Details for gene set PROTEINACEOUS_EXTRACELLULAR

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in class	double_gel_8d
GeneSet	PROTEINACEOUS_EXTRACELLULAR_MATRIX
Enrichment Score (ES)	0.61627996
Normalized Enrichment Score (NES)	2.0003223
Nominal p-value	0.0
FDR q-value	0.005571248
FWER p-Value	0.15

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL1A2	COL1A2 Entrez, Source	collagen, type I, alpha 2	12	1.254	0.1397	Yes
2	CTGF	CTGF Entrez, Source	connective tissue growth factor	37	0.888	0.2375	Yes
3	COL3A1	COL3A1 Entrez, Source	collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)	43	0.843	0.3316	Yes
4	COL5A2	COL5A2 Entrez, Source	collagen, type V, alpha 2	61	0.759	0.4155	Yes
5	MGP	MGP Entrez, Source	matrix Gla protein	108	0.644	0.4843	Yes
6	PRELP	PRELP Entrez, Source	proline/arginine-rich end leucine-rich repeat protein	229	0.459	0.5267	Yes
7	LAMC1	LAMC1 Entrez, Source	laminin, gamma 1 (formerly LAMB2)	530	0.275	0.5350	Yes
8	LAMB2	LAMB2 Entrez, Source	laminin, beta 2 (laminin S)	590	0.260	0.5596	Yes
9	EFEMP2	EFEMP2 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 2	852	0.204	0.5629	Yes
10	USH2A	USH2A Entrez, Source	Usher syndrome 2A (autosomal recessive, mild)	918	0.192	0.5796	Yes
11	FBN1	FBN1 Entrez, Source	fibrillin 1	968	0.187	0.5968	Yes
12	COL18A1	COL18A1 Entrez, Source	collagen, type XVIII, alpha 1	1103	0.170	0.6059	Yes
13	LTBP4	LTBP4 Entrez, Source	latent transforming growth factor beta binding protein 4	1296	0.151	0.6083	Yes
14	ADAMTS5	ADAMTS5 Entrez, Source	ADAM metallopeptidase with thrombospondin type 1 motif, 5 (aggrecanase-2)	1522	0.133	0.6063	Yes
15	IMPG1	IMPG1 Entrez, Source	interphotoreceptor matrix proteoglycan 1	1740	0.120	0.6034	Yes
16	SPG7	SPG7 Entrez, Source	spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)	1845	0.115	0.6085	Yes
17	TGFB1	TGFB1 Entrez, Source	transforming growth factor, beta 1 (Camurati-Engelmann disease)	2076	0.105	0.6029	Yes
18	DSPP	DSPP Entrez, Source	dentin sialophosphoprotein	2163	0.101	0.6077	Yes
19	SGCE	SGCE Entrez, Source	sarcoglycan, epsilon	2274	0.096	0.6103	Yes
20	SGCG	SGCG Entrez, Source	sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)	2335	0.094	0.6163	Yes
21	COLQ	COLQ Entrez, Source	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	2670	0.081	0.6002	No
22	ECM1	ECM1 Entrez, Source	extracellular matrix protein 1	2718	0.080	0.6056	No
23	MEPE	MEPE Entrez, Source	matrix, extracellular phosphoglycoprotein with ASARM motif (bone)	2775	0.078	0.6101	No
24	COL11A1	COL11A1 Entrez, Source	collagen, type XI, alpha 1	2981	0.072	0.6027	No
25	COL5A1	COL5A1 Entrez, Source	collagen, type V, alpha 1	3222	0.065	0.5919	No
26	COL4A4	COL4A4 Entrez, Source	collagen, type IV, alpha 4	3320	0.062	0.5916	No
27	LTBP2	LTBP2 Entrez, Source	latent transforming growth factor beta binding protein 2	3324	0.062	0.5983	No
28	LAMA3	LAMA3 Entrez, Source	laminin, alpha 3	3344	0.061	0.6038	No
29	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	3378	0.061	0.6081	No
30	MMP11	MMP11 Entrez, Source	matrix metallopeptidase 11 (stromelysin 3)	3445	0.059	0.6098	No
31	CHI3L1	CHI3L1 Entrez, Source	chitinase 3-like 1 (cartilage glycoprotein-39)	3449	0.059	0.6162	No
32	TFPI2	TFPI2 Entrez, Source	tissue factor pathway inhibitor 2	3591	0.055	0.6118	No
33	MATN1	MATN1 Entrez, Source	matrilin 1, cartilage matrix protein	3617	0.054	0.6160	No
34	TINAG	TINAG Entrez, Source	tubulointerstitial nephritis antigen	3770	0.051	0.6102	No
35	NID2	NID2 Entrez, Source	nidogen 2 (osteonidogen)	4025	0.044	0.5960	No
36	FBLN2	FBLN2 Entrez, Source	fibulin 2	4117	0.042	0.5939	No
37	MMP10	MMP10 Entrez, Source	matrix metallopeptidase 10 (stromelysin 2)	4938	0.025	0.5350	No
38	CAV3	CAV3 Entrez, Source	caveolin 3	4995	0.024	0.5335	No
39	COL16A1	COL16A1 Entrez, Source	collagen, type XVI, alpha 1	5388	0.017	0.5059	No
40	DMP1	DMP1 Entrez, Source	dentin matrix acidic phosphoprotein	5545	0.014	0.4957	No
41	COL9A1	COL9A1 Entrez, Source	collagen, type IX, alpha 1	6131	0.003	0.4520	No
42	MUC5AC	MUC5AC Entrez, Source	mucin 5AC, oligomeric mucus/gel-forming	6248	0.001	0.4433	No
43	FMOD	FMOD Entrez, Source	fibromodulin	6665	-0.007	0.4127	No
44	COL15A1	COL15A1 Entrez, Source	collagen, type XV, alpha 1	6979	-0.012	0.3905	No
45	THBS4	THBS4 Entrez, Source	thrombospondin 4	7541	-0.022	0.3508	No
46	CHAD	CHAD Entrez, Source	chondroadherin	7677	-0.025	0.3434	No
47	FBLN5	FBLN5 Entrez, Source	fibulin 5	8504	-0.042	0.2859	No
48	HAPLN1	HAPLN1 Entrez, Source	hyaluronan and proteoglycan link protein 1	8916	-0.050	0.2606	No
49	LUM	LUM Entrez, Source	lumican	8919	-0.050	0.2661	No
50	IMPG2	IMPG2 Entrez, Source	interphotoreceptor matrix proteoglycan 2	9065	-0.053	0.2612	No
51	COMP	COMP Entrez, Source	cartilage oligomeric matrix protein	9154	-0.055	0.2607	No
52	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	9896	-0.074	0.2132	No
53	FBN2	FBN2 Entrez, Source	fibrillin 2 (congenital contractural arachnodactyly)	10457	-0.089	0.1810	No
54	SMC3	SMC3 Entrez, Source	structural maintenance of chromosomes 3	10571	-0.092	0.1829	No
55	COL10A1	COL10A1 Entrez, Source	collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia)	10885	-0.104	0.1710	No
56	COL5A3	COL5A3 Entrez, Source	collagen, type V, alpha 3	11366	-0.123	0.1487	No