Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | RORIE_ES_PNET_UP |
| Enrichment Score (ES) | 0.74016166 |
| Normalized Enrichment Score (NES) | 1.8562474 |
| Nominal p-value | 0.009505703 |
| FDR q-value | 0.017761275 |
| FWER p-Value | 0.74 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | ANXA1 | ANXA1 Entrez, Source | annexin A1 | 25 | 0.995 | 0.2071 | Yes |
| 2 | DAB2 | DAB2 Entrez, Source | disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila) | 32 | 0.925 | 0.4010 | Yes |
| 3 | CTGF | CTGF Entrez, Source | connective tissue growth factor | 37 | 0.888 | 0.5872 | Yes |
| 4 | GPC4 | GPC4 Entrez, Source | glypican 4 | 577 | 0.262 | 0.6018 | Yes |
| 5 | EMP3 | EMP3 Entrez, Source | epithelial membrane protein 3 | 662 | 0.243 | 0.6466 | Yes |
| 6 | SEPP1 | SEPP1 Entrez, Source | selenoprotein P, plasma, 1 | 823 | 0.209 | 0.6785 | Yes |
| 7 | PAWR | PAWR Entrez, Source | PRKC, apoptosis, WT1, regulator | 899 | 0.196 | 0.7140 | Yes |
| 8 | PITX2 | PITX2 Entrez, Source | paired-like homeodomain transcription factor 2 | 1047 | 0.177 | 0.7402 | Yes |
| 9 | ME1 | ME1 Entrez, Source | malic enzyme 1, NADP(+)-dependent, cytosolic | 1647 | 0.125 | 0.7216 | No |
| 10 | CTH | CTH Entrez, Source | cystathionase (cystathionine gamma-lyase) | 2088 | 0.104 | 0.7104 | No |
| 11 | RBP1 | RBP1 Entrez, Source | retinol binding protein 1, cellular | 2591 | 0.084 | 0.6903 | No |
| 12 | NID1 | NID1 Entrez, Source | nidogen 1 | 4891 | 0.026 | 0.5233 | No |
| 13 | POU4F1 | POU4F1 Entrez, Source | POU domain, class 4, transcription factor 1 | 6349 | -0.001 | 0.4142 | No |
| 14 | HTRA1 | HTRA1 Entrez, Source | HtrA serine peptidase 1 | 9698 | -0.068 | 0.1772 | No |
| 15 | MYC | MYC Entrez, Source | v-myc myelocytomatosis viral oncogene homolog (avian) | 12249 | -0.175 | 0.0227 | No |
| 16 | GADD45B | GADD45B Entrez, Source | growth arrest and DNA-damage-inducible, beta | 12969 | -0.282 | 0.0280 | No |
