Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | STRIATED_MUSCLE_CONTRACTION |
| Enrichment Score (ES) | 0.6439929 |
| Normalized Enrichment Score (NES) | 1.784172 |
| Nominal p-value | 0.0076481835 |
| FDR q-value | 0.0316503 |
| FWER p-Value | 0.97 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | VIM | VIM Entrez, Source | vimentin | 7 | 1.391 | 0.4140 | Yes |
| 2 | ACTA1 | ACTA1 Entrez, Source | actin, alpha 1, skeletal muscle | 60 | 0.762 | 0.6372 | Yes |
| 3 | TNNT1 | TNNT1 Entrez, Source | troponin T type 1 (skeletal, slow) | 1017 | 0.180 | 0.6192 | Yes |
| 4 | ACTN3 | ACTN3 Entrez, Source | actinin, alpha 3 | 1290 | 0.152 | 0.6440 | Yes |
| 5 | TMOD1 | TMOD1 Entrez, Source | tropomodulin 1 | 2135 | 0.102 | 0.6111 | No |
| 6 | TPM4 | TPM4 Entrez, Source | tropomyosin 4 | 2293 | 0.096 | 0.6278 | No |
| 7 | MYH6 /// MYH7 | 2869 | 0.075 | 0.6071 | No | ||
| 8 | DES | DES Entrez, Source | desmin | 3260 | 0.064 | 0.5968 | No |
| 9 | MYL3 | MYL3 Entrez, Source | myosin, light chain 3, alkali; ventricular, skeletal, slow | 4081 | 0.043 | 0.5479 | No |
| 10 | MYH3 | MYH3 Entrez, Source | myosin, heavy chain 3, skeletal muscle, embryonic | 4122 | 0.042 | 0.5574 | No |
| 11 | ACTA2 | ACTA2 Entrez, Source | actin, alpha 2, smooth muscle, aorta | 4827 | 0.027 | 0.5127 | No |
| 12 | MYOM1 | MYOM1 Entrez, Source | myomesin 1 (skelemin) 185kDa | 5025 | 0.024 | 0.5049 | No |
| 13 | MYH8 | MYH8 Entrez, Source | myosin, heavy chain 8, skeletal muscle, perinatal | 5127 | 0.022 | 0.5038 | No |
| 14 | TPM1 | TPM1 Entrez, Source | tropomyosin 1 (alpha) | 6293 | -0.000 | 0.4163 | No |
| 15 | TNNI1 | TNNI1 Entrez, Source | troponin I type 1 (skeletal, slow) | 6476 | -0.003 | 0.4036 | No |
| 16 | MYH6 | MYH6 Entrez, Source | myosin, heavy chain 6, cardiac muscle, alpha (cardiomyopathy, hypertrophic 1) | 6716 | -0.007 | 0.3879 | No |
| 17 | TNNT3 | TNNT3 Entrez, Source | troponin T type 3 (skeletal, fast) | 7488 | -0.021 | 0.3364 | No |
| 18 | MYBPC1 | MYBPC1 Entrez, Source | myosin binding protein C, slow type | 7507 | -0.022 | 0.3415 | No |
| 19 | TNNI3 | TNNI3 Entrez, Source | troponin I type 3 (cardiac) | 7549 | -0.023 | 0.3451 | No |
| 20 | TNNT2 | TNNT2 Entrez, Source | troponin T type 2 (cardiac) | 7810 | -0.028 | 0.3338 | No |
| 21 | MYL2 | MYL2 Entrez, Source | myosin, light chain 2, regulatory, cardiac, slow | 7811 | -0.028 | 0.3420 | No |
| 22 | TTN | TTN Entrez, Source | titin | 8210 | -0.035 | 0.3227 | No |
| 23 | ACTN4 | ACTN4 Entrez, Source | actinin, alpha 4 | 9335 | -0.059 | 0.2559 | No |
| 24 | DMD | DMD Entrez, Source | dystrophin (muscular dystrophy, Duchenne and Becker types) | 9896 | -0.074 | 0.2358 | No |
| 25 | TNNI2 | TNNI2 Entrez, Source | troponin I type 2 (skeletal, fast) | 10004 | -0.077 | 0.2506 | No |
