Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | V$STAT5A_02 |
| Enrichment Score (ES) | 0.536127 |
| Normalized Enrichment Score (NES) | 1.7659594 |
| Nominal p-value | 0.0036968577 |
| FDR q-value | 0.03565402 |
| FWER p-Value | 0.988 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 3 | 1.622 | 0.1775 | Yes |
| 2 | CCND2 | CCND2 Entrez, Source | cyclin D2 | 21 | 1.039 | 0.2900 | Yes |
| 3 | EMP1 | EMP1 Entrez, Source | epithelial membrane protein 1 | 119 | 0.621 | 0.3508 | Yes |
| 4 | CITED4 | CITED4 Entrez, Source | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 | 174 | 0.524 | 0.4041 | Yes |
| 5 | KLF4 | KLF4 Entrez, Source | Kruppel-like factor 4 (gut) | 255 | 0.437 | 0.4460 | Yes |
| 6 | PDK4 | PDK4 Entrez, Source | pyruvate dehydrogenase kinase, isozyme 4 | 285 | 0.410 | 0.4887 | Yes |
| 7 | MAT1A | MAT1A Entrez, Source | methionine adenosyltransferase I, alpha | 362 | 0.357 | 0.5222 | Yes |
| 8 | GSN | GSN Entrez, Source | gelsolin (amyloidosis, Finnish type) | 666 | 0.242 | 0.5259 | Yes |
| 9 | FOXP1 | FOXP1 Entrez, Source | forkhead box P1 | 833 | 0.207 | 0.5361 | Yes |
| 10 | BDNF | BDNF Entrez, Source | brain-derived neurotrophic factor | 1218 | 0.159 | 0.5247 | No |
| 11 | ERBB4 | ERBB4 Entrez, Source | v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) | 1601 | 0.128 | 0.5100 | No |
| 12 | VIP | VIP Entrez, Source | vasoactive intestinal peptide | 1849 | 0.114 | 0.5039 | No |
| 13 | CACNB2 | CACNB2 Entrez, Source | calcium channel, voltage-dependent, beta 2 subunit | 1994 | 0.108 | 0.5049 | No |
| 14 | OBSCN | OBSCN Entrez, Source | obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF | 2576 | 0.084 | 0.4704 | No |
| 15 | ATP5J | ATP5J Entrez, Source | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6 | 2738 | 0.079 | 0.4669 | No |
| 16 | MBNL1 | MBNL1 Entrez, Source | muscleblind-like (Drosophila) | 2930 | 0.073 | 0.4606 | No |
| 17 | ENPP2 | ENPP2 Entrez, Source | ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin) | 2952 | 0.072 | 0.4669 | No |
| 18 | PCSK2 | PCSK2 Entrez, Source | proprotein convertase subtilisin/kexin type 2 | 2972 | 0.072 | 0.4734 | No |
| 19 | SOCS2 | SOCS2 Entrez, Source | suppressor of cytokine signaling 2 | 3280 | 0.063 | 0.4572 | No |
| 20 | SP110 | SP110 Entrez, Source | SP110 nuclear body protein | 3660 | 0.053 | 0.4345 | No |
| 21 | BTRC | BTRC Entrez, Source | beta-transducin repeat containing | 4316 | 0.037 | 0.3893 | No |
| 22 | GBX2 | GBX2 Entrez, Source | gastrulation brain homeobox 2 | 4453 | 0.035 | 0.3829 | No |
| 23 | FZD6 | FZD6 Entrez, Source | frizzled homolog 6 (Drosophila) | 4516 | 0.034 | 0.3819 | No |
| 24 | ARF3 | ARF3 Entrez, Source | ADP-ribosylation factor 3 | 4689 | 0.030 | 0.3723 | No |
| 25 | ARL4A | ARL4A Entrez, Source | ADP-ribosylation factor-like 4A | 4734 | 0.029 | 0.3722 | No |
| 26 | NR4A3 | NR4A3 Entrez, Source | nuclear receptor subfamily 4, group A, member 3 | 4753 | 0.029 | 0.3740 | No |
| 27 | STC1 | STC1 Entrez, Source | stanniocalcin 1 | 4795 | 0.028 | 0.3740 | No |
| 28 | DDX25 | DDX25 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 | 4802 | 0.028 | 0.3766 | No |
| 29 | SRPX | SRPX Entrez, Source | sushi-repeat-containing protein, X-linked | 5153 | 0.021 | 0.3525 | No |
| 30 | PTPN21 | PTPN21 Entrez, Source | protein tyrosine phosphatase, non-receptor type 21 | 5429 | 0.016 | 0.3336 | No |
| 31 | CDC37L1 | CDC37L1 Entrez, Source | CDC37 cell division cycle 37 homolog (S. cerevisiae)-like 1 | 5497 | 0.015 | 0.3302 | No |
| 32 | ATF4 | ATF4 Entrez, Source | activating transcription factor 4 (tax-responsive enhancer element B67) | 6295 | -0.000 | 0.2702 | No |
| 33 | GLRA2 | GLRA2 Entrez, Source | glycine receptor, alpha 2 | 6446 | -0.002 | 0.2592 | No |
| 34 | KCNJ8 | KCNJ8 Entrez, Source | potassium inwardly-rectifying channel, subfamily J, member 8 | 6463 | -0.003 | 0.2583 | No |
| 35 | GFAP | GFAP Entrez, Source | glial fibrillary acidic protein | 7152 | -0.015 | 0.2081 | No |
| 36 | GRID2 | GRID2 Entrez, Source | glutamate receptor, ionotropic, delta 2 | 7487 | -0.021 | 0.1853 | No |
| 37 | BCL2L1 | BCL2L1 Entrez, Source | BCL2-like 1 | 7544 | -0.022 | 0.1836 | No |
| 38 | GABRB1 | GABRB1 Entrez, Source | gamma-aminobutyric acid (GABA) A receptor, beta 1 | 7638 | -0.024 | 0.1792 | No |
| 39 | GJA5 | GJA5 Entrez, Source | gap junction protein, alpha 5, 40kDa (connexin 40) | 7650 | -0.025 | 0.1811 | No |
| 40 | SREBF1 | SREBF1 Entrez, Source | sterol regulatory element binding transcription factor 1 | 7713 | -0.026 | 0.1792 | No |
| 41 | RARA | RARA Entrez, Source | retinoic acid receptor, alpha | 8595 | -0.043 | 0.1177 | No |
| 42 | GPRC5C | GPRC5C Entrez, Source | G protein-coupled receptor, family C, group 5, member C | 8812 | -0.048 | 0.1066 | No |
| 43 | CREM | CREM Entrez, Source | cAMP responsive element modulator | 8985 | -0.051 | 0.0993 | No |
| 44 | LRRN3 | LRRN3 Entrez, Source | leucine rich repeat neuronal 3 | 9072 | -0.053 | 0.0987 | No |
| 45 | KITLG | KITLG Entrez, Source | KIT ligand | 9361 | -0.060 | 0.0836 | No |
| 46 | SYMPK | SYMPK Entrez, Source | symplekin | 9605 | -0.065 | 0.0724 | No |
| 47 | ACOX3 | ACOX3 Entrez, Source | acyl-Coenzyme A oxidase 3, pristanoyl | 10884 | -0.104 | -0.0123 | No |
| 48 | DDX17 | DDX17 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 | 11050 | -0.110 | -0.0127 | No |
| 49 | PIK3R1 | PIK3R1 Entrez, Source | phosphoinositide-3-kinase, regulatory subunit 1 (p85 alpha) | 11304 | -0.121 | -0.0185 | No |
| 50 | NTF5 | NTF5 Entrez, Source | neurotrophin 5 (neurotrophin 4/5) | 11527 | -0.130 | -0.0210 | No |
| 51 | SSBP3 | SSBP3 Entrez, Source | single stranded DNA binding protein 3 | 11675 | -0.137 | -0.0171 | No |
| 52 | IL1RN | IL1RN Entrez, Source | interleukin 1 receptor antagonist | 11709 | -0.139 | -0.0044 | No |
| 53 | DARS | DARS Entrez, Source | aspartyl-tRNA synthetase | 12016 | -0.158 | -0.0100 | No |
| 54 | FOXA3 | FOXA3 Entrez, Source | forkhead box A3 | 12080 | -0.163 | 0.0031 | No |
| 55 | SDC1 | SDC1 Entrez, Source | syndecan 1 | 12438 | -0.192 | -0.0028 | No |
| 56 | ZFR | ZFR Entrez, Source | zinc finger RNA binding protein | 12532 | -0.202 | 0.0124 | No |
| 57 | RUNX1 | RUNX1 Entrez, Source | runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) | 12547 | -0.204 | 0.0337 | No |
| 58 | SYNCRIP | SYNCRIP Entrez, Source | synaptotagmin binding, cytoplasmic RNA interacting protein | 12783 | -0.238 | 0.0421 | No |
