Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | MRNA_METABOLIC_PROCESS |
| Enrichment Score (ES) | -0.56044304 |
| Normalized Enrichment Score (NES) | -1.7569748 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.06740446 |
| FWER p-Value | 0.963 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | PPARGC1A | PPARGC1A Entrez, Source | peroxisome proliferative activated receptor, gamma, coactivator 1, alpha | 1066 | 0.174 | -0.0347 | No |
| 2 | ZFP36 | ZFP36 Entrez, Source | zinc finger protein 36, C3H type, homolog (mouse) | 2480 | 0.089 | -0.1178 | No |
| 3 | CUGBP1 | CUGBP1 Entrez, Source | CUG triplet repeat, RNA binding protein 1 | 4049 | 0.043 | -0.2243 | No |
| 4 | GEMIN6 | GEMIN6 Entrez, Source | gem (nuclear organelle) associated protein 6 | 4346 | 0.037 | -0.2369 | No |
| 5 | GRSF1 | GRSF1 Entrez, Source | G-rich RNA sequence binding factor 1 | 4464 | 0.035 | -0.2367 | No |
| 6 | NUDT21 | NUDT21 Entrez, Source | nudix (nucleoside diphosphate linked moiety X)-type motif 21 | 5776 | 0.009 | -0.3328 | No |
| 7 | CPSF3 | CPSF3 Entrez, Source | cleavage and polyadenylation specific factor 3, 73kDa | 6401 | -0.002 | -0.3792 | No |
| 8 | PHF5A | PHF5A Entrez, Source | PHD finger protein 5A | 6646 | -0.006 | -0.3959 | No |
| 9 | SPOP | SPOP Entrez, Source | speckle-type POZ protein | 6946 | -0.011 | -0.4154 | No |
| 10 | CDC2L1 | CDC2L1 Entrez, Source | cell division cycle 2-like 1 (PITSLRE proteins) | 7029 | -0.013 | -0.4182 | No |
| 11 | SLU7 | SLU7 Entrez, Source | - | 8593 | -0.043 | -0.5244 | No |
| 12 | SFRS8 | SFRS8 Entrez, Source | splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila) | 9013 | -0.052 | -0.5423 | No |
| 13 | KHDRBS1 | KHDRBS1 Entrez, Source | KH domain containing, RNA binding, signal transduction associated 1 | 9255 | -0.057 | -0.5456 | Yes |
| 14 | SFRS7 | SFRS7 Entrez, Source | splicing factor, arginine/serine-rich 7, 35kDa | 9277 | -0.058 | -0.5322 | Yes |
| 15 | SFRS5 | SFRS5 Entrez, Source | splicing factor, arginine/serine-rich 5 | 9303 | -0.058 | -0.5189 | Yes |
| 16 | SFRS9 | SFRS9 Entrez, Source | splicing factor, arginine/serine-rich 9 | 9480 | -0.062 | -0.5159 | Yes |
| 17 | EFTUD2 | EFTUD2 Entrez, Source | elongation factor Tu GTP binding domain containing 2 | 9796 | -0.071 | -0.5212 | Yes |
| 18 | PTBP1 | PTBP1 Entrez, Source | polypyrimidine tract binding protein 1 | 10089 | -0.079 | -0.5225 | Yes |
| 19 | SRPK1 | SRPK1 Entrez, Source | SFRS protein kinase 1 | 10252 | -0.083 | -0.5131 | Yes |
| 20 | PABPC1 | PABPC1 Entrez, Source | poly(A) binding protein, cytoplasmic 1 | 10349 | -0.086 | -0.4980 | Yes |
| 21 | GSPT1 | GSPT1 Entrez, Source | G1 to S phase transition 1 | 10578 | -0.093 | -0.4910 | Yes |
| 22 | SIP1 | SIP1 Entrez, Source | survival of motor neuron protein interacting protein 1 | 10840 | -0.103 | -0.4839 | Yes |
| 23 | SF3A2 | SF3A2 Entrez, Source | splicing factor 3a, subunit 2, 66kDa | 10842 | -0.103 | -0.4572 | Yes |
| 24 | CRNKL1 | CRNKL1 Entrez, Source | Crn, crooked neck-like 1 (Drosophila) | 11175 | -0.115 | -0.4521 | Yes |
| 25 | SMNDC1 | SMNDC1 Entrez, Source | survival motor neuron domain containing 1 | 11210 | -0.116 | -0.4244 | Yes |
| 26 | RNMT | RNMT Entrez, Source | RNA (guanine-7-) methyltransferase | 11293 | -0.120 | -0.3993 | Yes |
| 27 | SSB | SSB Entrez, Source | Sjogren syndrome antigen B (autoantigen La) | 11984 | -0.156 | -0.4105 | Yes |
| 28 | SFRS2 | SFRS2 Entrez, Source | splicing factor, arginine/serine-rich 2 | 12039 | -0.160 | -0.3729 | Yes |
| 29 | NCBP1 | NCBP1 Entrez, Source | nuclear cap binding protein subunit 1, 80kDa | 12145 | -0.168 | -0.3371 | Yes |
| 30 | DDX20 | DDX20 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 | 12161 | -0.169 | -0.2942 | Yes |
| 31 | KHSRP | KHSRP Entrez, Source | KH-type splicing regulatory protein (FUSE binding protein 2) | 12304 | -0.180 | -0.2580 | Yes |
| 32 | SFRS10 | SFRS10 Entrez, Source | splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila) | 12334 | -0.182 | -0.2128 | Yes |
| 33 | SF3A3 | SF3A3 Entrez, Source | splicing factor 3a, subunit 3, 60kDa | 12402 | -0.188 | -0.1688 | Yes |
| 34 | FUSIP1 | FUSIP1 Entrez, Source | FUS interacting protein (serine/arginine-rich) 1 | 12534 | -0.203 | -0.1259 | Yes |
| 35 | CSTF1 | CSTF1 Entrez, Source | cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa | 12665 | -0.219 | -0.0785 | Yes |
| 36 | DDX39 | DDX39 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 | 12732 | -0.229 | -0.0237 | Yes |
| 37 | SFPQ | SFPQ Entrez, Source | splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated) | 12901 | -0.267 | 0.0331 | Yes |
