Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_24h.class.cls
#double_gel_8d_versus_double_gel_24h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in classdouble_gel_8d
GeneSetSMOOTH_MUSCLE_CONTRACTION
Enrichment Score (ES)0.57906765
Normalized Enrichment Score (NES)2.126217
Nominal p-value0.0
FDR q-value0.0010515748
FWER p-Value0.011
Table: GSEA Results Summary



Fig 1: Enrichment plot: SMOOTH_MUSCLE_CONTRACTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FOSFOS
Entrez,  Source
v-fos FBJ murine osteosarcoma viral oncogene homolog31.6220.0994Yes
2RGS2RGS2
Entrez,  Source
regulator of G-protein signalling 2, 24kDa500.8100.1456Yes
3ACTA1ACTA1
Entrez,  Source
actin, alpha 1, skeletal muscle600.7620.1917Yes
4RGS1RGS1
Entrez,  Source
regulator of G-protein signalling 1730.7150.2346Yes
5RGS5RGS5
Entrez,  Source
regulator of G-protein signalling 51250.6160.2686Yes
6RAMP1RAMP1
Entrez,  Source
receptor (calcitonin) activity modifying protein 11360.5940.3043Yes
7GRK5GRK5
Entrez,  Source
G protein-coupled receptor kinase 51880.5070.3316Yes
8RGS16RGS16
Entrez,  Source
regulator of G-protein signalling 162050.4820.3600Yes
9PRKAR2BPRKAR2B
Entrez,  Source
protein kinase, cAMP-dependent, regulatory, type II, beta2140.4740.3885Yes
10RGS10RGS10
Entrez,  Source
regulator of G-protein signalling 102470.4430.4132Yes
11ITPR1ITPR1
Entrez,  Source
inositol 1,4,5-triphosphate receptor, type 12820.4130.4360Yes
12RGS3RGS3
Entrez,  Source
regulator of G-protein signalling 33010.4020.4593Yes
13GJA1GJA1
Entrez,  Source
gap junction protein, alpha 1, 43kDa (connexin 43)3160.3870.4820Yes
14RAMP3RAMP3
Entrez,  Source
receptor (calcitonin) activity modifying protein 35180.2800.4840Yes
15IGFBP3IGFBP3
Entrez,  Source
insulin-like growth factor binding protein 35330.2740.4997Yes
16PKIAPKIA
Entrez,  Source
protein kinase (cAMP-dependent, catalytic) inhibitor alpha5880.2600.5116Yes
17PKIBPKIB
Entrez,  Source
protein kinase (cAMP-dependent, catalytic) inhibitor beta5920.2580.5272Yes
18IGFBP1IGFBP1
Entrez,  Source
insulin-like growth factor binding protein 15960.2580.5428Yes
19RGS4RGS4
Entrez,  Source
regulator of G-protein signalling 46390.2470.5548Yes
20PRKAR1BPRKAR1B
Entrez,  Source
protein kinase, cAMP-dependent, regulatory, type I, beta11170.1690.5291Yes
21PKIGPKIG
Entrez,  Source
protein kinase (cAMP-dependent, catalytic) inhibitor gamma11210.1690.5392Yes
22EDG2EDG2
Entrez,  Source
endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 213990.1430.5270Yes
23PRKCAPRKCA
Entrez,  Source
protein kinase C, alpha14230.1410.5339Yes
24YWHAQYWHAQ
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide14470.1390.5407Yes
25ADCY5ADCY5
Entrez,  Source
adenylate cyclase 515410.1320.5418Yes
26IGFBP2IGFBP2
Entrez,  Source
insulin-like growth factor binding protein 2, 36kDa15560.1310.5488Yes
27ADMRADMR
Entrez,  Source
adrenomedullin receptor15610.1310.5565Yes
28ADCY6ADCY6
Entrez,  Source
adenylate cyclase 616490.1250.5576Yes
29GNAQGNAQ
Entrez,  Source
guanine nucleotide binding protein (G protein), q polypeptide17220.1220.5596Yes
30ATP2A3ATP2A3
Entrez,  Source
ATPase, Ca++ transporting, ubiquitous18370.1150.5581Yes
31PLCD1PLCD1
Entrez,  Source
phospholipase C, delta 118670.1130.5628Yes
32CALM3CALM3
Entrez,  Source
calmodulin 3 (phosphorylase kinase, delta)19830.1090.5608Yes
33GUCA2BGUCA2B
Entrez,  Source
guanylate cyclase activator 2B (uroguanylin)20130.1070.5652Yes
34PLCG2PLCG2
Entrez,  Source
phospholipase C, gamma 2 (phosphatidylinositol-specific)20300.1060.5705Yes
35ATF3ATF3
Entrez,  Source
activating transcription factor 320350.1060.5767Yes
36CRHCRH
Entrez,  Source
corticotropin releasing hormone21850.1000.5716Yes
37ARRB1ARRB1
Entrez,  Source
arrestin, beta 122280.0980.5744Yes
38RGS7RGS7
Entrez,  Source
regulator of G-protein signalling 722710.0970.5772Yes
39GNB5GNB5
Entrez,  Source
guanine nucleotide binding protein (G protein), beta 524620.0890.5683Yes
40PRKCHPRKCH
Entrez,  Source
protein kinase C, eta25450.0860.5673Yes
41ITPR3ITPR3
Entrez,  Source
inositol 1,4,5-triphosphate receptor, type 325610.0850.5714Yes
42ATF5ATF5
Entrez,  Source
activating transcription factor 525780.0840.5754Yes
43IGFBP6IGFBP6
Entrez,  Source
insulin-like growth factor binding protein 625980.0840.5791Yes
44OXTOXT
Entrez,  Source
oxytocin, prepro- (neurophysin I)27500.0790.5725No
45GUCY1A3GUCY1A3
Entrez,  Source
guanylate cyclase 1, soluble, alpha 328160.0770.5723No
46GNB3GNB3
Entrez,  Source
guanine nucleotide binding protein (G protein), beta polypeptide 328460.0760.5747No
47NOS3NOS3
Entrez,  Source
nitric oxide synthase 3 (endothelial cell)29510.0720.5713No
48GNG3GNG3
Entrez,  Source
guanine nucleotide binding protein (G protein), gamma 329780.0720.5737No
49GNB4GNB4
Entrez,  Source
guanine nucleotide binding protein (G protein), beta polypeptide 430310.0700.5741No
50PRKAR2APRKAR2A
Entrez,  Source
protein kinase, cAMP-dependent, regulatory, type II, alpha30770.0690.5749No
51RLN1RLN1
Entrez,  Source
relaxin 131260.0680.5755No
52CORINCORIN
Entrez,  Source
corin, serine peptidase32740.0630.5683No
53RGS6RGS6
Entrez,  Source
regulator of G-protein signalling 633680.0610.5650No
54SLC8A1SLC8A1
Entrez,  Source
solute carrier family 8 (sodium/calcium exchanger), member 134840.0580.5598No
55PRKCZPRKCZ
Entrez,  Source
protein kinase C, zeta38700.0480.5337No
56CACNB3CACNB3
Entrez,  Source
calcium channel, voltage-dependent, beta 3 subunit39040.0470.5341No
57ARRB2ARRB2
Entrez,  Source
arrestin, beta 239760.0450.5315No
58ADCY2ADCY2
Entrez,  Source
adenylate cyclase 2 (brain)41580.0410.5203No
59GNG7GNG7
Entrez,  Source
guanine nucleotide binding protein (G protein), gamma 741660.0410.5223No
60CRHR1CRHR1
Entrez,  Source
corticotropin releasing hormone receptor 141730.0400.5243No
61CAMK2ACAMK2A
Entrez,  Source
calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha43030.0370.5168No
62CREB3CREB3
Entrez,  Source
cAMP responsive element binding protein 343200.0370.5179No
63GBA2GBA2
Entrez,  Source
glucosidase, beta (bile acid) 244890.0340.5073No
64IGFBP4IGFBP4
Entrez,  Source
insulin-like growth factor binding protein 445780.0320.5026No
65DGKZDGKZ
Entrez,  Source
diacylglycerol kinase, zeta 104kDa45890.0320.5038No
66RYR1RYR1
Entrez,  Source
ryanodine receptor 1 (skeletal)46950.0300.4977No
67CREBL1CREBL1
Entrez,  Source
cAMP responsive element binding protein-like 147170.0300.4980No
68ITPR2ITPR2
Entrez,  Source
inositol 1,4,5-triphosphate receptor, type 247330.0300.4987No
69PRKAR1APRKAR1A
Entrez,  Source
protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)47500.0290.4992No
70NFKB1NFKB1
Entrez,  Source
nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (p105)47780.0280.4989No
71RAMP2RAMP2
Entrez,  Source
receptor (calcitonin) activity modifying protein 248260.0270.4971No
72ACTA2ACTA2
Entrez,  Source
actin, alpha 2, smooth muscle, aorta48270.0270.4987No
73RGS19RGS19
Entrez,  Source
regulator of G-protein signalling 1952410.0200.4687No
74NOS1NOS1
Entrez,  Source
nitric oxide synthase 1 (neuronal)52820.0190.4669No
75IL6IL6
Entrez,  Source
interleukin 6 (interferon, beta 2)52850.0190.4679No
76PLCB3PLCB3
Entrez,  Source
phospholipase C, beta 3 (phosphatidylinositol-specific)56750.0110.4392No
77GNB2GNB2
Entrez,  Source
guanine nucleotide binding protein (G protein), beta polypeptide 258010.0090.4303No
78RGS9RGS9
Entrez,  Source
regulator of G-protein signalling 958730.0080.4254No
79PDE4DPDE4D
Entrez,  Source
phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila)58900.0070.4246No
80OXTROXTR
Entrez,  Source
oxytocin receptor59400.0060.4213No
81CAMK2DCAMK2D
Entrez,  Source
calcium/calmodulin-dependent protein kinase (CaM kinase) II delta59750.0060.4191No
82GRK4GRK4
Entrez,  Source
G protein-coupled receptor kinase 459840.0050.4188No
83GRK6GRK6
Entrez,  Source
G protein-coupled receptor kinase 660120.0050.4171No
84PRKACAPRKACA
Entrez,  Source
protein kinase, cAMP-dependent, catalytic, alpha60170.0050.4170No
85YWHABYWHAB
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide60580.0040.4143No
86ATF4ATF4
Entrez,  Source
activating transcription factor 4 (tax-responsive enhancer element B67)6295-0.0000.3964No
87MYLK2MYLK2
Entrez,  Source
myosin light chain kinase 2, skeletal muscle6310-0.0000.3954No
88JUNJUN
Entrez,  Source
jun oncogene6649-0.0060.3702No
89CALM2CALM2
Entrez,  Source
calmodulin 2 (phosphorylase kinase, delta)6851-0.0100.3556No
90CNN1CNN1
Entrez,  Source
calponin 1, basic, smooth muscle7011-0.0120.3443No
91CALCACALCA
Entrez,  Source
calcitonin/calcitonin-related polypeptide, alpha7138-0.0140.3357No
92PDE4BPDE4B
Entrez,  Source
phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila)7179-0.0150.3336No
93GNG5GNG5
Entrez,  Source
guanine nucleotide binding protein (G protein), gamma 57340-0.0180.3227No
94YWHAHYWHAH
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide7564-0.0230.3072No
95CAMK2GCAMK2G
Entrez,  Source
calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma7620-0.0240.3045No
96RCP9RCP9
Entrez,  Source
-7655-0.0250.3035No
97PRKCDPRKCD
Entrez,  Source
protein kinase C, delta7739-0.0260.2988No
98MYL2MYL2
Entrez,  Source
myosin, light chain 2, regulatory, cardiac, slow7811-0.0280.2951No
99PRKCQPRKCQ
Entrez,  Source
protein kinase C, theta7952-0.0300.2864No
100RGS14RGS14
Entrez,  Source
regulator of G-protein signalling 148231-0.0360.2676No
101RYR2RYR2
Entrez,  Source
ryanodine receptor 2 (cardiac)8394-0.0390.2577No
102CAMK2BCAMK2B
Entrez,  Source
calcium/calmodulin-dependent protein kinase (CaM kinase) II beta8471-0.0410.2545No
103ADCY3ADCY3
Entrez,  Source
adenylate cyclase 38509-0.0420.2542No
104ATP2A2ATP2A2
Entrez,  Source
ATPase, Ca++ transporting, cardiac muscle, slow twitch 28616-0.0440.2489No
105PLCG1PLCG1
Entrez,  Source
phospholipase C, gamma 18918-0.0500.2292No
106GNG12GNG12
Entrez,  Source
guanine nucleotide binding protein (G protein), gamma 129591-0.0650.1824No
107IL1BIL1B
Entrez,  Source
interleukin 1, beta9721-0.0690.1769No
108ADCY8ADCY8
Entrez,  Source
adenylate cyclase 8 (brain)9950-0.0750.1642No
109SP1SP1
Entrez,  Source
Sp1 transcription factor10287-0.0840.1440No
110ATF1ATF1
Entrez,  Source
activating transcription factor 110381-0.0870.1423No
111PRKCEPRKCE
Entrez,  Source
protein kinase C, epsilon10468-0.0890.1412No
112ADCY4ADCY4
Entrez,  Source
adenylate cyclase 410641-0.0950.1341No
113CALM1CALM1
Entrez,  Source
calmodulin 1 (phosphorylase kinase, delta)10674-0.0960.1376No
114ADMADM
Entrez,  Source
adrenomedullin11063-0.1100.1150No
115GUCA2AGUCA2A
Entrez,  Source
guanylate cyclase activator 2A (guanylin)11148-0.1140.1156No
116PRKD1PRKD1
Entrez,  Source
protein kinase D111159-0.1150.1219No
117PRKCB1PRKCB1
Entrez,  Source
protein kinase C, beta 111650-0.1360.0932No
118GNB1GNB1
Entrez,  Source
guanine nucleotide binding protein (G protein), beta polypeptide 111879-0.1490.0851No
119GSTO1GSTO1
Entrez,  Source
glutathione S-transferase omega 112484-0.1970.0515No
120ATF2ATF2
Entrez,  Source
activating transcription factor 212642-0.2160.0529No
Table: GSEA details [plain text format]



Fig 2: SMOOTH_MUSCLE_CONTRACTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: SMOOTH_MUSCLE_CONTRACTION: Random ES distribution   
Gene set null distribution of ES for SMOOTH_MUSCLE_CONTRACTION