Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | PATTERN_BINDING |
| Enrichment Score (ES) | 0.6824305 |
| Normalized Enrichment Score (NES) | 1.8062505 |
| Nominal p-value | 0.0059288535 |
| FDR q-value | 0.027324269 |
| FWER p-Value | 0.926 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | PGLYRP1 | PGLYRP1 Entrez, Source | peptidoglycan recognition protein 1 | 9 | 1.343 | 0.2770 | Yes |
| 2 | LPL | LPL Entrez, Source | lipoprotein lipase | 107 | 0.646 | 0.4033 | Yes |
| 3 | TNFAIP6 | TNFAIP6 Entrez, Source | tumor necrosis factor, alpha-induced protein 6 | 159 | 0.550 | 0.5133 | Yes |
| 4 | FSTL1 | FSTL1 Entrez, Source | follistatin-like 1 | 246 | 0.444 | 0.5985 | Yes |
| 5 | PF4 | PF4 Entrez, Source | platelet factor 4 (chemokine (C-X-C motif) ligand 4) | 364 | 0.357 | 0.6635 | Yes |
| 6 | SERPINA5 | SERPINA5 Entrez, Source | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 | 876 | 0.199 | 0.6662 | Yes |
| 7 | FGFBP1 | FGFBP1 Entrez, Source | fibroblast growth factor binding protein 1 | 1178 | 0.163 | 0.6773 | Yes |
| 8 | APOA5 | APOA5 Entrez, Source | apolipoprotein A-V | 1486 | 0.136 | 0.6824 | Yes |
| 9 | TGFBR3 | TGFBR3 Entrez, Source | transforming growth factor, beta receptor III (betaglycan, 300kDa) | 1932 | 0.110 | 0.6718 | No |
| 10 | FGF10 | FGF10 Entrez, Source | fibroblast growth factor 10 | 2765 | 0.078 | 0.6255 | No |
| 11 | TLR2 | TLR2 Entrez, Source | toll-like receptor 2 | 3136 | 0.068 | 0.6117 | No |
| 12 | CHIA | CHIA Entrez, Source | chitinase, acidic | 3265 | 0.064 | 0.6152 | No |
| 13 | THBS2 | THBS2 Entrez, Source | thrombospondin 2 | 4738 | 0.029 | 0.5108 | No |
| 14 | LRPAP1 | LRPAP1 Entrez, Source | low density lipoprotein receptor-related protein associated protein 1 | 5727 | 0.010 | 0.4388 | No |
| 15 | STAB2 | STAB2 Entrez, Source | stabilin 2 | 7180 | -0.015 | 0.3330 | No |
| 16 | THBS4 | THBS4 Entrez, Source | thrombospondin 4 | 7541 | -0.022 | 0.3106 | No |
| 17 | MDK | MDK Entrez, Source | midkine (neurite growth-promoting factor 2) | 8318 | -0.038 | 0.2601 | No |
| 18 | RPL29 | RPL29 Entrez, Source | ribosomal protein L29 | 8874 | -0.049 | 0.2287 | No |
| 19 | IMPG2 | IMPG2 Entrez, Source | interphotoreceptor matrix proteoglycan 2 | 9065 | -0.053 | 0.2254 | No |
| 20 | HBEGF | HBEGF Entrez, Source | heparin-binding EGF-like growth factor | 11219 | -0.117 | 0.0879 | No |
| 21 | HDGF | HDGF Entrez, Source | hepatoma-derived growth factor (high-mobility group protein 1-like) | 11910 | -0.150 | 0.0672 | No |
| 22 | CD14 | CD14 Entrez, Source | CD14 molecule | 12462 | -0.194 | 0.0661 | No |
