Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_24h.class.cls
#double_gel_8d_versus_double_gel_24h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in classdouble_gel_8d
GeneSetV$OCT1_B
Enrichment Score (ES)0.48713198
Normalized Enrichment Score (NES)1.7603867
Nominal p-value0.0
FDR q-value0.037113436
FWER p-Value0.991
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$OCT1_B   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MAFMAF
Entrez,  Source
v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)310.9350.0749Yes
2PFKFB1PFKFB1
Entrez,  Source
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1470.8290.1423Yes
3LPLLPL
Entrez,  Source
lipoprotein lipase1070.6460.1912Yes
4GPM6AGPM6A
Entrez,  Source
glycoprotein M6A1650.5400.2316Yes
5ALDH1A1ALDH1A1
Entrez,  Source
aldehyde dehydrogenase 1 family, member A11850.5100.2723Yes
6EGR2EGR2
Entrez,  Source
early growth response 2 (Krox-20 homolog, Drosophila)3120.3900.2950Yes
7CDH13CDH13
Entrez,  Source
cadherin 13, H-cadherin (heart)4170.3280.3143Yes
8GPC4GPC4
Entrez,  Source
glypican 45770.2620.3239Yes
9NFIANFIA
Entrez,  Source
nuclear factor I/A5810.2620.3453Yes
10PPP2R3APPP2R3A
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha6030.2570.3649Yes
11TWIST1TWIST1
Entrez,  Source
twist homolog 1 (acrocephalosyndactyly 3; Saethre-Chotzen syndrome) (Drosophila)8130.2110.3666Yes
12FOXP1FOXP1
Entrez,  Source
forkhead box P18330.2070.3823Yes
13MRASMRAS
Entrez,  Source
muscle RAS oncogene homolog8630.2010.3968Yes
14ADORA1ADORA1
Entrez,  Source
adenosine A1 receptor9010.1950.4101Yes
15IGSF4IGSF4
Entrez,  Source
immunoglobulin superfamily, member 49320.1900.4236Yes
16CPDCPD
Entrez,  Source
carboxypeptidase D10240.1790.4315Yes
17CYR61CYR61
Entrez,  Source
cysteine-rich, angiogenic inducer, 6110620.1750.4432Yes
18DPYSL3DPYSL3
Entrez,  Source
dihydropyrimidinase-like 311630.1640.4492Yes
19CDX2CDX2
Entrez,  Source
caudal type homeobox transcription factor 211700.1630.4622Yes
20BDNFBDNF
Entrez,  Source
brain-derived neurotrophic factor12180.1590.4718Yes
21FGF12FGF12
Entrez,  Source
fibroblast growth factor 1213340.1480.4754Yes
22POLMPOLM
Entrez,  Source
polymerase (DNA directed), mu13410.1480.4871Yes
23RHOBRHOB
Entrez,  Source
ras homolog gene family, member B20720.1050.4406No
24TBXAS1TBXAS1
Entrez,  Source
thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)20890.1040.4480No
25SLC24A1SLC24A1
Entrez,  Source
solute carrier family 24 (sodium/potassium/calcium exchanger), member 122100.0990.4471No
26CSF3CSF3
Entrez,  Source
colony stimulating factor 3 (granulocyte)23060.0950.4478No
27DUSP6DUSP6
Entrez,  Source
dual specificity phosphatase 624900.0880.4413No
28ITPR3ITPR3
Entrez,  Source
inositol 1,4,5-triphosphate receptor, type 325610.0850.4430No
29BLNKBLNK
Entrez,  Source
B-cell linker27430.0790.4358No
30PPARGC1BPPARGC1B
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, beta27820.0770.4393No
31OTX2OTX2
Entrez,  Source
orthodenticle homolog 2 (Drosophila)28310.0760.4420No
32GNB3GNB3
Entrez,  Source
guanine nucleotide binding protein (G protein), beta polypeptide 328460.0760.4472No
33LMO3LMO3
Entrez,  Source
LIM domain only 3 (rhombotin-like 2)30370.0700.4387No
34TMOD2TMOD2
Entrez,  Source
tropomodulin 2 (neuronal)31420.0670.4364No
35SLC1A2SLC1A2
Entrez,  Source
solute carrier family 1 (glial high affinity glutamate transporter), member 232190.0650.4360No
36SFRP2SFRP2
Entrez,  Source
secreted frizzled-related protein 232470.0640.4393No
37NFYBNFYB
Entrez,  Source
nuclear transcription factor Y, beta33420.0610.4372No
38EAF2EAF2
Entrez,  Source
ELL associated factor 234550.0590.4336No
39ID3ID3
Entrez,  Source
inhibitor of DNA binding 3, dominant negative helix-loop-helix protein34790.0580.4367No
40POU2F3POU2F3
Entrez,  Source
POU domain, class 2, transcription factor 335080.0570.4393No
41ARPC5ARPC5
Entrez,  Source
actin related protein 2/3 complex, subunit 5, 16kDa36750.0530.4312No
42STAT4STAT4
Entrez,  Source
signal transducer and activator of transcription 436970.0520.4339No
43CRISP1CRISP1
Entrez,  Source
cysteine-rich secretory protein 137060.0520.4376No
44POU3F4POU3F4
Entrez,  Source
POU domain, class 3, transcription factor 438430.0490.4314No
45SH3GL3SH3GL3
Entrez,  Source
SH3-domain GRB2-like 340150.0440.4221No
46BCL2BCL2
Entrez,  Source
B-cell CLL/lymphoma 241870.0400.4125No
47HPCAL4HPCAL4
Entrez,  Source
hippocalcin like 442430.0390.4115No
48GAB2GAB2
Entrez,  Source
GRB2-associated binding protein 242770.0380.4121No
49MAP2K6MAP2K6
Entrez,  Source
mitogen-activated protein kinase kinase 645100.0340.3974No
50FZD2FZD2
Entrez,  Source
frizzled homolog 2 (Drosophila)45300.0330.3987No
51PTHLHPTHLH
Entrez,  Source
parathyroid hormone-like hormone45950.0320.3965No
52RHOBTB2RHOBTB2
Entrez,  Source
Rho-related BTB domain containing 246990.0300.3912No
53SLC6A15SLC6A15
Entrez,  Source
solute carrier family 6, member 1547390.0290.3907No
54ARHGAP4ARHGAP4
Entrez,  Source
Rho GTPase activating protein 447930.0280.3890No
55RAB26RAB26
Entrez,  Source
RAB26, member RAS oncogene family48230.0280.3891No
56THRATHRA
Entrez,  Source
thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian)49840.0240.3790No
57TSC1TSC1
Entrez,  Source
tuberous sclerosis 149920.0240.3805No
58ACBD4ACBD4
Entrez,  Source
acyl-Coenzyme A binding domain containing 451900.0200.3673No
59VSNL1VSNL1
Entrez,  Source
visinin-like 151940.0200.3688No
60JUNDJUND
Entrez,  Source
jun D proto-oncogene52890.0190.3632No
61COL23A1COL23A1
Entrez,  Source
collagen, type XXIII, alpha 153290.0180.3618No
62GPR4GPR4
Entrez,  Source
G protein-coupled receptor 454120.0160.3570No
63NEUROG1NEUROG1
Entrez,  Source
neurogenin 154880.0150.3525No
64NRXN3NRXN3
Entrez,  Source
neurexin 357700.0100.3321No
65CD79BCD79B
Entrez,  Source
CD79b molecule, immunoglobulin-associated beta58710.0080.3252No
66PDE4DPDE4D
Entrez,  Source
phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila)58900.0070.3244No
67SLC39A13SLC39A13
Entrez,  Source
solute carrier family 39 (zinc transporter), member 1359120.0070.3234No
68TRPM1TRPM1
Entrez,  Source
transient receptor potential cation channel, subfamily M, member 160430.0040.3139No
69LRRN1LRRN1
Entrez,  Source
leucine rich repeat neuronal 160690.0040.3124No
70KCNN3KCNN3
Entrez,  Source
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 361980.0010.3028No
71PCYT1BPCYT1B
Entrez,  Source
phosphate cytidylyltransferase 1, choline, beta62290.0010.3006No
72IFIT2IFIT2
Entrez,  Source
interferon-induced protein with tetratricopeptide repeats 26336-0.0010.2926No
73NR2C2NR2C2
Entrez,  Source
nuclear receptor subfamily 2, group C, member 26511-0.0040.2798No
74NRXN1NRXN1
Entrez,  Source
neurexin 16602-0.0060.2735No
75PRRX1PRRX1
Entrez,  Source
paired related homeobox 16636-0.0060.2715No
76CXXC4CXXC4
Entrez,  Source
CXXC finger 46637-0.0060.2720No
77NRASNRAS
Entrez,  Source
neuroblastoma RAS viral (v-ras) oncogene homolog6918-0.0110.2518No
78NOTCH1NOTCH1
Entrez,  Source
Notch homolog 1, translocation-associated (Drosophila)7067-0.0140.2417No
79MYBPC1MYBPC1
Entrez,  Source
myosin binding protein C, slow type7507-0.0220.2103No
80CD86CD86
Entrez,  Source
CD86 molecule7686-0.0250.1989No
81PAX6PAX6
Entrez,  Source
paired box gene 6 (aniridia, keratitis)7732-0.0260.1977No
82DLGAP4DLGAP4
Entrez,  Source
discs, large (Drosophila) homolog-associated protein 47775-0.0270.1967No
83ALKALK
Entrez,  Source
anaplastic lymphoma kinase (Ki-1)7870-0.0290.1920No
84TCF2TCF2
Entrez,  Source
transcription factor 2, hepatic; LF-B3; variant hepatic nuclear factor7953-0.0300.1883No
85ESRRAESRRA
Entrez,  Source
estrogen-related receptor alpha8092-0.0330.1806No
86CDK2CDK2
Entrez,  Source
cyclin-dependent kinase 28169-0.0350.1777No
87FGF14FGF14
Entrez,  Source
fibroblast growth factor 148295-0.0370.1714No
88NXPH1NXPH1
Entrez,  Source
neurexophilin 18833-0.0490.1348No
89ADORA2AADORA2A
Entrez,  Source
adenosine A2a receptor8894-0.0500.1344No
90H3F3BH3F3B
Entrez,  Source
H3 histone, family 3B (H3.3B)9390-0.0600.1020No
91ASCL3ASCL3
Entrez,  Source
achaete-scute complex (Drosophila) homolog-like 39680-0.0670.0857No
92SYNPRSYNPR
Entrez,  Source
synaptoporin9740-0.0690.0870No
93DMDDMD
Entrez,  Source
dystrophin (muscular dystrophy, Duchenne and Becker types)9896-0.0740.0813No
94CRYZL1CRYZL1
Entrez,  Source
crystallin, zeta (quinone reductase)-like 110057-0.0780.0757No
95TSGA14TSGA14
Entrez,  Source
testis specific, 1410225-0.0820.0699No
96LYNLYN
Entrez,  Source
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog10258-0.0830.0743No
97MID1MID1
Entrez,  Source
midline 1 (Opitz/BBB syndrome)10356-0.0860.0741No
98BIN3BIN3
Entrez,  Source
bridging integrator 310638-0.0950.0608No
99ITSN1ITSN1
Entrez,  Source
intersectin 1 (SH3 domain protein)10914-0.1050.0487No
100TAS2R13TAS2R13
Entrez,  Source
taste receptor, type 2, member 1311390-0.1240.0231No
101TCF12TCF12
Entrez,  Source
transcription factor 12 (HTF4, helix-loop-helix transcription factors 4)11550-0.1310.0219No
102CSNK1ECSNK1E
Entrez,  Source
casein kinase 1, epsilon11711-0.1390.0213No
103ABTB2ABTB2
Entrez,  Source
ankyrin repeat and BTB (POZ) domain containing 211886-0.1490.0205No
104PTENPTEN
Entrez,  Source
phosphatase and tensin homolog (mutated in multiple advanced cancers 1)11925-0.1520.0301No
105BAT2BAT2
Entrez,  Source
HLA-B associated transcript 212112-0.1660.0297No
106NR1D1NR1D1
Entrez,  Source
nuclear receptor subfamily 1, group D, member 112353-0.1840.0268No
107NDNL2NDNL2
Entrez,  Source
necdin-like 212975-0.2850.0034No
108TCEAL1TCEAL1
Entrez,  Source
transcription elongation factor A (SII)-like 113002-0.2930.0257No
Table: GSEA details [plain text format]



Fig 2: V$OCT1_B   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$OCT1_B: Random ES distribution   
Gene set null distribution of ES for V$OCT1_B