBP1 | IGFBP1 Entrez, Source | insulin-like growth factor binding protein 1 | 596 | 0.258 | 0.7182 | Yes |
| 17 | LEPR | LEPR Entrez, Source | leptin receptor | 685 | 0.238 | 0.7348 | Yes |
| 18 | MLYCD | MLYCD Entrez, Source | malonyl-CoA decarboxylase | 817 | 0.210 | 0.7454 | Yes |
| 19 | IGFBP2 | IGFBP2 Entrez, Source | insulin-like growth factor binding protein 2, 36kDa | 1556 | 0.131 | 0.7026 | No |
| 20 | BSG | BSG Entrez, Source | basigin (Ok blood group) | 2357 | 0.093 | 0.6516 | No |
| 21 | TES | TES Entrez, Source | testis derived transcript (3 LIM domains) | 3963 | 0.045 | 0.5354 | No |
| 22 | TFF3 | TFF3 Entrez, Source | trefoil factor 3 (intestinal) | 4594 | 0.032 | 0.4911 | No |
| 23 | DAB1 | DAB1 Entrez, Source | disabled homolog 1 (Drosophila) | 4974 | 0.025 | 0.4650 | No |
| 24 | LCN2 | LCN2 Entrez, Source | lipocalin 2 (oncogene 24p3) | 6435 | -0.002 | 0.3555 | No |
| 25 | CHKB | CHKB Entrez, Source | choline kinase beta | 8048 | -0.032 | 0.2375 | No |
| 26 | ADFP | ADFP Entrez, Source | adipose differentiation-related protein | 8468 | -0.041 | 0.2099 | No |
| 27 | S100A9 | S100A9 Entrez, Source | S100 calcium binding protein A9 | 8582 | -0.043 | 0.2056 | No |
| 28 | CDKN1A | CDKN1A Entrez, Source | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 8685 | -0.045 | 0.2024 | No |
| 29 | PMM1 | PMM1 Entrez, Source | phosphomannomutase 1 | 9435 | -0.061 | 0.1520 | No |
| 30 | SPON2 | SPON2 Entrez, Source | spondin 2, extracellular matrix protein | 10694 | -0.097 | 0.0669 | No |
| 31 | GATM | GATM Entrez, Source | glycine amidinotransferase (L-arginine:glycine amidinotransferase) | 10782 | -0.100 | 0.0701 | No |
| 32 | TGM2 | TGM2 Entrez, Source | transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) | 10955 | -0.107 | 0.0676 | No |
| 33 | BRCA1 | BRCA1 Entrez, Source | breast cancer 1, early onset | 11096 | -0.112 | 0.0679 | No |
| 34 | CD63 | CD63 Entrez, Source | CD63 molecule | 11299 | -0.120 | 0.0644 | No |
| 35 | FABP4 | FABP4 Entrez, Source | fatty acid binding protein 4, adipocyte | 11412 | -0.125 | 0.0682 | No |
| 36 | APCS | APCS Entrez, Source | amyloid P component, serum | 11626 | -0.135 | 0.0653 | No |
| 37 | C1ORF24 | C1ORF24 Entrez, Source | chromosome 1 open reading frame 24 | 12324 | -0.182 | 0.0306 | No |
| 38 | SLC16A1 | SLC16A1 Entrez, Source | solute carrier family 16, member 1 (monocarboxylic acid transporter 1) | 12730 | -0.229 | 0.0225 | No |
| 39 | NT5E | NT5E Entrez, Source | 5'-nucleotidase, ecto (CD73) | 12800 | -0.241 | 0.0407 | No |
