Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_24h.class.cls
#double_gel_8d_versus_double_gel_24h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in classdouble_gel_24h
GeneSetNUCLEAR_PART
Enrichment Score (ES)-0.46233085
Normalized Enrichment Score (NES)-1.9724996
Nominal p-value0.0
FDR q-value0.012370943
FWER p-Value0.166
Table: GSEA Results Summary



Fig 1: Enrichment plot: NUCLEAR_PART   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NOL3NOL3
Entrez,  Source
nucleolar protein 3 (apoptosis repressor with CARD domain)2370.4540.0008No
2LMO4LMO4
Entrez,  Source
LIM domain only 48240.209-0.0353No
3PRICKLE1PRICKLE1
Entrez,  Source
prickle homolog 1 (Drosophila)9270.191-0.0351No
4PITX2PITX2
Entrez,  Source
paired-like homeodomain transcription factor 210470.177-0.0369No
5PPARGC1APPARGC1A
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, alpha10660.174-0.0310No
6RETSATRETSAT
Entrez,  Source
retinol saturase (all-trans-retinol 13,14-reductase)12100.160-0.0353No
7MSH3MSH3
Entrez,  Source
mutS homolog 3 (E. coli)13770.144-0.0419No
8SCRN1SCRN1
Entrez,  Source
secernin 115070.134-0.0462No
9BARD1BARD1
Entrez,  Source
BRCA1 associated RING domain 115110.134-0.0408No
10CIB1CIB1
Entrez,  Source
calcium and integrin binding 1 (calmyrin)16050.128-0.0426No
11MEN1MEN1
Entrez,  Source
multiple endocrine neoplasia I17050.122-0.0451No
12SMARCA2SMARCA2
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 218010.117-0.0475No
13HDAC7AHDAC7A
Entrez,  Source
histone deacetylase 7A21330.102-0.0685No
14RB1RB1
Entrez,  Source
retinoblastoma 1 (including osteosarcoma)21620.101-0.0665No
15CHEK2CHEK2
Entrez,  Source
CHK2 checkpoint homolog (S. pombe)21830.100-0.0638No
16NUP50NUP50
Entrez,  Source
nucleoporin 50kDa21900.100-0.0601No
17NAP1L2NAP1L2
Entrez,  Source
nucleosome assembly protein 1-like 222680.097-0.0620No
18BUB1BBUB1B
Entrez,  Source
BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast)22980.096-0.0602No
19PARP1PARP1
Entrez,  Source
poly (ADP-ribose) polymerase family, member 124740.089-0.0699No
20XRCC4XRCC4
Entrez,  Source
X-ray repair complementing defective repair in Chinese hamster cells 425990.083-0.0759No
21TERF2IPTERF2IP
Entrez,  Source
telomeric repeat binding factor 2, interacting protein26630.081-0.0773No
22TERTTERT
Entrez,  Source
telomerase reverse transcriptase27230.079-0.0785No
23PPARGC1BPPARGC1B
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, beta27820.077-0.0798No
24CDC26CDC26
Entrez,  Source
cell division cycle 2629610.072-0.0904No
25XRCC6XRCC6
Entrez,  Source
X-ray repair complementing defective repair in Chinese hamster cells 6 (Ku autoantigen, 70kDa)30800.069-0.0965No
26NAP1L1NAP1L1
Entrez,  Source
nucleosome assembly protein 1-like 131100.068-0.0959No
27TUBG1TUBG1
Entrez,  Source
tubulin, gamma 132000.066-0.1000No
28NFYBNFYB
Entrez,  Source
nuclear transcription factor Y, beta33420.061-0.1082No
29DEDDDEDD
Entrez,  Source
death effector domain containing35130.057-0.1188No
30HIF1AHIF1A
Entrez,  Source
hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)37150.052-0.1320No
31MCRS1MCRS1
Entrez,  Source
microspherule protein 137440.051-0.1320No
32PPP1R9BPPP1R9B
Entrez,  Source
protein phosphatase 1, regulatory subunit 9B, spinophilin38620.048-0.1389No
33HCLS1HCLS1
Entrez,  Source
hematopoietic cell-specific Lyn substrate 138720.048-0.1376No
34REPIN1REPIN1
Entrez,  Source
replication initiator 140320.044-0.1479No
35EXOSC9EXOSC9
Entrez,  Source
exosome component 940780.043-0.1496No
36NCR1NCR1
Entrez,  Source
natural cytotoxicity triggering receptor 140970.042-0.1492No
37PTF1APTF1A
Entrez,  Source
pancreas specific transcription factor, 1a41390.041-0.1506No
38REXO4REXO4
Entrez,  Source
REX4, RNA exonuclease 4 homolog (S. cerevisiae)41690.040-0.1512No
39BCL2BCL2
Entrez,  Source
B-cell CLL/lymphoma 241870.040-0.1508No
40TMPOTMPO
Entrez,  Source
thymopoietin42290.039-0.1523No
41HDAC3HDAC3
Entrez,  Source
histone deacetylase 342410.039-0.1516No
42NARFNARF
Entrez,  Source
nuclear prelamin A recognition factor43110.037-0.1553No
43GEMIN6GEMIN6
Entrez,  Source
gem (nuclear organelle) associated protein 643460.037-0.1563No
44ELL2ELL2
Entrez,  Source
elongation factor, RNA polymerase II, 243540.037-0.1554No
45ATRXATRX
Entrez,  Source
alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)45480.033-0.1687No
46CDKN2ACDKN2A
Entrez,  Source
cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)46100.032-0.1721No
47BREBRE
Entrez,  Source
brain and reproductive organ-expressed (TNFRSF1A modulator)46350.031-0.1726No
48SC65SC65
Entrez,  Source
-47190.030-0.1777No
49PSEN2PSEN2
Entrez,  Source
presenilin 2 (Alzheimer disease 4)47260.030-0.1769No
50ATXN1ATXN1
Entrez,  Source
ataxin 148450.027-0.1848No
51NAP1L4NAP1L4
Entrez,  Source
nucleosome assembly protein 1-like 450890.022-0.2024No
52TBPTBP
Entrez,  Source
TATA box binding protein51400.021-0.2054No
53MSH2MSH2
Entrez,  Source
mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)51620.021-0.2061No
54IKBKAPIKBKAP
Entrez,  Source
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein52260.020-0.2101No
55EPAS1EPAS1
Entrez,  Source
endothelial PAS domain protein 153060.019-0.2154No
56SUMO1SUMO1
Entrez,  Source
SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)54740.015-0.2275No
57TAF9TAF9
Entrez,  Source
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa55870.013-0.2355No
58GUCY2FGUCY2F
Entrez,  Source
guanylate cyclase 2F, retinal56420.012-0.2391No
59DHCR7DHCR7
Entrez,  Source
7-dehydrocholesterol reductase57280.010-0.2452No
60BNIP3LBNIP3L
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 3-like57290.010-0.2448No
61CDK9CDK9
Entrez,  Source
cyclin-dependent kinase 9 (CDC2-related kinase)57380.010-0.2449No
62NUDT21NUDT21
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 2157760.009-0.2474No
63ACTBACTB
Entrez,  Source
actin, beta57880.009-0.2478No
64SUB1SUB1
Entrez,  Source
SUB1 homolog (S. cerevisiae)58850.007-0.2549No
65RELARELA
Entrez,  Source
v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian)58920.007-0.2550No
66DNAJB9DNAJB9
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily B, member 960820.004-0.2693No
67DDX19BDDX19B
Entrez,  Source
DEAD (Asp-Glu-Ala-As) box polypeptide 19B61150.003-0.2716No
68ZCRB1ZCRB1
Entrez,  Source
zinc finger CCHC-type and RNA binding motif 161790.002-0.2764No
69SMAD2SMAD2
Entrez,  Source
SMAD, mothers against DPP homolog 2 (Drosophila)62130.001-0.2788No
70FGF18FGF18
Entrez,  Source
fibroblast growth factor 1862460.001-0.2813No
71NUP98NUP98
Entrez,  Source
nucleoporin 98kDa62680.000-0.2829No
72KLHL7KLHL7
Entrez,  Source
kelch-like 7 (Drosophila)62700.000-0.2829No
73GTF3C2GTF3C2
Entrez,  Source
general transcription factor IIIC, polypeptide 2, beta 110kDa6321-0.000-0.2867No
74ZBTB16ZBTB16
Entrez,  Source
zinc finger and BTB domain containing 166337-0.001-0.2878No
75CPSF3CPSF3
Entrez,  Source
cleavage and polyadenylation specific factor 3, 73kDa6401-0.002-0.2926No
76NPM2NPM2
Entrez,  Source
nucleophosmin/nucleoplasmin, 26472-0.003-0.2978No
77HSPD1HSPD1
Entrez,  Source
heat shock 60kDa protein 1 (chaperonin)6540-0.004-0.3027No
78SMARCD2SMARCD2
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 26556-0.005-0.3037No
79INTS6INTS6
Entrez,  Source
integrator complex subunit 66560-0.005-0.3037No
80NRMNRM
Entrez,  Source
nurim (nuclear envelope membrane protein)6596-0.006-0.3062No
81TAF6TAF6
Entrez,  Source
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa6603-0.006-0.3064No
82NFYCNFYC
Entrez,  Source
nuclear transcription factor Y, gamma6617-0.006-0.3071No
83PHF5APHF5A
Entrez,  Source
PHD finger protein 5A6646-0.006-0.3090No
84JUNJUN
Entrez,  Source
jun oncogene6649-0.006-0.3089No
85RGS12RGS12
Entrez,  Source
regulator of G-protein signalling 126660-0.007-0.3094No
86RTCD1RTCD1
Entrez,  Source
RNA terminal phosphate cyclase domain 16731-0.008-0.3144No
87NKX2-5NKX2-5
Entrez,  Source
NK2 transcription factor related, locus 5 (Drosophila)6915-0.011-0.3280No
88PNMA1PNMA1
Entrez,  Source
paraneoplastic antigen MA16990-0.012-0.3331No
89SMARCB1SMARCB1
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 17003-0.012-0.3335No
90SNRPNSNRPN
Entrez,  Source
small nuclear ribonucleoprotein polypeptide N7006-0.012-0.3332No
91TOP1TOP1
Entrez,  Source
topoisomerase (DNA) I7017-0.013-0.3334No
92PRM2PRM2
Entrez,  Source
protamine 27037-0.013-0.3343No
93OGG1OGG1
Entrez,  Source
8-oxoguanine DNA glycosylase7089-0.014-0.3376No
94GNAZGNAZ
Entrez,  Source
guanine nucleotide binding protein (G protein), alpha z polypeptide7190-0.016-0.3446No
95NFYANFYA
Entrez,  Source
nuclear transcription factor Y, alpha7202-0.016-0.3448No
96ZNF148ZNF148
Entrez,  Source
zinc finger protein 1487364-0.019-0.3563No
97GATAD2AGATAD2A
Entrez,  Source
GATA zinc finger domain containing 2A7397-0.020-0.3579No
98FOXE3FOXE3
Entrez,  Source
forkhead box E37406-0.020-0.3577No
99TAF11TAF11
Entrez,  Source
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa7434-0.020-0.3589No
100U2AF2U2AF2
Entrez,  Source
U2 small nuclear RNA auxiliary factor 27498-0.022-0.3628No
101SREBF1SREBF1
Entrez,  Source
sterol regulatory element binding transcription factor 17713-0.026-0.3781No
102PHBPHB
Entrez,  Source
prohibitin7736-0.026-0.3787No
103GCM1GCM1
Entrez,  Source
glial cells missing homolog 1 (Drosophila)7750-0.026-0.3786No
104CHAF1BCHAF1B
Entrez,  Source
chromatin assembly factor 1, subunit B (p60)7839-0.028-0.3842No
105COILCOIL
Entrez,  Source
coilin7869-0.029-0.3852No
106EMDEMD
Entrez,  Source
emerin (Emery-Dreifuss muscular dystrophy)7893-0.029-0.3858No
107SMAD4SMAD4
Entrez,  Source
SMAD, mothers against DPP homolog 4 (Drosophila)8001-0.031-0.3926No
108RAD50RAD50
Entrez,  Source
RAD50 homolog (S. cerevisiae)8016-0.032-0.3924No
109KPNA2KPNA2
Entrez,  Source
karyopherin alpha 2 (RAG cohort 1, importin alpha 1)8037-0.032-0.3926No
110TTNTTN
Entrez,  Source
titin8210-0.035-0.4043No
111HTATIPHTATIP
Entrez,  Source
HIV-1 Tat interacting protein, 60kDa8212-0.035-0.4029No
112KPNA3KPNA3
Entrez,  Source
karyopherin alpha 3 (importin alpha 4)8218-0.036-0.4018No
113SMARCA4SMARCA4
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 48251-0.036-0.4027No
114ATXN3ATXN3
Entrez,  Source
ataxin 38313-0.038-0.4058No
115UBE2IUBE2I
Entrez,  Source
ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)8446-0.040-0.4142No
116ANAPC4ANAPC4
Entrez,  Source
anaphase promoting complex subunit 48515-0.042-0.4177No
117SLU7SLU7
Entrez,  Source
-8593-0.043-0.4217No
118SMARCD3SMARCD3
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 38627-0.044-0.4224No
119HDAC5HDAC5
Entrez,  Source
histone deacetylase 58654-0.044-0.4226No
120STAG3STAG3
Entrez,  Source
stromal antigen 38660-0.045-0.4211No
121NBNNBN
Entrez,  Source
nibrin8672-0.045-0.4201No
122HOXC10HOXC10
Entrez,  Source
homeobox C108695-0.045-0.4199No
123H2AFYH2AFY
Entrez,  Source
H2A histone family, member Y8887-0.050-0.4324No
124GIT2GIT2
Entrez,  Source
G protein-coupled receptor kinase interactor 28964-0.051-0.4361No
125SAP18SAP18
Entrez,  Source
Sin3A-associated protein, 18kDa9025-0.052-0.4385No
126ASNA1ASNA1
Entrez,  Source
arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)9112-0.054-0.4428No
127DHX8DHX8
Entrez,  Source
DEAH (Asp-Glu-Ala-His) box polypeptide 89167-0.055-0.4446No
128GUCY2DGUCY2D
Entrez,  Source
guanylate cyclase 2D, membrane (retina-specific)9331-0.059-0.4546No
129THRAP3THRAP3
Entrez,  Source
thyroid hormone receptor associated protein 39349-0.059-0.4535No
130CDC23CDC23
Entrez,  Source
CDC23 (cell division cycle 23, yeast, homolog)9365-0.060-0.4521No
131RPL3RPL3
Entrez,  Source
ribosomal protein L39460-0.062-0.4567No
132NF2NF2
Entrez,  Source
neurofibromin 2 (bilateral acoustic neuroma)9513-0.063-0.4581No
133RALYRALY
Entrez,  Source
RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))9531-0.064-0.4568No
134SYMPKSYMPK
Entrez,  Source
symplekin9605-0.065-0.4596Yes
135HDAC2HDAC2
Entrez,  Source
histone deacetylase 29619-0.066-0.4579Yes
136HNRPKHNRPK
Entrez,  Source
heterogeneous nuclear ribonucleoprotein K9627-0.066-0.4557Yes
137KLHDC3KLHDC3
Entrez,  Source
kelch domain containing 39714-0.068-0.4594Yes
138DULLARDDULLARD
Entrez,  Source
dullard homolog (Xenopus laevis)9749-0.069-0.4591Yes
139HDAC6HDAC6
Entrez,  Source
histone deacetylase 69766-0.070-0.4574Yes
140DDX47DDX47
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 479773-0.070-0.4550Yes
141EFTUD2EFTUD2
Entrez,  Source
elongation factor Tu GTP binding domain containing 29796-0.071-0.4537Yes
142GRINL1AGRINL1A
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A9811-0.071-0.4518Yes
143GTF3C1GTF3C1
Entrez,  Source
general transcription factor IIIC, polypeptide 1, alpha 220kDa9814-0.071-0.4490Yes
144BNIP3BNIP3
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 39855-0.073-0.4491Yes
145PCGF6PCGF6
Entrez,  Source
polycomb group ring finger 69905-0.074-0.4497Yes
146PHF12PHF12
Entrez,  Source
PHD finger protein 129978-0.076-0.4521Yes
147SF3B4SF3B4
Entrez,  Source
splicing factor 3b, subunit 4, 49kDa9980-0.076-0.4490Yes
148MPGMPG
Entrez,  Source
N-methylpurine-DNA glycosylase10047-0.078-0.4508Yes
149MORF4L2MORF4L2
Entrez,  Source
mortality factor 4 like 210054-0.078-0.4480Yes
150COPS2COPS2
Entrez,  Source
COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)10059-0.078-0.4451Yes
151PTBP1PTBP1
Entrez,  Source
polypyrimidine tract binding protein 110089-0.079-0.4440Yes
152MATR3MATR3
Entrez,  Source
matrin 310114-0.079-0.4425Yes
153LBRLBR
Entrez,  Source
lamin B receptor10137-0.080-0.4409Yes
154SP140SP140
Entrez,  Source
SP140 nuclear body protein10141-0.080-0.4378Yes
155TPRTPR
Entrez,  Source
translocated promoter region (to activated MET oncogene)10142-0.080-0.4344Yes
156HNRPH1HNRPH1
Entrez,  Source
heterogeneous nuclear ribonucleoprotein H1 (H)10163-0.081-0.4326Yes
157EIF5AEIF5A
Entrez,  Source
eukaryotic translation initiation factor 5A10178-0.081-0.4303Yes
158TEP1TEP1
Entrez,  Source
telomerase-associated protein 110265-0.083-0.4334Yes
159NUAK2NUAK2
Entrez,  Source
NUAK family, SNF1-like kinase, 210275-0.084-0.4306Yes
160ERCC3ERCC3
Entrez,  Source
excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)10351-0.086-0.4328Yes
161HES6HES6
Entrez,  Source
hairy and enhancer of split 6 (Drosophila)10379-0.087-0.4312Yes
162LYARLYAR
Entrez,  Source
-10519-0.091-0.4381Yes
163LMNB1LMNB1
Entrez,  Source
lamin B110524-0.091-0.4346Yes
164CHEK1CHEK1
Entrez,  Source
CHK1 checkpoint homolog (S. pombe)10530-0.091-0.4312Yes
165NCOA6NCOA6
Entrez,  Source
nuclear receptor coactivator 610541-0.091-0.4282Yes
166SMC3SMC3
Entrez,  Source
structural maintenance of chromosomes 310571-0.092-0.4265Yes
167PAX8PAX8
Entrez,  Source
paired box gene 810584-0.093-0.4236Yes
168RPL35RPL35
Entrez,  Source
ribosomal protein L3510613-0.094-0.4218Yes
169SMC1ASMC1A
Entrez,  Source
structural maintenance of chromosomes 1A10658-0.096-0.4212Yes
170DDX24DDX24
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 2410660-0.096-0.4173Yes
171RANGAP1RANGAP1
Entrez,  Source
Ran GTPase activating protein 110704-0.097-0.4165Yes
172RPL11RPL11
Entrez,  Source
ribosomal protein L1110718-0.098-0.4135Yes
173GTF2H4GTF2H4
Entrez,  Source
general transcription factor IIH, polypeptide 4, 52kDa10727-0.098-0.4100Yes
174TAF2TAF2
Entrez,  Source
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa10729-0.098-0.4060Yes
175MRPL19MRPL19
Entrez,  Source
mitochondrial ribosomal protein L1910771-0.100-0.4050Yes
176SIP1SIP1
Entrez,  Source
survival of motor neuron protein interacting protein 110840-0.103-0.4059Yes
177SF3A2SF3A2
Entrez,  Source
splicing factor 3a, subunit 2, 66kDa10842-0.103-0.4017Yes
178CCNHCCNH
Entrez,  Source
cyclin H10890-0.105-0.4009Yes
179PAMPAM
Entrez,  Source
peptidylglycine alpha-amidating monooxygenase10944-0.106-0.4006Yes
180SNRPBSNRPB
Entrez,  Source
small nuclear ribonucleoprotein polypeptides B and B111009-0.109-0.4009Yes
181RAE1RAE1
Entrez,  Source
RAE1 RNA export 1 homolog (S. pombe)11085-0.111-0.4020Yes
182BRCA1BRCA1
Entrez,  Source
breast cancer 1, early onset11096-0.112-0.3982Yes
183LRPPRCLRPPRC
Entrez,  Source
leucine-rich PPR-motif containing11099-0.112-0.3936Yes
184XPO7XPO7
Entrez,  Source
exportin 711138-0.114-0.3918Yes
185HDAC10HDAC10
Entrez,  Source
histone deacetylase 1011193-0.116-0.3911Yes
186IMP4IMP4
Entrez,  Source
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)11201-0.116-0.3868Yes
187SMNDC1SMNDC1
Entrez,  Source
survival motor neuron domain containing 111210-0.116-0.3826Yes
188BNIP1BNIP1
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 111241-0.118-0.3800Yes
189GTF2F1GTF2F1
Entrez,  Source
general transcription factor IIF, polypeptide 1, 74kDa11265-0.119-0.3768Yes
190TP53TP53
Entrez,  Source
tumor protein p53 (Li-Fraumeni syndrome)11266-0.119-0.3718Yes
191RPS19RPS19
Entrez,  Source
ribosomal protein S1911310-0.121-0.3701Yes
192NUP107NUP107
Entrez,  Source
nucleoporin 107kDa11328-0.121-0.3663Yes
193RPP40RPP40
Entrez,  Source
ribonuclease P 40kDa subunit11331-0.122-0.3614Yes
194TDGTDG
Entrez,  Source
thymine-DNA glycosylase11393-0.124-0.3609Yes
195POLR3CPOLR3C
Entrez,  Source
polymerase (RNA) III (DNA directed) polypeptide C (62kD)11398-0.125-0.3560Yes
196TOP2ATOP2A
Entrez,  Source
topoisomerase (DNA) II alpha 170kDa11410-0.125-0.3517Yes
197NUTF2NUTF2
Entrez,  Source
nuclear transport factor 211453-0.127-0.3496Yes
198RPP38RPP38
Entrez,  Source
ribonuclease P/MRP 38kDa subunit11490-0.129-0.3470Yes
199PPIGPPIG
Entrez,  Source
peptidylprolyl isomerase G (cyclophilin G)11519-0.130-0.3437Yes
200DKC1DKC1
Entrez,  Source
dyskeratosis congenita 1, dyskerin11541-0.131-0.3399Yes
201NUP62NUP62
Entrez,  Source
nucleoporin 62kDa11546-0.131-0.3347Yes
202PSEN1PSEN1
Entrez,  Source
presenilin 1 (Alzheimer disease 3)11576-0.132-0.3314Yes
203RTN4RTN4
Entrez,  Source
reticulon 411618-0.135-0.3290Yes
204HNRPMHNRPM
Entrez,  Source
heterogeneous nuclear ribonucleoprotein M11632-0.135-0.3243Yes
205SENP2SENP2
Entrez,  Source
SUMO1/sentrin/SMT3 specific peptidase 211664-0.136-0.3210Yes
206RUVBL2RUVBL2
Entrez,  Source
RuvB-like 2 (E. coli)11685-0.137-0.3168Yes
207MED4MED4
Entrez,  Source
mediator of RNA polymerase II transcription, subunit 4 homolog (S. cerevisiae)11726-0.140-0.3141Yes
208SNUPNSNUPN
Entrez,  Source
snurportin 111760-0.142-0.3107Yes
209CLOCKCLOCK
Entrez,  Source
clock homolog (mouse)11770-0.143-0.3055Yes
210KPNA1KPNA1
Entrez,  Source
karyopherin alpha 1 (importin alpha 5)11791-0.144-0.3010Yes
211PTGER3PTGER3
Entrez,  Source
prostaglandin E receptor 3 (subtype EP3)11830-0.146-0.2978Yes
212NOC4LNOC4L
Entrez,  Source
nucleolar complex associated 4 homolog (S. cerevisiae)11861-0.148-0.2940Yes
213RBM39RBM39
Entrez,  Source
RNA binding motif protein 3911924-0.152-0.2924Yes
214ISG20ISG20
Entrez,  Source
interferon stimulated exonuclease gene 20kDa11943-0.153-0.2874Yes
215NUFIP1NUFIP1
Entrez,  Source
nuclear fragile X mental retardation protein interacting protein 111965-0.155-0.2826Yes
216ACTL6AACTL6A
Entrez,  Source
actin-like 6A11977-0.156-0.2769Yes
217NUP153NUP153
Entrez,  Source
nucleoporin 153kDa11979-0.156-0.2705Yes
218PRPF8PRPF8
Entrez,  Source
PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)11985-0.156-0.2644Yes
219RPA2RPA2
Entrez,  Source
replication protein A2, 32kDa12006-0.158-0.2594Yes
220ARID1BARID1B
Entrez,  Source
AT rich interactive domain 1B (SWI1-like)12024-0.159-0.2541Yes
221SFRS2SFRS2
Entrez,  Source
splicing factor, arginine/serine-rich 212039-0.160-0.2485Yes
222UBTFUBTF
Entrez,  Source
upstream binding transcription factor, RNA polymerase I12057-0.161-0.2431Yes
223MYBBP1AMYBBP1A
Entrez,  Source
MYB binding protein (P160) 1a12085-0.163-0.2383Yes
224NCBP1NCBP1
Entrez,  Source
nuclear cap binding protein subunit 1, 80kDa12145-0.168-0.2359Yes
225MKI67IPMKI67IP
Entrez,  Source
MKI67 (FHA domain) interacting nucleolar phosphoprotein12147-0.168-0.2290Yes
226CIRH1ACIRH1A
Entrez,  Source
cirrhosis, autosomal recessive 1A (cirhin)12177-0.170-0.2241Yes
227SPTBN4SPTBN4
Entrez,  Source
spectrin, beta, non-erythrocytic 412190-0.170-0.2179Yes
228FMR1FMR1
Entrez,  Source
fragile X mental retardation 112198-0.171-0.2114Yes
229NPM1NPM1
Entrez,  Source
nucleophosmin (nucleolar phosphoprotein B23, numatrin)12259-0.176-0.2086Yes
230DNMT3ADNMT3A
Entrez,  Source
DNA (cytosine-5-)-methyltransferase 3 alpha12263-0.177-0.2015Yes
231NAP1L3NAP1L3
Entrez,  Source
nucleosome assembly protein 1-like 312307-0.180-0.1973Yes
232SLC29A2SLC29A2
Entrez,  Source
solute carrier family 29 (nucleoside transporters), member 212332-0.182-0.1915Yes
233GNL3GNL3
Entrez,  Source
guanine nucleotide binding protein-like 3 (nucleolar)12347-0.183-0.1850Yes
234SF3A3SF3A3
Entrez,  Source
splicing factor 3a, subunit 3, 60kDa12402-0.188-0.1813Yes
235NUP88NUP88
Entrez,  Source
nucleoporin 88kDa12448-0.193-0.1767Yes
236HNRPFHNRPF
Entrez,  Source
heterogeneous nuclear ribonucleoprotein F12466-0.195-0.1699Yes
237KPNB1KPNB1
Entrez,  Source
karyopherin (importin) beta 112477-0.196-0.1625Yes
238FUSIP1FUSIP1
Entrez,  Source
FUS interacting protein (serine/arginine-rich) 112534-0.203-0.1583Yes
239NOL5ANOL5A
Entrez,  Source
nucleolar protein 5A (56kDa with KKE/D repeat)12614-0.213-0.1555Yes
240NOLC1NOLC1
Entrez,  Source
nucleolar and coiled-body phosphoprotein 112621-0.214-0.1471Yes
241TFIP11TFIP11
Entrez,  Source
tuftelin interacting protein 1112637-0.216-0.1392Yes
242ARNTLARNTL
Entrez,  Source
aryl hydrocarbon receptor nuclear translocator-like12653-0.218-0.1313Yes
243DYRK1ADYRK1A
Entrez,  Source
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A12656-0.218-0.1224Yes
244RUVBL1RUVBL1
Entrez,  Source
RuvB-like 1 (E. coli)12667-0.220-0.1140Yes
245DDX56DDX56
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5612725-0.229-0.1089Yes
246HNRPDLHNRPDL
Entrez,  Source
heterogeneous nuclear ribonucleoprotein D-like12742-0.232-0.1004Yes
247HMGA1HMGA1
Entrez,  Source
high mobility group AT-hook 112748-0.232-0.0912Yes
248SNRPASNRPA
Entrez,  Source
small nuclear ribonucleoprotein polypeptide A12756-0.234-0.0820Yes
249TIMELESSTIMELESS
Entrez,  Source
timeless homolog (Drosophila)12855-0.255-0.0788Yes
250NCLNCL
Entrez,  Source
nucleolin12857-0.256-0.0683Yes
251ASCC3L1ASCC3L1
Entrez,  Source
activating signal cointegrator 1 complex subunit 3-like 112968-0.282-0.0650Yes
252NUP54NUP54
Entrez,  Source
nucleoporin 54kDa13079-0.318-0.0601Yes
253MCM7MCM7
Entrez,  Source
MCM7 minichromosome maintenance deficient 7 (S. cerevisiae)13101-0.328-0.0481Yes
254XPO1XPO1
Entrez,  Source
exportin 1 (CRM1 homolog, yeast)13111-0.334-0.0349Yes
255MRE11AMRE11A
Entrez,  Source
MRE11 meiotic recombination 11 homolog A (S. cerevisiae)13163-0.372-0.0233Yes
256APTXAPTX
Entrez,  Source
aprataxin13232-0.441-0.0102Yes
257SDAD1SDAD1
Entrez,  Source
SDA1 domain containing 113234-0.4450.0083Yes
Table: GSEA details [plain text format]



Fig 2: NUCLEAR_PART   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NUCLEAR_PART: Random ES distribution   
Gene set null distribution of ES for NUCLEAR_PART