Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_24h.class.cls
#double_gel_8d_versus_double_gel_24h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in classdouble_gel_8d
GeneSetV$TBP_01
Enrichment Score (ES)0.49427524
Normalized Enrichment Score (NES)1.7839531
Nominal p-value0.0
FDR q-value0.031486373
FWER p-Value0.97
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$TBP_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FOSFOS
Entrez,  Source
v-fos FBJ murine osteosarcoma viral oncogene homolog31.6220.1090Yes
2COL1A2COL1A2
Entrez,  Source
collagen, type I, alpha 2121.2540.1929Yes
3SLC25A4SLC25A4
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4131.1950.2734Yes
4ACTA1ACTA1
Entrez,  Source
actin, alpha 1, skeletal muscle600.7620.3212Yes
5TRPM4TRPM4
Entrez,  Source
transient receptor potential cation channel, subfamily M, member 4740.7100.3680Yes
6P2RX5P2RX5
Entrez,  Source
purinergic receptor P2X, ligand-gated ion channel, 51750.5230.3957Yes
7SCHIP1SCHIP1
Entrez,  Source
schwannomin interacting protein 12170.4720.4244Yes
8EGR2EGR2
Entrez,  Source
early growth response 2 (Krox-20 homolog, Drosophila)3120.3900.4435Yes
9SLC3A1SLC3A1
Entrez,  Source
13730.3490.4625Yes
10FLI1FLI1
Entrez,  Source
Friend leukemia virus integration 17240.2310.4516Yes
11CKBCKB
Entrez,  Source
creatine kinase, brain7330.2290.4664Yes
12GABRB2GABRB2
Entrez,  Source
gamma-aminobutyric acid (GABA) A receptor, beta 29820.1850.4601Yes
13PRKAA2PRKAA2
Entrez,  Source
protein kinase, AMP-activated, alpha 2 catalytic subunit10050.1820.4707Yes
14GPSN2GPSN2
Entrez,  Source
glycoprotein, synaptic 210580.1750.4786Yes
15PPARGC1APPARGC1A
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, alpha10660.1740.4898Yes
16S100A4S100A4
Entrez,  Source
S100 calcium binding protein A412850.1520.4836Yes
17SH3GLB2SH3GLB2
Entrez,  Source
SH3-domain GRB2-like endophilin B213470.1470.4889Yes
18TEFTEF
Entrez,  Source
thyrotrophic embryonic factor14040.1430.4943Yes
19FXYD1FXYD1
Entrez,  Source
FXYD domain containing ion transport regulator 1 (phospholemman)17210.1220.4786No
20TRDNTRDN
Entrez,  Source
triadin17670.1180.4832No
21NR4A1NR4A1
Entrez,  Source
nuclear receptor subfamily 4, group A, member 117850.1180.4898No
22HDAC7AHDAC7A
Entrez,  Source
histone deacetylase 7A21330.1020.4705No
23NR0B2NR0B2
Entrez,  Source
nuclear receptor subfamily 0, group B, member 223300.0940.4620No
24HSPB3HSPB3
Entrez,  Source
heat shock 27kDa protein 323690.0930.4654No
25PRKAG1PRKAG1
Entrez,  Source
protein kinase, AMP-activated, gamma 1 non-catalytic subunit24020.0920.4691No
26HRCHRC
Entrez,  Source
histidine rich calcium binding protein24040.0920.4752No
27EHD1EHD1
Entrez,  Source
EH-domain containing 124290.0900.4795No
28BRAFBRAF
Entrez,  Source
v-raf murine sarcoma viral oncogene homolog B126050.0830.4719No
29SEMA4BSEMA4B
Entrez,  Source
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B26150.0830.4768No
30GRIK4GRIK4
Entrez,  Source
glutamate receptor, ionotropic, kainate 432540.0640.4329No
31DESDES
Entrez,  Source
desmin32600.0640.4368No
32GALNT1GALNT1
Entrez,  Source
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)33310.0620.4357No
33GIT1GIT1
Entrez,  Source
G protein-coupled receptor kinase interactor 134230.0600.4329No
34CRISP1CRISP1
Entrez,  Source
cysteine-rich secretory protein 137060.0520.4151No
35DNM2DNM2
Entrez,  Source
dynamin 237430.0510.4158No
36MAP2K5MAP2K5
Entrez,  Source
mitogen-activated protein kinase kinase 537620.0510.4179No
37ASB16ASB16
Entrez,  Source
ankyrin repeat and SOCS box-containing 1638210.0500.4168No
38LHX5LHX5
Entrez,  Source
LIM homeobox 538940.0470.4146No
39FGF21FGF21
Entrez,  Source
fibroblast growth factor 2139410.0460.4142No
40CDH20CDH20
Entrez,  Source
cadherin 20, type 239860.0450.4139No
41SSH3SSH3
Entrez,  Source
slingshot homolog 3 (Drosophila)41100.0420.4074No
42PTF1APTF1A
Entrez,  Source
pancreas specific transcription factor, 1a41390.0410.4081No
43EPHA7EPHA7
Entrez,  Source
EPH receptor A741560.0410.4097No
44ESRRGESRRG
Entrez,  Source
estrogen-related receptor gamma44020.0360.3936No
45POFUT1POFUT1
Entrez,  Source
protein O-fucosyltransferase 144800.0340.3901No
46TAX1BP3TAX1BP3
Entrez,  Source
Tax1 (human T-cell leukemia virus type I) binding protein 346140.0320.3821No
47THBS2THBS2
Entrez,  Source
thrombospondin 247380.0290.3748No
48CYP26B1CYP26B1
Entrez,  Source
cytochrome P450, family 26, subfamily B, polypeptide 148290.0270.3699No
49TSC1TSC1
Entrez,  Source
tuberous sclerosis 149920.0240.3593No
50MYH8MYH8
Entrez,  Source
myosin, heavy chain 8, skeletal muscle, perinatal51270.0220.3506No
51LGI1LGI1
Entrez,  Source
leucine-rich, glioma inactivated 151640.0210.3493No
52SULT2A1SULT2A1
Entrez,  Source
sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 151840.0210.3492No
53SLC2A4SLC2A4
Entrez,  Source
solute carrier family 2 (facilitated glucose transporter), member 452830.0190.3431No
54ABCC6ABCC6
Entrez,  Source
ATP-binding cassette, sub-family C (CFTR/MRP), member 653960.0170.3358No
55GPR153GPR153
Entrez,  Source
G protein-coupled receptor 15356200.0120.3198No
56ART5ART5
Entrez,  Source
ADP-ribosyltransferase 557690.0100.3093No
57ART3ART3
Entrez,  Source
ADP-ribosyltransferase 358670.0080.3024No
58HIST1H2BAHIST1H2BA
Entrez,  Source
histone cluster 1, H2ba60050.0050.2924No
59HIST1H2AAHIST1H2AA
Entrez,  Source
histone cluster 1, H2aa6291-0.0000.2709No
60POU4F1POU4F1
Entrez,  Source
POU domain, class 4, transcription factor 16349-0.0010.2667No
61NOGNOG
Entrez,  Source
noggin6567-0.0050.2506No
62HAND2HAND2
Entrez,  Source
heart and neural crest derivatives expressed 26680-0.0070.2426No
63PAX3PAX3
Entrez,  Source
paired box gene 3 (Waardenburg syndrome 1)6824-0.0090.2324No
64SLC35C2SLC35C2
Entrez,  Source
solute carrier family 35, member C26882-0.0100.2288No
65PNMA1PNMA1
Entrez,  Source
paraneoplastic antigen MA16990-0.0120.2215No
66DNAJA4DNAJA4
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily A, member 47050-0.0130.2180No
67MYOCDMYOCD
Entrez,  Source
myocardin7203-0.0160.2076No
68CHRDL1CHRDL1
Entrez,  Source
chordin-like 17218-0.0160.2076No
69AQP1AQP1
Entrez,  Source
aquaporin 1 (Colton blood group)7239-0.0170.2072No
70ITGA7ITGA7
Entrez,  Source
integrin, alpha 77298-0.0180.2040No
71ZFP36L1ZFP36L1
Entrez,  Source
zinc finger protein 36, C3H type-like 17346-0.0190.2017No
72NR0B1NR0B1
Entrez,  Source
nuclear receptor subfamily 0, group B, member 17399-0.0200.1991No
73AMPD1AMPD1
Entrez,  Source
adenosine monophosphate deaminase 1 (isoform M)8004-0.0310.1556No
74MEOX2MEOX2
Entrez,  Source
mesenchyme homeobox 28026-0.0320.1562No
75PLEC1PLEC1
Entrez,  Source
plectin 1, intermediate filament binding protein 500kDa8108-0.0340.1523No
76KPNA3KPNA3
Entrez,  Source
karyopherin alpha 3 (importin alpha 4)8218-0.0360.1465No
77GCGGCG
Entrez,  Source
glucagon8225-0.0360.1484No
78CLCN1CLCN1
Entrez,  Source
chloride channel 1, skeletal muscle (Thomsen disease, autosomal dominant)8253-0.0360.1489No
79CTCFCTCF
Entrez,  Source
CCCTC-binding factor (zinc finger protein)8374-0.0390.1424No
80RARARARA
Entrez,  Source
retinoic acid receptor, alpha8595-0.0430.1287No
81TCF1TCF1
Entrez,  Source
transcription factor 1, hepatic; LF-B1, hepatic nuclear factor (HNF1), albumin proximal factor8858-0.0490.1122No
82IFNB1IFNB1
Entrez,  Source
interferon, beta 1, fibroblast8907-0.0500.1120No
83HAPLN1HAPLN1
Entrez,  Source
hyaluronan and proteoglycan link protein 18916-0.0500.1147No
84PPP2R2APPP2R2A
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform8961-0.0510.1148No
85FGF5FGF5
Entrez,  Source
fibroblast growth factor 59095-0.0540.1084No
86IGF1IGF1
Entrez,  Source
insulin-like growth factor 1 (somatomedin C)9134-0.0550.1092No
87GRIN2BGRIN2B
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2B9200-0.0560.1081No
88NCOR1NCOR1
Entrez,  Source
nuclear receptor co-repressor 19668-0.0670.0773No
89TTC17TTC17
Entrez,  Source
tetratricopeptide repeat domain 179894-0.0740.0653No
90DMDDMD
Entrez,  Source
dystrophin (muscular dystrophy, Duchenne and Becker types)9896-0.0740.0701No
91NDRG2NDRG2
Entrez,  Source
NDRG family member 29944-0.0750.0716No
92MGAT3MGAT3
Entrez,  Source
mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase10191-0.0810.0585No
93MYST2MYST2
Entrez,  Source
MYST histone acetyltransferase 210762-0.0990.0222No
94COL10A1COL10A1
Entrez,  Source
collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia)10885-0.1040.0200No
95PACSIN3PACSIN3
Entrez,  Source
protein kinase C and casein kinase substrate in neurons 310908-0.1050.0254No
96SOX9SOX9
Entrez,  Source
SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal)11038-0.1090.0230No
97RPS19RPS19
Entrez,  Source
ribosomal protein S1911310-0.1210.0107No
98FHL2FHL2
Entrez,  Source
four and a half LIM domains 211359-0.1230.0153No
99LUC7LLUC7L
Entrez,  Source
LUC7-like (S. cerevisiae)11577-0.1320.0079No
100CSNK1ECSNK1E
Entrez,  Source
casein kinase 1, epsilon11711-0.1390.0072No
101NTF3NTF3
Entrez,  Source
neurotrophin 311818-0.1460.0090No
102TUBA4TUBA4
Entrez,  Source
tubulin, alpha 412345-0.183-0.0184No
103ITGB3BPITGB3BP
Entrez,  Source
integrin beta 3 binding protein (beta3-endonexin)12793-0.240-0.0361No
104SLC30A1SLC30A1
Entrez,  Source
solute carrier family 30 (zinc transporter), member 112795-0.240-0.0199No
105AGTAGT
Entrez,  Source
angiotensinogen (serpin peptidase inhibitor, clade A, member 8)13048-0.306-0.0184No
106MAT2AMAT2A
Entrez,  Source
methionine adenosyltransferase II, alpha13299-0.6010.0032No
Table: GSEA details [plain text format]



Fig 2: V$TBP_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$TBP_01: Random ES distribution   
Gene set null distribution of ES for V$TBP_01