Details for gene set V$IK3

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in class	double_gel_8d
GeneSet	V$IK3_01
Enrichment Score (ES)	0.5044467
Normalized Enrichment Score (NES)	1.761194
Nominal p-value	0.0
FDR q-value	0.037264533
FWER p-Value	0.99

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CYP17A1	CYP17A1 Entrez, Source	cytochrome P450, family 17, subfamily A, polypeptide 1	2	1.623	0.1323	Yes
2	FOS	FOS Entrez, Source	v-fos FBJ murine osteosarcoma viral oncogene homolog	3	1.622	0.2648	Yes
3	CCL20	CCL20 Entrez, Source	chemokine (C-C motif) ligand 20	27	0.963	0.3416	Yes
4	RGS5	RGS5 Entrez, Source	regulator of G-protein signalling 5	125	0.616	0.3846	Yes
5	JAG1	JAG1 Entrez, Source	jagged 1 (Alagille syndrome)	318	0.386	0.4016	Yes
6	RHBDF1	RHBDF1 Entrez, Source	rhomboid 5 homolog 1 (Drosophila)	506	0.283	0.4106	Yes
7	HCST	HCST Entrez, Source	hematopoietic cell signal transducer	517	0.280	0.4327	Yes
8	NFKBIA	NFKBIA Entrez, Source	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	565	0.265	0.4508	Yes
9	TYRO3	TYRO3 Entrez, Source	TYRO3 protein tyrosine kinase	597	0.258	0.4695	Yes
10	ADAM15	ADAM15 Entrez, Source	ADAM metallopeptidase domain 15 (metargidin)	837	0.207	0.4683	Yes
11	MKNK2	MKNK2 Entrez, Source	MAP kinase interacting serine/threonine kinase 2	842	0.206	0.4848	Yes
12	IGSF4	IGSF4 Entrez, Source	immunoglobulin superfamily, member 4	932	0.190	0.4936	Yes
13	CYR61	CYR61 Entrez, Source	cysteine-rich, angiogenic inducer, 61	1062	0.175	0.4981	Yes
14	PPAP2B	PPAP2B Entrez, Source	phosphatidic acid phosphatase type 2B	1157	0.164	0.5044	Yes
15	TIMP3	TIMP3 Entrez, Source	TIMP metallopeptidase inhibitor 3 (Sorsby fundus dystrophy, pseudoinflammatory)	1445	0.139	0.4941	No
16	EGR1	EGR1 Entrez, Source	early growth response 1	1666	0.124	0.4877	No
17	PROK2	PROK2 Entrez, Source	prokineticin 2	1757	0.119	0.4906	No
18	CBX8	CBX8 Entrez, Source	chromobox homolog 8 (Pc class homolog, Drosophila)	1783	0.118	0.4983	No
19	KCNA4	KCNA4 Entrez, Source	potassium voltage-gated channel, shaker-related subfamily, member 4	2019	0.107	0.4893	No
20	VAMP3	VAMP3 Entrez, Source	vesicle-associated membrane protein 3 (cellubrevin)	2057	0.105	0.4951	No
21	KCNJ13	KCNJ13 Entrez, Source	potassium inwardly-rectifying channel, subfamily J, member 13	2073	0.105	0.5025	No
22	SEMA3A	SEMA3A Entrez, Source	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	2466	0.089	0.4802	No
23	HMGA2	HMGA2 Entrez, Source	high mobility group AT-hook 2	2548	0.086	0.4811	No
24	FGF10	FGF10 Entrez, Source	fibroblast growth factor 10	2765	0.078	0.4711	No
25	CEPT1	CEPT1 Entrez, Source	choline/ethanolamine phosphotransferase 1	2998	0.071	0.4594	No
26	RAB11B	RAB11B Entrez, Source	RAB11B, member RAS oncogene family	3071	0.069	0.4596	No
27	CXCL5	CXCL5 Entrez, Source	chemokine (C-X-C motif) ligand 5	3208	0.065	0.4547	No
28	RBBP9	RBBP9 Entrez, Source	retinoblastoma binding protein 9	3213	0.065	0.4598	No
29	CNTN4	CNTN4 Entrez, Source	contactin 4	3319	0.062	0.4569	No
30	TRAPPC3	TRAPPC3 Entrez, Source	trafficking protein particle complex 3	3333	0.062	0.4610	No
31	ACTN1	ACTN1 Entrez, Source	actinin, alpha 1	3460	0.059	0.4562	No
32	FGF20	FGF20 Entrez, Source	fibroblast growth factor 20	3530	0.057	0.4557	No
33	KIFC3	KIFC3 Entrez, Source	kinesin family member C3	3636	0.054	0.4521	No
34	NAPG	NAPG Entrez, Source	N-ethylmaleimide-sensitive factor attachment protein, gamma	3699	0.052	0.4517	No
35	EGR3	EGR3 Entrez, Source	early growth response 3	3704	0.052	0.4557	No
36	MAG	MAG Entrez, Source	myelin associated glycoprotein	4004	0.044	0.4367	No
37	MAP1LC3A	MAP1LC3A Entrez, Source	microtubule-associated protein 1 light chain 3 alpha	4039	0.044	0.4377	No
38	DHRS4	DHRS4 Entrez, Source	dehydrogenase/reductase (SDR family) member 4	4095	0.042	0.4370	No
39	ESM1	ESM1 Entrez, Source	endothelial cell-specific molecule 1	4360	0.037	0.4201	No
40	SNX16	SNX16 Entrez, Source	sorting nexin 16	4434	0.035	0.4174	No
41	KCNH2	KCNH2 Entrez, Source	potassium voltage-gated channel, subfamily H (eag-related), member 2	4785	0.028	0.3933	No
42	RAMP2	RAMP2 Entrez, Source	receptor (calcitonin) activity modifying protein 2	4826	0.027	0.3925	No
43	ACCN2	ACCN2 Entrez, Source	amiloride-sensitive cation channel 2, neuronal	5147	0.021	0.3701	No
44	C7ORF10	C7ORF10 Entrez, Source	chromosome 7 open reading frame 10	5156	0.021	0.3712	No
45	VSNL1	VSNL1 Entrez, Source	visinin-like 1	5194	0.020	0.3701	No
46	RTN1	RTN1 Entrez, Source	reticulon 1	5323	0.018	0.3620	No
47	APBA1	APBA1 Entrez, Source	amyloid beta (A4) precursor protein-binding, family A, member 1 (X11)	5471	0.015	0.3521	No
48	GABBR1	GABBR1 Entrez, Source	gamma-aminobutyric acid (GABA) B receptor, 1	5513	0.014	0.3502	No
49	SERPINI1	SERPINI1 Entrez, Source	serpin peptidase inhibitor, clade I (neuroserpin), member 1	5563	0.013	0.3476	No
50	PSD	PSD Entrez, Source	pleckstrin and Sec7 domain containing	5571	0.013	0.3482	No
51	SLIT3	SLIT3 Entrez, Source	slit homolog 3 (Drosophila)	5734	0.010	0.3368	No
52	CDK9	CDK9 Entrez, Source	cyclin-dependent kinase 9 (CDC2-related kinase)	5738	0.010	0.3374	No
53	GATA3	GATA3 Entrez, Source	GATA binding protein 3	6151	0.002	0.3065	No
54	DCX	DCX Entrez, Source	doublecortex; lissencephaly, X-linked (doublecortin)	6186	0.001	0.3040	No
55	MSX1	MSX1 Entrez, Source	msh homeobox homolog 1 (Drosophila)	6299	-0.000	0.2956	No
56	PTGES	PTGES Entrez, Source	prostaglandin E synthase	6415	-0.002	0.2871	No
57	GNAO1	GNAO1 Entrez, Source	guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O	6475	-0.003	0.2829	No
58	SIRT6	SIRT6 Entrez, Source	sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae)	6551	-0.005	0.2776	No
59	ANK3	ANK3 Entrez, Source	ankyrin 3, node of Ranvier (ankyrin G)	6582	-0.005	0.2757	No
60	PRRX1	PRRX1 Entrez, Source	paired related homeobox 1	6636	-0.006	0.2723	No
61	PPP2R2B	PPP2R2B Entrez, Source	protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	6664	-0.007	0.2708	No
62	WSB2	WSB2 Entrez, Source	WD repeat and SOCS box-containing 2	6832	-0.009	0.2589	No
63	CHRNB2	CHRNB2 Entrez, Source	cholinergic receptor, nicotinic, beta 2 (neuronal)	6897	-0.010	0.2549	No
64	TMC4	TMC4 Entrez, Source	transmembrane channel-like 4	7210	-0.016	0.2327	No
65	USP52	USP52 Entrez, Source	ubiquitin specific peptidase 52	7291	-0.018	0.2281	No
66	GABRB1	GABRB1 Entrez, Source	gamma-aminobutyric acid (GABA) A receptor, beta 1	7638	-0.024	0.2040	No
67	CHAD	CHAD Entrez, Source	chondroadherin	7677	-0.025	0.2031	No
68	SLC6A9	SLC6A9 Entrez, Source	solute carrier family 6 (neurotransmitter transporter, glycine), member 9	7789	-0.027	0.1970	No
69	PPP1CB	PPP1CB Entrez, Source	protein phosphatase 1, catalytic subunit, beta isoform	7860	-0.028	0.1940	No
70	OTX1	OTX1 Entrez, Source	orthodenticle homolog 1 (Drosophila)	7894	-0.029	0.1939	No
71	FLNC	FLNC Entrez, Source	filamin C, gamma (actin binding protein 280)	7939	-0.030	0.1930	No
72	SLC38A5	SLC38A5 Entrez, Source	solute carrier family 38, member 5	8010	-0.031	0.1903	No
73	SMPX	SMPX Entrez, Source	small muscle protein, X-linked	8166	-0.035	0.1814	No
74	HCN3	HCN3 Entrez, Source	hyperpolarization activated cyclic nucleotide-gated potassium channel 3	8351	-0.038	0.1707	No
75	DIO2	DIO2 Entrez, Source	deiodinase, iodothyronine, type II	8533	-0.042	0.1604	No
76	AMBN	AMBN Entrez, Source	ameloblastin (enamel matrix protein)	8671	-0.045	0.1538	No
77	ACE2	ACE2 Entrez, Source	angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	9170	-0.055	0.1207	No
78	GRIN2B	GRIN2B Entrez, Source	glutamate receptor, ionotropic, N-methyl D-aspartate 2B	9200	-0.056	0.1231	No
79	SLC30A3	SLC30A3 Entrez, Source	solute carrier family 30 (zinc transporter), member 3	9521	-0.063	0.1041	No
80	ASCL3	ASCL3 Entrez, Source	achaete-scute complex (Drosophila) homolog-like 3	9680	-0.067	0.0977	No
81	SYNPR	SYNPR Entrez, Source	synaptoporin	9740	-0.069	0.0988	No
82	LIFR	LIFR Entrez, Source	leukemia inhibitory factor receptor alpha	9964	-0.075	0.0882	No
83	TNNI2	TNNI2 Entrez, Source	troponin I type 2 (skeletal, fast)	10004	-0.077	0.0915	No
84	MADD	MADD Entrez, Source	MAP-kinase activating death domain	10009	-0.077	0.0975	No
85	C2	C2 Entrez, Source	complement component 2	10542	-0.091	0.0648	No
86	FGF17	FGF17 Entrez, Source	fibroblast growth factor 17	10631	-0.095	0.0659	No
87	TCF8	TCF8 Entrez, Source	transcription factor 8 (represses interleukin 2 expression)	10979	-0.107	0.0484	No
88	UBXD2	UBXD2 Entrez, Source	UBX domain containing 2	11474	-0.128	0.0216	No
89	RBX1	RBX1 Entrez, Source	ring-box 1	11606	-0.134	0.0226	No
90	EIF4A2	EIF4A2 Entrez, Source	eukaryotic translation initiation factor 4A, isoform 2	11996	-0.157	0.0061	No
91	MECP2	MECP2 Entrez, Source	methyl CpG binding protein 2 (Rett syndrome)	12609	-0.212	-0.0228	No
92	RHOQ	RHOQ Entrez, Source	ras homolog gene family, member Q	12780	-0.238	-0.0162	No
93	XPO1	XPO1 Entrez, Source	exportin 1 (CRM1 homolog, yeast)	13111	-0.334	-0.0139	No
94	IGFALS	IGFALS Entrez, Source	insulin-like growth factor binding protein, acid labile subunit	13179	-0.383	0.0123	No