Details for gene set NETPATH_ALPHA6_BETA4_INTEGRIN

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in class	double_gel_8d
GeneSet	NETPATH_ALPHA6_BETA4_INTEGRIN_PATHWAY
Enrichment Score (ES)	0.54554754
Normalized Enrichment Score (NES)	1.7037581
Nominal p-value	0.0017152659
FDR q-value	0.053800303
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	VIM	VIM Entrez, Source	vimentin	7	1.391	0.1841	Yes
2	LAMC2	LAMC2 Entrez, Source	laminin, gamma 2	23	1.021	0.3185	Yes
3	ITGB4	ITGB4 Entrez, Source	integrin, beta 4	266	0.426	0.3569	Yes
4	LAMA5	LAMA5 Entrez, Source	laminin, alpha 5	368	0.352	0.3960	Yes
5	LAMC1	LAMC1 Entrez, Source	laminin, gamma 1 (formerly LAMB2)	530	0.275	0.4203	Yes
6	LAMB2	LAMB2 Entrez, Source	laminin, beta 2 (laminin S)	590	0.260	0.4504	Yes
7	PAK1	PAK1 Entrez, Source	p21/Cdc42/Rac1-activated kinase 1 (STE20 homolog, yeast)	643	0.247	0.4792	Yes
8	ERBB2	ERBB2 Entrez, Source	v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	738	0.229	0.5025	Yes
9	RTKN	RTKN Entrez, Source	rhotekin	1233	0.158	0.4863	Yes
10	MMP7	MMP7 Entrez, Source	matrix metallopeptidase 7 (matrilysin, uterine)	1385	0.144	0.4940	Yes
11	PRKCA	PRKCA Entrez, Source	protein kinase C, alpha	1423	0.141	0.5099	Yes
12	YWHAQ	YWHAQ Entrez, Source	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	1447	0.139	0.5266	Yes
13	BAD	BAD Entrez, Source	BCL2-antagonist of cell death	1530	0.133	0.5380	Yes
14	AKT1	AKT1 Entrez, Source	v-akt murine thymoma viral oncogene homolog 1	1652	0.125	0.5455	Yes
15	AR	AR Entrez, Source	androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease)	1886	0.112	0.5429	No
16	FYN	FYN Entrez, Source	FYN oncogene related to SRC, FGR, YES	2623	0.083	0.4986	No
17	PIK3R3	PIK3R3 Entrez, Source	phosphoinositide-3-kinase, regulatory subunit 3 (p55, gamma)	2744	0.079	0.5000	No
18	LAMA3	LAMA3 Entrez, Source	laminin, alpha 3	3344	0.061	0.4631	No
19	CLCA2	CLCA2 Entrez, Source	chloride channel, calcium activated, family member 2	3350	0.061	0.4708	No
20	SRC	SRC Entrez, Source	v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	3420	0.060	0.4736	No
21	SMAD3	SMAD3 Entrez, Source	SMAD, mothers against DPP homolog 3 (Drosophila)	3790	0.050	0.4525	No
22	CASP3	CASP3 Entrez, Source	caspase 3, apoptosis-related cysteine peptidase	4606	0.032	0.3954	No
23	YWHAB	YWHAB Entrez, Source	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	6058	0.004	0.2868	No
24	SMAD2	SMAD2 Entrez, Source	SMAD, mothers against DPP homolog 2 (Drosophila)	6213	0.001	0.2753	No
25	PIK3R2	PIK3R2 Entrez, Source	phosphoinositide-3-kinase, regulatory subunit 2 (p85 beta)	6330	-0.001	0.2667	No
26	PTK2	PTK2 Entrez, Source	PTK2 protein tyrosine kinase 2	6465	-0.003	0.2570	No
27	EIF4E	EIF4E Entrez, Source	eukaryotic translation initiation factor 4E	6696	-0.007	0.2406	No
28	EIF4EBP1	EIF4EBP1 Entrez, Source	eukaryotic translation initiation factor 4E binding protein 1	6902	-0.011	0.2266	No
29	CD151	CD151 Entrez, Source	CD151 molecule (Raph blood group)	6998	-0.012	0.2210	No
30	ITGA6	ITGA6 Entrez, Source	integrin, alpha 6	7051	-0.013	0.2189	No
31	DSP	DSP Entrez, Source	desmoplakin	7304	-0.018	0.2023	No
32	NTN1	NTN1 Entrez, Source	netrin 1	7361	-0.019	0.2006	No
33	YWHAH	YWHAH Entrez, Source	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	7564	-0.023	0.1884	No
34	PRKCD	PRKCD Entrez, Source	protein kinase C, delta	7739	-0.026	0.1788	No
35	SHC1	SHC1 Entrez, Source	SHC (Src homology 2 domain containing) transforming protein 1	7776	-0.027	0.1797	No
36	PLEC1	PLEC1 Entrez, Source	plectin 1, intermediate filament binding protein 500kDa	8108	-0.034	0.1592	No
37	YWHAZ	YWHAZ Entrez, Source	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	8135	-0.034	0.1618	No
38	RHOA	RHOA Entrez, Source	ras homolog gene family, member A	8243	-0.036	0.1586	No
39	ITGB4BP	ITGB4BP Entrez, Source	integrin beta 4 binding protein	8401	-0.039	0.1520	No
40	YWHAE	YWHAE Entrez, Source	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	8704	-0.045	0.1353	No
41	RAC1	RAC1 Entrez, Source	ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	9101	-0.054	0.1127	No
42	PIK3CA	PIK3CA Entrez, Source	phosphoinositide-3-kinase, catalytic, alpha polypeptide	9133	-0.055	0.1176	No
43	RPSA	RPSA Entrez, Source	ribosomal protein SA	9241	-0.057	0.1171	No
44	PIK3CB	PIK3CB Entrez, Source	phosphoinositide-3-kinase, catalytic, beta polypeptide	9345	-0.059	0.1172	No
45	METAP2	METAP2 Entrez, Source	methionyl aminopeptidase 2	9592	-0.065	0.1073	No
46	IRS1	IRS1 Entrez, Source	insulin receptor substrate 1	11226	-0.117	-0.0000	No
47	PIK3R1	PIK3R1 Entrez, Source	phosphoinositide-3-kinase, regulatory subunit 1 (p85 alpha)	11304	-0.121	0.0102	No
48	GRB2	GRB2 Entrez, Source	growth factor receptor-bound protein 2	11803	-0.145	-0.0081	No
49	FRAP1	FRAP1 Entrez, Source	FK506 binding protein 12-rapamycin associated protein 1	11920	-0.151	0.0033	No
50	EGFR	EGFR Entrez, Source	epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)	12946	-0.276	-0.0372	No
51	LAMB3	LAMB3 Entrez, Source	laminin, beta 3	13259	-0.504	0.0062	No