Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_24h.class.cls
#double_gel_8d_versus_double_gel_24h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in classdouble_gel_8d
GeneSetORGAN_DEVELOPMENT
Enrichment Score (ES)0.42695174
Normalized Enrichment Score (NES)1.766316
Nominal p-value0.0
FDR q-value0.035790574
FWER p-Value0.988
Table: GSEA Results Summary



Fig 1: Enrichment plot: ORGAN_DEVELOPMENT   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1COL1A2COL1A2
Entrez,  Source
collagen, type I, alpha 2121.2540.0329Yes
2LAMC2LAMC2
Entrez,  Source
laminin, gamma 2231.0210.0597Yes
3CTGFCTGF
Entrez,  Source
connective tissue growth factor370.8880.0827Yes
4TAGLNTAGLN
Entrez,  Source
transgelin400.8740.1061Yes
5ACTA1ACTA1
Entrez,  Source
actin, alpha 1, skeletal muscle600.7620.1252Yes
6COL5A2COL5A2
Entrez,  Source
collagen, type V, alpha 2610.7590.1457Yes
7MGPMGP
Entrez,  Source
matrix Gla protein1080.6440.1595Yes
8EMP1EMP1
Entrez,  Source
epithelial membrane protein 11190.6210.1755Yes
9FGFR3FGFR3
Entrez,  Source
fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism)1560.5540.1877Yes
10TMEM176BTMEM176B
Entrez,  Source
transmembrane protein 176B1680.5350.2013Yes
11GJB5GJB5
Entrez,  Source
gap junction protein, beta 5 (connexin 31.1)1710.5300.2155Yes
12PRELPPRELP
Entrez,  Source
proline/arginine-rich end leucine-rich repeat protein2290.4590.2235Yes
13KLF4KLF4
Entrez,  Source
Kruppel-like factor 4 (gut)2550.4370.2334Yes
14EGR2EGR2
Entrez,  Source
early growth response 2 (Krox-20 homolog, Drosophila)3120.3900.2396Yes
15SPRY2SPRY2
Entrez,  Source
sprouty homolog 2 (Drosophila)3140.3880.2500Yes
16PF4PF4
Entrez,  Source
platelet factor 4 (chemokine (C-X-C motif) ligand 4)3640.3570.2558Yes
17PLCE1PLCE1
Entrez,  Source
phospholipase C, epsilon 13960.3390.2626Yes
18CCL2CCL2
Entrez,  Source
chemokine (C-C motif) ligand 24050.3360.2710Yes
19CDH13CDH13
Entrez,  Source
cadherin 13, H-cadherin (heart)4170.3280.2791Yes
20BTDBTD
Entrez,  Source
biotinidase4270.3220.2871Yes
21SPARCSPARC
Entrez,  Source
secreted protein, acidic, cysteine-rich (osteonectin)4800.2920.2910Yes
22BMP2BMP2
Entrez,  Source
bone morphogenetic protein 25090.2820.2964Yes
23COL1A1COL1A1
Entrez,  Source
collagen, type I, alpha 15250.2770.3027Yes
24ALDH3A2ALDH3A2
Entrez,  Source
aldehyde dehydrogenase 3 family, member A25260.2770.3102Yes
25LAMC1LAMC1
Entrez,  Source
laminin, gamma 1 (formerly LAMB2)5300.2750.3174Yes
26IGFBP3IGFBP3
Entrez,  Source
insulin-like growth factor binding protein 35330.2740.3246Yes
27DHCR24DHCR24
Entrez,  Source
24-dehydrocholesterol reductase5610.2670.3298Yes
28FSTFST
Entrez,  Source
follistatin6780.2400.3273Yes
29FLI1FLI1
Entrez,  Source
Friend leukemia virus integration 17240.2310.3301Yes
30ERBB2ERBB2
Entrez,  Source
v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)7380.2290.3353Yes
31EBPEBP
Entrez,  Source
emopamil binding protein (sterol isomerase)7430.2280.3411Yes
32CITED2CITED2
Entrez,  Source
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 27930.2150.3432Yes
33PDPNPDPN
Entrez,  Source
podoplanin8030.2130.3482Yes
34PHGDHPHGDH
Entrez,  Source
phosphoglycerate dehydrogenase8100.2110.3535Yes
35TWIST1TWIST1
Entrez,  Source
twist homolog 1 (acrocephalosyndactyly 3; Saethre-Chotzen syndrome) (Drosophila)8130.2110.3590Yes
36MAFBMAFB
Entrez,  Source
v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)8560.2030.3613Yes
37MRASMRAS
Entrez,  Source
muscle RAS oncogene homolog8630.2010.3662Yes
38TGFB2TGFB2
Entrez,  Source
transforming growth factor, beta 29160.1930.3675Yes
39USH2AUSH2A
Entrez,  Source
Usher syndrome 2A (autosomal recessive, mild)9180.1920.3726Yes
40CTF1CTF1
Entrez,  Source
cardiotrophin 19360.1900.3764Yes
41FBN1FBN1
Entrez,  Source
fibrillin 19680.1870.3790Yes
42KLKL
Entrez,  Source
klotho9710.1860.3839Yes
43ANGPTL4ANGPTL4
Entrez,  Source
angiopoietin-like 49880.1840.3876Yes
44TLE2TLE2
Entrez,  Source
transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)10290.1790.3894Yes
45PITX2PITX2
Entrez,  Source
paired-like homeodomain transcription factor 210470.1770.3928Yes
46GHRGHR
Entrez,  Source
growth hormone receptor10570.1760.3969Yes
47COL18A1COL18A1
Entrez,  Source
collagen, type XVIII, alpha 111030.1700.3980Yes
48STSSTS
Entrez,  Source
steroid sulfatase (microsomal), arylsulfatase C, isozyme S11050.1700.4026Yes
49EIF2B2EIF2B2
Entrez,  Source
eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa11560.1640.4031Yes
50IGF2IGF2
Entrez,  Source
insulin-like growth factor 2 (somatomedin A)11900.1620.4050Yes
51KLK8KLK8
Entrez,  Source
kallikrein 8 (neuropsin/ovasin)12400.1570.4055Yes
52MYF6MYF6
Entrez,  Source
myogenic factor 6 (herculin)12750.1530.4070Yes
53CD4CD4
Entrez,  Source
CD4 molecule13150.1490.4080Yes
54FGF12FGF12
Entrez,  Source
fibroblast growth factor 1213340.1480.4106Yes
55HSD17B3HSD17B3
Entrez,  Source
hydroxysteroid (17-beta) dehydrogenase 313750.1440.4114Yes
56EIF2AK3EIF2AK3
Entrez,  Source
eukaryotic translation initiation factor 2-alpha kinase 313890.1430.4143Yes
57APOA5APOA5
Entrez,  Source
apolipoprotein A-V14860.1360.4106Yes
58PCSK9PCSK9
Entrez,  Source
proprotein convertase subtilisin/kexin type 915140.1340.4122Yes
59CSF1CSF1
Entrez,  Source
colony stimulating factor 1 (macrophage)16440.1260.4056Yes
60PROK2PROK2
Entrez,  Source
prokineticin 217570.1190.4002Yes
61MAPK12MAPK12
Entrez,  Source
mitogen-activated protein kinase 1217930.1170.4007Yes
62RASGRP4RASGRP4
Entrez,  Source
RAS guanyl releasing protein 418270.1160.4013Yes
63PTPRCPTPRC
Entrez,  Source
protein tyrosine phosphatase, receptor type, C18440.1150.4032Yes
64AGGF1AGGF1
Entrez,  Source
angiogenic factor with G patch and FHA domains 118460.1150.4062Yes
65BMP4BMP4
Entrez,  Source
bone morphogenetic protein 418700.1130.4075Yes
66LSRLSR
Entrez,  Source
lipolysis stimulated lipoprotein receptor18850.1120.4094Yes
67TNFRSF11BTNFRSF11B
Entrez,  Source
tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)19140.1110.4103Yes
68EREGEREG
Entrez,  Source
epiregulin19680.1090.4092Yes
69AESAES
Entrez,  Source
amino-terminal enhancer of split19890.1080.4105Yes
70CACNB2CACNB2
Entrez,  Source
calcium channel, voltage-dependent, beta 2 subunit19940.1080.4131Yes
71TIE1TIE1
Entrez,  Source
tyrosine kinase with immunoglobulin-like and EGF-like domains 120410.1060.4125Yes
72RHOBRHOB
Entrez,  Source
ras homolog gene family, member B20720.1050.4130Yes
73TGFB1TGFB1
Entrez,  Source
transforming growth factor, beta 1 (Camurati-Engelmann disease)20760.1050.4156Yes
74HDAC7AHDAC7A
Entrez,  Source
histone deacetylase 7A21330.1020.4140Yes
75POU1F1POU1F1
Entrez,  Source
POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1)21380.1020.4165Yes
76DSPPDSPP
Entrez,  Source
dentin sialophosphoprotein21630.1010.4174Yes
77POU6F1POU6F1
Entrez,  Source
POU domain, class 6, transcription factor 121770.1000.4191Yes
78GATA6GATA6
Entrez,  Source
GATA binding protein 622060.0990.4196Yes
79RAB3DRAB3D
Entrez,  Source
RAB3D, member RAS oncogene family22070.0990.4223Yes
80RBP2RBP2
Entrez,  Source
retinol binding protein 2, cellular22500.0970.4217Yes
81SGCESGCE
Entrez,  Source
sarcoglycan, epsilon22740.0960.4225Yes
82IL2IL2
Entrez,  Source
interleukin 222820.0960.4246Yes
83SGCGSGCG
Entrez,  Source
sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)23350.0940.4231Yes
84PPT1PPT1
Entrez,  Source
palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile)23530.0930.4243Yes
85SERPINF1SERPINF1
Entrez,  Source
serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 123610.0930.4263Yes
86SMTNSMTN
Entrez,  Source
smoothelin23860.0920.4270Yes
87AHSGAHSG
Entrez,  Source
alpha-2-HS-glycoprotein24670.0890.4232No
88DGCR2DGCR2
Entrez,  Source
DiGeorge syndrome critical region gene 226020.0830.4152No
89BRAFBRAF
Entrez,  Source
v-raf murine sarcoma viral oncogene homolog B126050.0830.4173No
90SCINSCIN
Entrez,  Source
scinderin27090.0800.4115No
91BLNKBLNK
Entrez,  Source
B-cell linker27430.0790.4111No
92TWIST2TWIST2
Entrez,  Source
twist homolog 2 (Drosophila)27570.0780.4122No
93HRASHRAS
Entrez,  Source
v-Ha-ras Harvey rat sarcoma viral oncogene homolog27610.0780.4141No
94FGF10FGF10
Entrez,  Source
fibroblast growth factor 1027650.0780.4160No
95MEPEMEPE
Entrez,  Source
matrix, extracellular phosphoglycoprotein with ASARM motif (bone)27750.0780.4174No
96OTX2OTX2
Entrez,  Source
orthodenticle homolog 2 (Drosophila)28310.0760.4152No
97MKKSMKKS
Entrez,  Source
McKusick-Kaufman syndrome28770.0750.4138No
98ROBO2ROBO2
Entrez,  Source
roundabout, axon guidance receptor, homolog 2 (Drosophila)28810.0750.4155No
99GHSRGHSR
Entrez,  Source
growth hormone secretagogue receptor29070.0740.4156No
100MBNL1MBNL1
Entrez,  Source
muscleblind-like (Drosophila)29300.0730.4159No
101VAMP5VAMP5
Entrez,  Source
vesicle-associated membrane protein 5 (myobrevin)29370.0730.4174No
102COL11A1COL11A1
Entrez,  Source
collagen, type XI, alpha 129810.0720.4161No
103FOXC2FOXC2
Entrez,  Source
forkhead box C2 (MFH-1, mesenchyme forkhead 1)30270.0700.4145No
104FOXG130320.0700.4161No
105ALAS2ALAS2
Entrez,  Source
aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia)31030.0680.4125No
106DFNB31DFNB31
Entrez,  Source
deafness, autosomal recessive 3131500.0670.4108No
107FGF7FGF7
Entrez,  Source
fibroblast growth factor 7 (keratinocyte growth factor)31880.0660.4098No
108FGF2FGF2
Entrez,  Source
fibroblast growth factor 2 (basic)32100.0650.4099No
109FGD1FGD1
Entrez,  Source
FYVE, RhoGEF and PH domain containing 1 (faciogenital dysplasia)32180.0650.4111No
110CNTN4CNTN4
Entrez,  Source
contactin 433190.0620.4051No
111COL4A4COL4A4
Entrez,  Source
collagen, type IV, alpha 433200.0620.4068No
112BTG1BTG1
Entrez,  Source
B-cell translocation gene 1, anti-proliferative33290.0620.4079No
113LAMA3LAMA3
Entrez,  Source
laminin, alpha 333440.0610.4085No
114ATP2C1ATP2C1
Entrez,  Source
ATPase, Ca++ transporting, type 2C, member 133610.0610.4089No
115IL10IL10
Entrez,  Source
interleukin 1034390.0590.4046No
116PLAC1PLAC1
Entrez,  Source
placenta-specific 134680.0590.4040No
117PITX3PITX3
Entrez,  Source
paired-like homeodomain transcription factor 334700.0590.4055No
118IFRD1IFRD1
Entrez,  Source
interferon-related developmental regulator 134720.0580.4070No
119IL18IL18
Entrez,  Source
interleukin 18 (interferon-gamma-inducing factor)35030.0570.4062No
120POU2F3POU2F3
Entrez,  Source
POU domain, class 2, transcription factor 335080.0570.4075No
121ACVRL1ACVRL1
Entrez,  Source
activin A receptor type II-like 135200.0570.4082No
122GHRHRGHRHR
Entrez,  Source
growth hormone releasing hormone receptor35440.0560.4079No
123GAAGAA
Entrez,  Source
glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II)35470.0560.4093No
124KCNH1KCNH1
Entrez,  Source
potassium voltage-gated channel, subfamily H (eag-related), member 135960.0550.4071No
125CHRNA1CHRNA1
Entrez,  Source
cholinergic receptor, nicotinic, alpha 1 (muscle)36100.0540.4076No
126EGR3EGR3
Entrez,  Source
early growth response 337040.0520.4018No
127CDK6CDK6
Entrez,  Source
cyclin-dependent kinase 637250.0520.4017No
128CARTPTCARTPT
Entrez,  Source
CART prepropeptide37690.0510.3997No
129TINAGTINAG
Entrez,  Source
tubulointerstitial nephritis antigen37700.0510.4011No
130MALMAL
Entrez,  Source
mal, T-cell differentiation protein38220.0500.3985No
131NPPBNPPB
Entrez,  Source
natriuretic peptide precursor B38650.0480.3966No
132HCLS1HCLS1
Entrez,  Source
hematopoietic cell-specific Lyn substrate 138720.0480.3974No
133CHRNA7CHRNA7
Entrez,  Source
cholinergic receptor, nicotinic, alpha 739360.0460.3939No
134LHBLHB
Entrez,  Source
luteinizing hormone beta polypeptide39470.0460.3943No
135DMRT1DMRT1
Entrez,  Source
doublesex and mab-3 related transcription factor 139810.0450.3930No
136TGFB3TGFB3
Entrez,  Source
transforming growth factor, beta 341130.0420.3841No
137MYH3MYH3
Entrez,  Source
myosin, heavy chain 3, skeletal muscle, embryonic41220.0420.3846No
138PTF1APTF1A
Entrez,  Source
pancreas specific transcription factor, 1a41390.0410.3845No
139GYLTL1BGYLTL1B
Entrez,  Source
glycosyltransferase-like 1B41780.0400.3826No
140RUNX2RUNX2
Entrez,  Source
runt-related transcription factor 242460.0390.3785No
141NKX6-1NKX6-1
Entrez,  Source
NK6 transcription factor related, locus 1 (Drosophila)43060.0370.3750No
142SLIT2SLIT2
Entrez,  Source
slit homolog 2 (Drosophila)43300.0370.3742No
143NOTCH4NOTCH4
Entrez,  Source
Notch homolog 4 (Drosophila)43870.0360.3709No
144THY1THY1
Entrez,  Source
Thy-1 cell surface antigen44780.0340.3649No
145PAX4PAX4
Entrez,  Source
paired box gene 444960.0340.3645No
146ETS1ETS1
Entrez,  Source
v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)44980.0340.3654No
147IGFBP4IGFBP4
Entrez,  Source
insulin-like growth factor binding protein 445780.0320.3602No
148PTHLHPTHLH
Entrez,  Source
parathyroid hormone-like hormone45950.0320.3598No
149EYA2EYA2
Entrez,  Source
eyes absent homolog 2 (Drosophila)46190.0320.3589No
150SUFUSUFU
Entrez,  Source
suppressor of fused homolog (Drosophila)46530.0310.3572No
151NDUFS4NDUFS4
Entrez,  Source
NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)47670.0290.3493No
152FOXE1FOXE1
Entrez,  Source
forkhead box E1 (thyroid transcription factor 2)48410.0270.3444No
153UNC5CUNC5C
Entrez,  Source
unc-5 homolog C (C. elegans)48660.0270.3433No
154GDF11GDF11
Entrez,  Source
growth differentiation factor 1151210.0220.3244No
155CSRP3CSRP3
Entrez,  Source
cysteine and glycine-rich protein 3 (cardiac LIM protein)51320.0220.3242No
156TBX5TBX5
Entrez,  Source
T-box 551410.0210.3242No
157CRXCRX
Entrez,  Source
cone-rod homeobox51480.0210.3243No
158VAX2VAX2
Entrez,  Source
ventral anterior homeobox 251630.0210.3238No
159MYST3MYST3
Entrez,  Source
MYST histone acetyltransferase (monocytic leukemia) 352130.0200.3206No
160CHRDCHRD
Entrez,  Source
chordin52860.0190.3155No
161PITPNM1PITPNM1
Entrez,  Source
phosphatidylinositol transfer protein, membrane-associated 152960.0190.3154No
162MYEF2MYEF2
Entrez,  Source
myelin expression factor 253020.0190.3155No
163UGCGUGCG
Entrez,  Source
UDP-glucose ceramide glucosyltransferase53840.0170.3097No
164MYH7MYH7
Entrez,  Source
myosin, heavy chain 7, cardiac muscle, beta54440.0160.3056No
165GATA4GATA4
Entrez,  Source
GATA binding protein 455260.0140.2998No
166PPARDPPARD
Entrez,  Source
peroxisome proliferative activated receptor, delta55320.0140.2998No
167DMP1DMP1
Entrez,  Source
dentin matrix acidic phosphoprotein55450.0140.2992No
168TLE3TLE3
Entrez,  Source
transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)56430.0120.2921No
169TBX3TBX3
Entrez,  Source
T-box 3 (ulnar mammary syndrome)58690.0080.2750No
170MUSKMUSK
Entrez,  Source
muscle, skeletal, receptor tyrosine kinase59210.0070.2713No
171CASRCASR
Entrez,  Source
calcium-sensing receptor (hypocalciuric hypercalcemia 1, severe neonatal hyperparathyroidism)60390.0040.2624No
172SPP2SPP2
Entrez,  Source
secreted phosphoprotein 2, 24kDa60540.0040.2615No
173SRD5A2SRD5A2
Entrez,  Source
steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)61100.0030.2573No
174COL9A1COL9A1
Entrez,  Source
collagen, type IX, alpha 161310.0030.2559No
175FLOT2FLOT2
Entrez,  Source
flotillin 261400.0020.2553No
176EGFL7EGFL7
Entrez,  Source
EGF-like-domain, multiple 761960.0010.2511No
177UTRNUTRN
Entrez,  Source
utrophin (homologous to dystrophin)62120.0010.2500No
178SMAD2SMAD2
Entrez,  Source
SMAD, mothers against DPP homolog 2 (Drosophila)62130.0010.2500No
179GLI1GLI1
Entrez,  Source
glioma-associated oncogene homolog 1 (zinc finger protein)62390.0010.2481No
180LHX1LHX1
Entrez,  Source
LIM homeobox 162580.0000.2467No
181PTHR1PTHR1
Entrez,  Source
parathyroid hormone receptor 162710.0000.2458No
182MSX1MSX1
Entrez,  Source
msh homeobox homolog 1 (Drosophila)6299-0.0000.2438No
183SIX3SIX3
Entrez,  Source
sine oculis homeobox homolog 3 (Drosophila)6316-0.0000.2425No
184ZBTB16ZBTB16
Entrez,  Source
zinc finger and BTB domain containing 166337-0.0010.2410No
185SCG2SCG2
Entrez,  Source
secretogranin II (chromogranin C)6379-0.0010.2379No
186TNFSF12TNFSF12
Entrez,  Source
tumor necrosis factor (ligand) superfamily, member 126483-0.0030.2301No
187MTM1MTM1
Entrez,  Source
myotubularin 16543-0.0050.2257No
188IL17FIL17F
Entrez,  Source
interleukin 17F6554-0.0050.2250No
189BMP1BMP1
Entrez,  Source
bone morphogenetic protein 16563-0.0050.2246No
190DVL1DVL1
Entrez,  Source
dishevelled, dsh homolog 1 (Drosophila)6668-0.0070.2168No
191HAND2HAND2
Entrez,  Source
heart and neural crest derivatives expressed 26680-0.0070.2161No
192ACVR1ACVR1
Entrez,  Source
activin A receptor, type I6711-0.0070.2140No
193MYH6MYH6
Entrez,  Source
myosin, heavy chain 6, cardiac muscle, alpha (cardiomyopathy, hypertrophic 1)6716-0.0070.2139No
194NNATNNAT
Entrez,  Source
neuronatin6767-0.0080.2103No
195PAX3PAX3
Entrez,  Source
paired box gene 3 (Waardenburg syndrome 1)6824-0.0090.2062No
196ZIC1ZIC1
Entrez,  Source
Zic family member 1 (odd-paired homolog, Drosophila)6837-0.0090.2055No
197FABP1FABP1
Entrez,  Source
fatty acid binding protein 1, liver6898-0.0100.2012No
198SNRKSNRK
Entrez,  Source
SNF related kinase6919-0.0110.2000No
199SFTPBSFTPB
Entrez,  Source
surfactant, pulmonary-associated protein B6951-0.0110.1979No
200SYKSYK
Entrez,  Source
spleen tyrosine kinase7042-0.0130.1913No
201NOTCH1NOTCH1
Entrez,  Source
Notch homolog 1, translocation-associated (Drosophila)7067-0.0140.1899No
202SPHK1SPHK1
Entrez,  Source
sphingosine kinase 17090-0.0140.1886No
203SOD1SOD1
Entrez,  Source
superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult))7093-0.0140.1888No
204CALCACALCA
Entrez,  Source
calcitonin/calcitonin-related polypeptide, alpha7138-0.0140.1858No
205MYOD1MYOD1
Entrez,  Source
myogenic differentiation 17147-0.0150.1856No
206DCNDCN
Entrez,  Source
decorin7217-0.0160.1807No
207ITGA7ITGA7
Entrez,  Source
integrin, alpha 77298-0.0180.1750No
208DSPDSP
Entrez,  Source
desmoplakin7304-0.0180.1751No
209ELNELN
Entrez,  Source
elastin (supravalvular aortic stenosis, Williams-Beuren syndrome)7315-0.0180.1749No
210CRABP2CRABP2
Entrez,  Source
cellular retinoic acid binding protein 27366-0.0190.1715No
211TCF21TCF21
Entrez,  Source
transcription factor 217391-0.0200.1702No
212CACNA1HCACNA1H
Entrez,  Source
calcium channel, voltage-dependent, alpha 1H subunit7393-0.0200.1707No
213NR0B1NR0B1
Entrez,  Source
nuclear receptor subfamily 0, group B, member 17399-0.0200.1708No
214CMKLR1CMKLR1
Entrez,  Source
chemokine-like receptor 17408-0.0200.1708No
215ELF3ELF3
Entrez,  Source
E74-like factor 3 (ets domain transcription factor, epithelial-specific )7442-0.0210.1688No
216CDK5R1CDK5R1
Entrez,  Source
cyclin-dependent kinase 5, regulatory subunit 1 (p35)7459-0.0210.1681No
217SFTPDSFTPD
Entrez,  Source
surfactant, pulmonary-associated protein D7540-0.0220.1626No
218TNNI3TNNI3
Entrez,  Source
troponin I type 3 (cardiac)7549-0.0230.1626No
219SPEGSPEG
Entrez,  Source
SPEG complex locus7555-0.0230.1628No
220NPR3NPR3
Entrez,  Source
natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)7707-0.0250.1519No
221PAX6PAX6
Entrez,  Source
paired box gene 6 (aniridia, keratitis)7732-0.0260.1507No
222COL12A1COL12A1
Entrez,  Source
collagen, type XII, alpha 17756-0.0260.1497No
223INHBAINHBA
Entrez,  Source
inhibin, beta A (activin A, activin AB alpha polypeptide)7768-0.0270.1496No
224DYRK3DYRK3
Entrez,  Source
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 37808-0.0280.1473No
225EMCNEMCN
Entrez,  Source
endomucin7816-0.0280.1475No
226FGFR1FGFR1
Entrez,  Source
fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome)7859-0.0280.1451No
227ALKALK
Entrez,  Source
anaplastic lymphoma kinase (Ki-1)7870-0.0290.1451No
228SIRT2SIRT2
Entrez,  Source
sirtuin (silent mating type information regulation 2 homolog) 2 (S. cerevisiae)7882-0.0290.1450No
229EMDEMD
Entrez,  Source
emerin (Emery-Dreifuss muscular dystrophy)7893-0.0290.1450No
230DLL3DLL3
Entrez,  Source
delta-like 3 (Drosophila)7929-0.0300.1431No
231SECTM1SECTM1
Entrez,  Source
secreted and transmembrane 17983-0.0310.1399No
232ANXA2ANXA2
Entrez,  Source
annexin A28088-0.0330.1328No
233EIF2B4EIF2B4
Entrez,  Source
eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa8097-0.0330.1331No
234SHHSHH
Entrez,  Source
sonic hedgehog homolog (Drosophila)8114-0.0340.1328No
235IL12BIL12B
Entrez,  Source
interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)8161-0.0350.1302No
236UBBUBB
Entrez,  Source
ubiquitin B8206-0.0350.1278No
237TTNTTN
Entrez,  Source
titin8210-0.0350.1285No
238MYH11MYH11
Entrez,  Source
myosin, heavy chain 11, smooth muscle8278-0.0370.1243No
239MDKMDK
Entrez,  Source
midkine (neurite growth-promoting factor 2)8318-0.0380.1224No
240HAND1HAND1
Entrez,  Source
heart and neural crest derivatives expressed 18367-0.0390.1197No
241NME2NME2
Entrez,  Source
non-metastatic cells 2, protein (NM23B) expressed in8426-0.0400.1163No
242INHAINHA
Entrez,  Source
inhibin, alpha8428-0.0400.1173No
243SHOX2SHOX2
Entrez,  Source
short stature homeobox 28562-0.0430.1083No
244ACIN1ACIN1
Entrez,  Source
apoptotic chromatin condensation inducer 18577-0.0430.1083No
245ATP2A2ATP2A2
Entrez,  Source
ATPase, Ca++ transporting, cardiac muscle, slow twitch 28616-0.0440.1066No
246HCKHCK
Entrez,  Source
hemopoietic cell kinase8632-0.0440.1066No
247HDAC5HDAC5
Entrez,  Source
histone deacetylase 58654-0.0440.1062No
248ECE2ECE2
Entrez,  Source
endothelin converting enzyme 28825-0.0480.0945No
249CDC42CDC42
Entrez,  Source
cell division cycle 42 (GTP binding protein, 25kDa)8893-0.0500.0907No
250MATKMATK
Entrez,  Source
megakaryocyte-associated tyrosine kinase8917-0.0500.0903No
251PTCH1PTCH1
Entrez,  Source
patched homolog 1 (Drosophila)8949-0.0510.0892No
252HMGCRHMGCR
Entrez,  Source
3-hydroxy-3-methylglutaryl-Coenzyme A reductase8972-0.0510.0889No
253NPR1NPR1
Entrez,  Source
natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)9076-0.0530.0825No
254PLGPLG
Entrez,  Source
plasminogen9113-0.0540.0812No
255IGF1IGF1
Entrez,  Source
insulin-like growth factor 1 (somatomedin C)9134-0.0550.0811No
256COMPCOMP
Entrez,  Source
cartilage oligomeric matrix protein9154-0.0550.0811No
257IL7IL7
Entrez,  Source
interleukin 79178-0.0550.0809No
258CANXCANX
Entrez,  Source
calnexin9223-0.0570.0790No
259PTHPTH
Entrez,  Source
parathyroid hormone9224-0.0570.0805No
260PRLPRL
Entrez,  Source
prolactin9231-0.0570.0816No
261CSDE1CSDE1
Entrez,  Source
cold shock domain containing E1, RNA-binding9265-0.0570.0806No
262CASQ2CASQ2
Entrez,  Source
calsequestrin 2 (cardiac muscle)9360-0.0600.0750No
263COL2A1COL2A1
Entrez,  Source
collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital)9434-0.0610.0710No
264CENTA2CENTA2
Entrez,  Source
centaurin, alpha 29496-0.0630.0681No
265GPR56GPR56
Entrez,  Source
G protein-coupled receptor 569622-0.0660.0602No
266FRZBFRZB
Entrez,  Source
frizzled-related protein9647-0.0670.0602No
267CD3DCD3D
Entrez,  Source
CD3d molecule, delta (CD3-TCR complex)9702-0.0680.0579No
268ACVR2AACVR2A
Entrez,  Source
activin A receptor, type IIA9778-0.0700.0540No
269JAG2JAG2
Entrez,  Source
jagged 29804-0.0710.0540No
270RETRET
Entrez,  Source
ret proto-oncogene (multiple endocrine neoplasia and medullary thyroid carcinoma 1, Hirschsprung disease)9808-0.0710.0557No
271GHRLGHRL
Entrez,  Source
ghrelin/obestatin preprohormone9852-0.0720.0543No
272SLIT1SLIT1
Entrez,  Source
slit homolog 1 (Drosophila)9915-0.0740.0516No
273HEY1HEY1
Entrez,  Source
hairy/enhancer-of-split related with YRPW motif 19928-0.0750.0527No
274GDF10GDF10
Entrez,  Source
growth differentiation factor 1010049-0.0780.0456No
275LHX3LHX3
Entrez,  Source
LIM homeobox 310087-0.0790.0448No
276LYNLYN
Entrez,  Source
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog10258-0.0830.0340No
277MMP9MMP9
Entrez,  Source
matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)10293-0.0840.0337No
278SIX1SIX1
Entrez,  Source
sine oculis homeobox homolog 1 (Drosophila)10332-0.0850.0331No
279NRP1NRP1
Entrez,  Source
neuropilin 110344-0.0860.0345No
280ERCC3ERCC3
Entrez,  Source
excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)10351-0.0860.0364No
281GLMNGLMN
Entrez,  Source
glomulin, FKBP associated protein10385-0.0870.0362No
282MEF2DMEF2D
Entrez,  Source
MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D)10414-0.0880.0364No
283BAXBAX
Entrez,  Source
BCL2-associated X protein10485-0.0900.0335No
284NCOA6NCOA6
Entrez,  Source
nuclear receptor coactivator 610541-0.0910.0317No
285NF1NF1
Entrez,  Source
neurofibromin 1 (neurofibromatosis, von Recklinghausen disease, Watson disease)10565-0.0920.0324No
286FGF16FGF16
Entrez,  Source
fibroblast growth factor 1610721-0.0980.0232No
287DLX5DLX5
Entrez,  Source
distal-less homeobox 510836-0.1020.0172No
288OSTF1OSTF1
Entrez,  Source
osteoclast stimulating factor 110866-0.1040.0177No
289COL10A1COL10A1
Entrez,  Source
collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia)10885-0.1040.0192No
290LHCGRLHCGR
Entrez,  Source
luteinizing hormone/choriogonadotropin receptor10889-0.1040.0218No
291ENGENG
Entrez,  Source
endoglin (Osler-Rendu-Weber syndrome 1)11119-0.1130.0072No
292HBEGFHBEGF
Entrez,  Source
heparin-binding EGF-like growth factor11219-0.1170.0028No
293FABP5FABP5
Entrez,  Source
fatty acid binding protein 5 (psoriasis-associated)11225-0.1170.0055No
294PLOD1PLOD1
Entrez,  Source
procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 111305-0.1210.0027No
295RPS19RPS19
Entrez,  Source
ribosomal protein S1911310-0.1210.0057No
296PRDX1PRDX1
Entrez,  Source
peroxiredoxin 111350-0.1220.0060No
297COL5A3COL5A3
Entrez,  Source
collagen, type V, alpha 311366-0.1230.0082No
298KLK7KLK7
Entrez,  Source
kallikrein 7 (chymotryptic, stratum corneum)11392-0.1240.0096No
299C1GALT1C1GALT1
Entrez,  Source
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 111515-0.1300.0037No
300TCF12TCF12
Entrez,  Source
transcription factor 12 (HTF4, helix-loop-helix transcription factors 4)11550-0.1310.0047No
301CAPN3CAPN3
Entrez,  Source
calpain 3, (p94)11560-0.1320.0075No
302GNPATGNPAT
Entrez,  Source
glyceronephosphate O-acyltransferase11617-0.1340.0068No
303STX2STX2
Entrez,  Source
syntaxin 211621-0.1350.0102No
304IL4IL4
Entrez,  Source
interleukin 411640-0.1350.0125No
305NRD1NRD1
Entrez,  Source
nardilysin (N-arginine dibasic convertase)11728-0.1400.0096No
306RASA1RASA1
Entrez,  Source
RAS p21 protein activator (GTPase activating protein) 111793-0.1440.0086No
307MSX2MSX2
Entrez,  Source
msh homeobox homolog 2 (Drosophila)11856-0.1470.0078No
308SART1SART1
Entrez,  Source
squamous cell carcinoma antigen recognised by T cells11875-0.1490.0104No
309UFD1LUFD1L
Entrez,  Source
ubiquitin fusion degradation 1 like (yeast)11964-0.1540.0078No
310MYH9MYH9
Entrez,  Source
myosin, heavy chain 9, non-muscle12058-0.1610.0050No
311ARSEARSE
Entrez,  Source
arylsulfatase E (chondrodysplasia punctata 1)12129-0.1670.0042No
312RUNX1RUNX1
Entrez,  Source
runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene)12547-0.204-0.0224No
313EGFEGF
Entrez,  Source
epidermal growth factor (beta-urogastrone)12591-0.209-0.0200No
314RNH1RNH1
Entrez,  Source
ribonuclease/angiogenin inhibitor 112694-0.224-0.0218No
315NOTCH2NOTCH2
Entrez,  Source
Notch homolog 2 (Drosophila)12747-0.232-0.0195No
316EIF2B5EIF2B5
Entrez,  Source
eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa12772-0.237-0.0150No
317CXCL10CXCL10
Entrez,  Source
chemokine (C-X-C motif) ligand 1012851-0.254-0.0141No
318NCLNCL
Entrez,  Source
nucleolin12857-0.256-0.0076No
319KLF10KLF10
Entrez,  Source
Kruppel-like factor 1013083-0.319-0.0163No
320ATPIF1ATPIF1
Entrez,  Source
ATPase inhibitory factor 113209-0.413-0.0147No
321JAK2JAK2
Entrez,  Source
Janus kinase 2 (a protein tyrosine kinase)13211-0.414-0.0036No
322LAMB3LAMB3
Entrez,  Source
laminin, beta 313259-0.5040.0064No
Table: GSEA details [plain text format]



Fig 2: ORGAN_DEVELOPMENT   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ORGAN_DEVELOPMENT: Random ES distribution   
Gene set null distribution of ES for ORGAN_DEVELOPMENT