Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | VEGF_MMMEC_6HRS_UP |
| Enrichment Score (ES) | 0.7651312 |
| Normalized Enrichment Score (NES) | 2.277909 |
| Nominal p-value | 0.0 |
| FDR q-value | 3.1095234E-4 |
| FWER p-Value | 0.0010 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 12 | 1.254 | 0.1651 | Yes |
| 2 | ANKRD1 | ANKRD1 Entrez, Source | ankyrin repeat domain 1 (cardiac muscle) | 56 | 0.784 | 0.2657 | Yes |
| 3 | MGP | MGP Entrez, Source | matrix Gla protein | 108 | 0.644 | 0.3471 | Yes |
| 4 | RGS5 | RGS5 Entrez, Source | regulator of G-protein signalling 5 | 125 | 0.616 | 0.4275 | Yes |
| 5 | AQP7 | AQP7 Entrez, Source | aquaporin 7 | 167 | 0.536 | 0.4954 | Yes |
| 6 | VCAM1 | VCAM1 Entrez, Source | vascular cell adhesion molecule 1 | 183 | 0.515 | 0.5624 | Yes |
| 7 | FBP1 | FBP1 Entrez, Source | fructose-1,6-bisphosphatase 1 | 203 | 0.484 | 0.6251 | Yes |
| 8 | BGN | BGN Entrez, Source | biglycan | 241 | 0.450 | 0.6818 | Yes |
| 9 | CCL2 | CCL2 Entrez, Source | chemokine (C-C motif) ligand 2 | 405 | 0.336 | 0.7141 | Yes |
| 10 | IGFBP3 | IGFBP3 Entrez, Source | insulin-like growth factor binding protein 3 | 533 | 0.274 | 0.7408 | Yes |
| 11 | SULT1E1 | SULT1E1 Entrez, Source | sulfotransferase family 1E, estrogen-preferring, member 1 | 909 | 0.194 | 0.7383 | Yes |
| 12 | DIRC2 | DIRC2 Entrez, Source | disrupted in renal carcinoma 2 | 926 | 0.191 | 0.7624 | Yes |
| 13 | FGFBP1 | FGFBP1 Entrez, Source | fibroblast growth factor binding protein 1 | 1178 | 0.163 | 0.7651 | Yes |
| 14 | BMP4 | BMP4 Entrez, Source | bone morphogenetic protein 4 | 1870 | 0.113 | 0.7282 | No |
| 15 | RHOB | RHOB Entrez, Source | ras homolog gene family, member B | 2072 | 0.105 | 0.7270 | No |
| 16 | SGCE | SGCE Entrez, Source | sarcoglycan, epsilon | 2274 | 0.096 | 0.7246 | No |
| 17 | ESR1 | ESR1 Entrez, Source | estrogen receptor 1 | 3399 | 0.060 | 0.6482 | No |
| 18 | SP3 | SP3 Entrez, Source | Sp3 transcription factor | 3514 | 0.057 | 0.6472 | No |
| 19 | TFPI2 | TFPI2 Entrez, Source | tissue factor pathway inhibitor 2 | 3591 | 0.055 | 0.6487 | No |
| 20 | SDC4 | SDC4 Entrez, Source | syndecan 4 (amphiglycan, ryudocan) | 3799 | 0.050 | 0.6398 | No |
| 21 | NID2 | NID2 Entrez, Source | nidogen 2 (osteonidogen) | 4025 | 0.044 | 0.6287 | No |
| 22 | PVALB | PVALB Entrez, Source | parvalbumin | 4338 | 0.037 | 0.6101 | No |
| 23 | CCL7 | CCL7 Entrez, Source | chemokine (C-C motif) ligand 7 | 4409 | 0.036 | 0.6096 | No |
| 24 | THY1 | THY1 Entrez, Source | Thy-1 cell surface antigen | 4478 | 0.034 | 0.6090 | No |
| 25 | HTR2B | HTR2B Entrez, Source | 5-hydroxytryptamine (serotonin) receptor 2B | 5010 | 0.024 | 0.5723 | No |
| 26 | ISL1 | ISL1 Entrez, Source | ISL1 transcription factor, LIM/homeodomain, (islet-1) | 5512 | 0.014 | 0.5365 | No |
| 27 | MMP2 | MMP2 Entrez, Source | matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) | 5540 | 0.014 | 0.5363 | No |
| 28 | GJA4 | GJA4 Entrez, Source | gap junction protein, alpha 4, 37kDa (connexin 37) | 5689 | 0.011 | 0.5267 | No |
| 29 | ADORA2B | ADORA2B Entrez, Source | adenosine A2b receptor | 5772 | 0.010 | 0.5218 | No |
| 30 | OXTR | OXTR Entrez, Source | oxytocin receptor | 5940 | 0.006 | 0.5101 | No |
| 31 | ELN | ELN Entrez, Source | elastin (supravalvular aortic stenosis, Williams-Beuren syndrome) | 7315 | -0.018 | 0.4093 | No |
| 32 | CSPG2 | CSPG2 Entrez, Source | chondroitin sulfate proteoglycan 2 (versican) | 7897 | -0.029 | 0.3695 | No |
| 33 | GSTT1 | GSTT1 Entrez, Source | glutathione S-transferase theta 1 | 7971 | -0.031 | 0.3680 | No |
| 34 | UNG | UNG Entrez, Source | uracil-DNA glycosylase | 9382 | -0.060 | 0.2700 | No |
| 35 | FAP | FAP Entrez, Source | fibroblast activation protein, alpha | 10470 | -0.089 | 0.2002 | No |
| 36 | SLC6A8 | SLC6A8 Entrez, Source | solute carrier family 6 (neurotransmitter transporter, creatine), member 8 | 11242 | -0.118 | 0.1578 | No |
