Details for gene set V$DR4

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in class	double_gel_8d
GeneSet	V$DR4_Q2
Enrichment Score (ES)	0.48413777
Normalized Enrichment Score (NES)	1.7189989
Nominal p-value	0.0
FDR q-value	0.049597975
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL1A2	COL1A2 Entrez, Source	collagen, type I, alpha 2	12	1.254	0.1081	Yes
2	ARHGAP24	ARHGAP24 Entrez, Source	Rho GTPase activating protein 24	44	0.838	0.1787	Yes
3	ACTA1	ACTA1 Entrez, Source	actin, alpha 1, skeletal muscle	60	0.762	0.2438	Yes
4	ABCG1	ABCG1 Entrez, Source	ATP-binding cassette, sub-family G (WHITE), member 1	179	0.519	0.2800	Yes
5	SGK	SGK Entrez, Source	serum/glucocorticoid regulated kinase	191	0.498	0.3224	Yes
6	PTK2B	PTK2B Entrez, Source	PTK2B protein tyrosine kinase 2 beta	224	0.463	0.3603	Yes
7	IHPK2	IHPK2 Entrez, Source	inositol hexaphosphate kinase 2	313	0.388	0.3874	Yes
8	NFKBIA	NFKBIA Entrez, Source	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	565	0.265	0.3914	Yes
9	EDN1	EDN1 Entrez, Source	endothelin 1	648	0.245	0.4066	Yes
10	CX3CL1	CX3CL1 Entrez, Source	chemokine (C-X3-C motif) ligand 1	796	0.215	0.4141	Yes
11	FOXP1	FOXP1 Entrez, Source	forkhead box P1	833	0.207	0.4294	Yes
12	ATP1B1	ATP1B1 Entrez, Source	ATPase, Na+/K+ transporting, beta 1 polypeptide	973	0.186	0.4351	Yes
13	OPTN	OPTN Entrez, Source	optineurin	997	0.183	0.4493	Yes
14	PLAG1	PLAG1 Entrez, Source	pleiomorphic adenoma gene 1	1115	0.169	0.4551	Yes
15	ABCA1	ABCA1 Entrez, Source	ATP-binding cassette, sub-family A (ABC1), member 1	1319	0.149	0.4527	Yes
16	RASL11B	RASL11B Entrez, Source	RAS-like, family 11, member B	1364	0.146	0.4621	Yes
17	TNFRSF12A	TNFRSF12A Entrez, Source	tumor necrosis factor receptor superfamily, member 12A	1374	0.145	0.4740	Yes
18	TGOLN2	TGOLN2 Entrez, Source	trans-golgi network protein 2	1434	0.140	0.4817	Yes
19	NDUFS2	NDUFS2 Entrez, Source	NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	1554	0.131	0.4841	Yes
20	LRP3	LRP3 Entrez, Source	low density lipoprotein receptor-related protein 3	1822	0.116	0.4741	No
21	ENO2	ENO2 Entrez, Source	enolase 2 (gamma, neuronal)	1889	0.112	0.4788	No
22	ACSL3	ACSL3 Entrez, Source	acyl-CoA synthetase long-chain family member 3	2116	0.103	0.4707	No
23	HMGB1	HMGB1 Entrez, Source	high-mobility group box 1	2337	0.094	0.4623	No
24	NRG1	NRG1 Entrez, Source	neuregulin 1	2347	0.094	0.4697	No
25	OBSCN	OBSCN Entrez, Source	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	2576	0.084	0.4598	No
26	APLP2	APLP2 Entrez, Source	amyloid beta (A4) precursor-like protein 2	2657	0.082	0.4609	No
27	CX36	CX36 Entrez, Source	-	2695	0.080	0.4651	No
28	ACACA	ACACA Entrez, Source	acetyl-Coenzyme A carboxylase alpha	2948	0.073	0.4524	No
29	ACCN3	ACCN3 Entrez, Source	amiloride-sensitive cation channel 3	3175	0.066	0.4411	No
30	SNIP	SNIP Entrez, Source	-	3301	0.063	0.4371	No
31	COL4A4	COL4A4 Entrez, Source	collagen, type IV, alpha 4	3320	0.062	0.4411	No
32	MYH13	MYH13 Entrez, Source	myosin, heavy chain 13, skeletal muscle	3383	0.061	0.4417	No
33	NR5A2	NR5A2 Entrez, Source	nuclear receptor subfamily 5, group A, member 2	3528	0.057	0.4358	No
34	SLC7A9	SLC7A9 Entrez, Source	solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	3559	0.056	0.4383	No
35	NOVA1	NOVA1 Entrez, Source	neuro-oncological ventral antigen 1	3664	0.053	0.4351	No
36	GREM1	GREM1 Entrez, Source	gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis)	3749	0.051	0.4332	No
37	TEAD3	TEAD3 Entrez, Source	TEA domain family member 3	3839	0.049	0.4308	No
38	ERBB3	ERBB3 Entrez, Source	v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	4005	0.044	0.4222	No
39	ATP5G3	ATP5G3 Entrez, Source	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	4011	0.044	0.4256	No
40	APOC1	APOC1 Entrez, Source	apolipoprotein C-I	4022	0.044	0.4287	No
41	MAP1LC3A	MAP1LC3A Entrez, Source	microtubule-associated protein 1 light chain 3 alpha	4039	0.044	0.4313	No
42	NPEPPS	NPEPPS Entrez, Source	aminopeptidase puromycin sensitive	4043	0.044	0.4348	No
43	TGFB3	TGFB3 Entrez, Source	transforming growth factor, beta 3	4113	0.042	0.4333	No
44	NDUFS4	NDUFS4 Entrez, Source	NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)	4767	0.029	0.3864	No
45	ATP1A2	ATP1A2 Entrez, Source	ATPase, Na+/K+ transporting, alpha 2 (+) polypeptide	4943	0.025	0.3754	No
46	GGPS1	GGPS1 Entrez, Source	geranylgeranyl diphosphate synthase 1	5108	0.022	0.3649	No
47	DLX1	DLX1 Entrez, Source	distal-less homeobox 1	5243	0.020	0.3565	No
48	AMHR2	AMHR2 Entrez, Source	anti-Mullerian hormone receptor, type II	5408	0.017	0.3456	No
49	NLGN3	NLGN3 Entrez, Source	neuroligin 3	5467	0.016	0.3425	No
50	NEUROG1	NEUROG1 Entrez, Source	neurogenin 1	5488	0.015	0.3423	No
51	PPARD	PPARD Entrez, Source	peroxisome proliferative activated receptor, delta	5532	0.014	0.3403	No
52	ATP5G1	ATP5G1 Entrez, Source	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)	5604	0.013	0.3361	No
53	SNF1LK	SNF1LK Entrez, Source	SNF1-like kinase	5650	0.012	0.3337	No
54	GNB2	GNB2 Entrez, Source	guanine nucleotide binding protein (G protein), beta polypeptide 2	5801	0.009	0.3231	No
55	ADD3	ADD3 Entrez, Source	adducin 3 (gamma)	5820	0.009	0.3225	No
56	FOXD3	FOXD3 Entrez, Source	forkhead box D3	5876	0.008	0.3190	No
57	RELA	RELA Entrez, Source	v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian)	5892	0.007	0.3185	No
58	UQCRC1	UQCRC1 Entrez, Source	ubiquinol-cytochrome c reductase core protein I	5927	0.007	0.3165	No
59	FGF11	FGF11 Entrez, Source	fibroblast growth factor 11	5965	0.006	0.3143	No
60	PEX11B	PEX11B Entrez, Source	peroxisomal biogenesis factor 11B	5988	0.005	0.3131	No
61	CTBP2	CTBP2 Entrez, Source	C-terminal binding protein 2	5997	0.005	0.3129	No
62	DCX	DCX Entrez, Source	doublecortex; lissencephaly, X-linked (doublecortin)	6186	0.001	0.2988	No
63	NELL2	NELL2 Entrez, Source	NEL-like 2 (chicken)	6480	-0.003	0.2770	No
64	MYH6	MYH6 Entrez, Source	myosin, heavy chain 6, cardiac muscle, alpha (cardiomyopathy, hypertrophic 1)	6716	-0.007	0.2599	No
65	NNAT	NNAT Entrez, Source	neuronatin	6767	-0.008	0.2568	No
66	HRH3	HRH3 Entrez, Source	histamine receptor H3	6821	-0.009	0.2536	No
67	ACY1	ACY1 Entrez, Source	aminoacylase 1	6868	-0.010	0.2510	No
68	SEMA6C	SEMA6C Entrez, Source	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	6955	-0.011	0.2455	No
69	NXPH4	NXPH4 Entrez, Source	neurexophilin 4	7004	-0.012	0.2430	No
70	GART	GART Entrez, Source	phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase	7019	-0.013	0.2430	No
71	CRABP2	CRABP2 Entrez, Source	cellular retinoic acid binding protein 2	7366	-0.019	0.2185	No
72	GDNF	GDNF Entrez, Source	glial cell derived neurotrophic factor	7663	-0.025	0.1983	No
73	SCAMP3	SCAMP3 Entrez, Source	secretory carrier membrane protein 3	7665	-0.025	0.2004	No
74	PCSK1N	PCSK1N Entrez, Source	proprotein convertase subtilisin/kexin type 1 inhibitor	7755	-0.026	0.1960	No
75	KCND3	KCND3 Entrez, Source	potassium voltage-gated channel, Shal-related subfamily, member 3	7872	-0.029	0.1897	No
76	ESRRA	ESRRA Entrez, Source	estrogen-related receptor alpha	8092	-0.033	0.1761	No
77	CAMKK2	CAMKK2 Entrez, Source	calcium/calmodulin-dependent protein kinase kinase 2, beta	8568	-0.043	0.1439	No
78	RARA	RARA Entrez, Source	retinoic acid receptor, alpha	8595	-0.043	0.1457	No
79	PGF	PGF Entrez, Source	placental growth factor, vascular endothelial growth factor-related protein	8718	-0.046	0.1405	No
80	TFEB	TFEB Entrez, Source	transcription factor EB	8952	-0.051	0.1273	No
81	RAB10	RAB10 Entrez, Source	RAB10, member RAS oncogene family	9126	-0.055	0.1190	No
82	SON	SON Entrez, Source	SON DNA binding protein	9229	-0.057	0.1162	No
83	GAD1	GAD1 Entrez, Source	glutamate decarboxylase 1 (brain, 67kDa)	9270	-0.057	0.1182	No
84	SFRS7	SFRS7 Entrez, Source	splicing factor, arginine/serine-rich 7, 35kDa	9277	-0.058	0.1227	No
85	BTBD14B	BTBD14B Entrez, Source	BTB (POZ) domain containing 14B	9670	-0.067	0.0989	No
86	UBE2D3	UBE2D3 Entrez, Source	ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	9797	-0.071	0.0956	No
87	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	9896	-0.074	0.0946	No
88	PHF12	PHF12 Entrez, Source	PHD finger protein 12	9978	-0.076	0.0950	No
89	TIMM10	TIMM10 Entrez, Source	translocase of inner mitochondrial membrane 10 homolog (yeast)	10050	-0.078	0.0965	No
90	PUM2	PUM2 Entrez, Source	pumilio homolog 2 (Drosophila)	10272	-0.084	0.0870	No
91	IL11	IL11 Entrez, Source	interleukin 11	10348	-0.086	0.0888	No
92	AMD1	AMD1 Entrez, Source	adenosylmethionine decarboxylase 1	10528	-0.091	0.0832	No
93	EIF4G1	EIF4G1 Entrez, Source	eukaryotic translation initiation factor 4 gamma, 1	10984	-0.108	0.0582	No
94	DDX17	DDX17 Entrez, Source	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	11050	-0.110	0.0629	No
95	ADM	ADM Entrez, Source	adrenomedullin	11063	-0.110	0.0716	No
96	PDGFRL	PDGFRL Entrez, Source	platelet-derived growth factor receptor-like	11182	-0.116	0.0727	No
97	PCTK2	PCTK2 Entrez, Source	PCTAIRE protein kinase 2	11205	-0.116	0.0811	No
98	ID2	ID2 Entrez, Source	inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	11229	-0.117	0.0896	No
99	POLR3C	POLR3C Entrez, Source	polymerase (RNA) III (DNA directed) polypeptide C (62kD)	11398	-0.125	0.0877	No
100	BZW1	BZW1 Entrez, Source	basic leucine zipper and W2 domains 1	11682	-0.137	0.0783	No
101	ARID4B	ARID4B Entrez, Source	AT rich interactive domain 4B (RBP1- like)	12232	-0.174	0.0519	No
102	ADNP	ADNP Entrez, Source	activity-dependent neuroprotector	12323	-0.181	0.0609	No
103	NR1D1	NR1D1 Entrez, Source	nuclear receptor subfamily 1, group D, member 1	12353	-0.184	0.0747	No