Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | TPA_SENS_MIDDLE_UP |
| Enrichment Score (ES) | 0.56542444 |
| Normalized Enrichment Score (NES) | 1.7989206 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.028783705 |
| FWER p-Value | 0.94 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | VIM | VIM Entrez, Source | vimentin | 7 | 1.391 | 0.1742 | Yes |
| 2 | PRKAR2B | PRKAR2B Entrez, Source | protein kinase, cAMP-dependent, regulatory, type II, beta | 214 | 0.474 | 0.2183 | Yes |
| 3 | CYBA | CYBA Entrez, Source | cytochrome b-245, alpha polypeptide | 264 | 0.427 | 0.2683 | Yes |
| 4 | EGR2 | EGR2 Entrez, Source | early growth response 2 (Krox-20 homolog, Drosophila) | 312 | 0.390 | 0.3137 | Yes |
| 5 | SPRY2 | SPRY2 Entrez, Source | sprouty homolog 2 (Drosophila) | 314 | 0.388 | 0.3624 | Yes |
| 6 | CCL2 | CCL2 Entrez, Source | chemokine (C-C motif) ligand 2 | 405 | 0.336 | 0.3978 | Yes |
| 7 | S100A11 | S100A11 Entrez, Source | S100 calcium binding protein A11 | 562 | 0.267 | 0.4196 | Yes |
| 8 | NFKBIA | NFKBIA Entrez, Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha | 565 | 0.265 | 0.4527 | Yes |
| 9 | EMP3 | EMP3 Entrez, Source | epithelial membrane protein 3 | 662 | 0.243 | 0.4760 | Yes |
| 10 | ALOX5AP | ALOX5AP Entrez, Source | arachidonate 5-lipoxygenase-activating protein | 740 | 0.229 | 0.4989 | Yes |
| 11 | IL2RG | IL2RG Entrez, Source | interleukin 2 receptor, gamma (severe combined immunodeficiency) | 879 | 0.198 | 0.5134 | Yes |
| 12 | TGFB2 | TGFB2 Entrez, Source | transforming growth factor, beta 2 | 916 | 0.193 | 0.5350 | Yes |
| 13 | IL1RAP | IL1RAP Entrez, Source | interleukin 1 receptor accessory protein | 1043 | 0.177 | 0.5478 | Yes |
| 14 | ANXA5 | ANXA5 Entrez, Source | annexin A5 | 1367 | 0.146 | 0.5417 | Yes |
| 15 | PLD3 | PLD3 Entrez, Source | phospholipase D family, member 3 | 1469 | 0.137 | 0.5514 | Yes |
| 16 | CCL3 | CCL3 Entrez, Source | chemokine (C-C motif) ligand 3 | 1508 | 0.134 | 0.5654 | Yes |
| 17 | AQP4 | AQP4 Entrez, Source | aquaporin 4 | 1853 | 0.114 | 0.5539 | No |
| 18 | NR0B2 | NR0B2 Entrez, Source | nuclear receptor subfamily 0, group B, member 2 | 2330 | 0.094 | 0.5299 | No |
| 19 | DUSP6 | DUSP6 Entrez, Source | dual specificity phosphatase 6 | 2490 | 0.088 | 0.5290 | No |
| 20 | AGER | AGER Entrez, Source | advanced glycosylation end product-specific receptor | 3800 | 0.050 | 0.4369 | No |
| 21 | AGA | AGA Entrez, Source | aspartylglucosaminidase | 3869 | 0.048 | 0.4378 | No |
| 22 | PREP | PREP Entrez, Source | prolyl endopeptidase | 4218 | 0.039 | 0.4166 | No |
| 23 | CCL7 | CCL7 Entrez, Source | chemokine (C-C motif) ligand 7 | 4409 | 0.036 | 0.4067 | No |
| 24 | C3AR1 | C3AR1 Entrez, Source | complement component 3a receptor 1 | 4875 | 0.027 | 0.3751 | No |
| 25 | RPS6KA1 | RPS6KA1 Entrez, Source | ribosomal protein S6 kinase, 90kDa, polypeptide 1 | 5059 | 0.023 | 0.3642 | No |
| 26 | KCNN3 | KCNN3 Entrez, Source | potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 | 6198 | 0.001 | 0.2788 | No |
| 27 | DPP4 | DPP4 Entrez, Source | dipeptidyl-peptidase 4 (CD26, adenosine deaminase complexing protein 2) | 6342 | -0.001 | 0.2681 | No |
| 28 | RAC2 | RAC2 Entrez, Source | ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) | 6381 | -0.001 | 0.2654 | No |
| 29 | DYNLL1 | DYNLL1 Entrez, Source | dynein, light chain, LC8-type 1 | 6888 | -0.010 | 0.2287 | No |
| 30 | CAP1 | CAP1 Entrez, Source | CAP, adenylate cyclase-associated protein 1 (yeast) | 7565 | -0.023 | 0.1807 | No |
| 31 | INHBA | INHBA Entrez, Source | inhibin, beta A (activin A, activin AB alpha polypeptide) | 7768 | -0.027 | 0.1689 | No |
| 32 | CLK3 | CLK3 Entrez, Source | CDC-like kinase 3 | 7918 | -0.030 | 0.1614 | No |
| 33 | CDC37 | CDC37 Entrez, Source | CDC37 cell division cycle 37 homolog (S. cerevisiae) | 8848 | -0.049 | 0.0976 | No |
| 34 | PIK3CB | PIK3CB Entrez, Source | phosphoinositide-3-kinase, catalytic, beta polypeptide | 9345 | -0.059 | 0.0678 | No |
| 35 | HSPA8 | HSPA8 Entrez, Source | heat shock 70kDa protein 8 | 9449 | -0.062 | 0.0678 | No |
| 36 | DUSP2 | DUSP2 Entrez, Source | dual specificity phosphatase 2 | 9991 | -0.076 | 0.0367 | No |
| 37 | ALAS1 | ALAS1 Entrez, Source | aminolevulinate, delta-, synthase 1 | 9995 | -0.076 | 0.0460 | No |
| 38 | RHOH | RHOH Entrez, Source | ras homolog gene family, member H | 10420 | -0.088 | 0.0252 | No |
| 39 | SNRPB | SNRPB Entrez, Source | small nuclear ribonucleoprotein polypeptides B and B1 | 11009 | -0.109 | -0.0054 | No |
| 40 | HBEGF | HBEGF Entrez, Source | heparin-binding EGF-like growth factor | 11219 | -0.117 | -0.0064 | No |
| 41 | CCT5 | CCT5 Entrez, Source | chaperonin containing TCP1, subunit 5 (epsilon) | 11511 | -0.130 | -0.0121 | No |
| 42 | IL1RN | IL1RN Entrez, Source | interleukin 1 receptor antagonist | 11709 | -0.139 | -0.0095 | No |
| 43 | TSC22D1 | TSC22D1 Entrez, Source | TSC22 domain family, member 1 | 11757 | -0.142 | 0.0048 | No |
| 44 | PLAUR | PLAUR Entrez, Source | plasminogen activator, urokinase receptor | 11843 | -0.147 | 0.0169 | No |
| 45 | TAPBP | TAPBP Entrez, Source | TAP binding protein (tapasin) | 12132 | -0.167 | 0.0162 | No |
| 46 | SERPINE1 | SERPINE1 Entrez, Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 12951 | -0.277 | -0.0106 | No |
| 47 | SLC13A3 | SLC13A3 Entrez, Source | solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 | 13078 | -0.318 | 0.0199 | No |
