Details for gene set VEGF_MMMEC_ALL

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_24h_repos
Upregulated in class	double_gel_8d
GeneSet	VEGF_MMMEC_ALL_UP
Enrichment Score (ES)	0.6071244
Normalized Enrichment Score (NES)	2.040503
Nominal p-value	0.0
FDR q-value	0.0029559692
FWER p-Value	0.069

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL1A2	COL1A2 Entrez, Source	collagen, type I, alpha 2	12	1.254	0.1047	Yes
2	CD9	CD9 Entrez, Source	CD9 molecule	41	0.871	0.1760	Yes
3	ANKRD1	ANKRD1 Entrez, Source	ankyrin repeat domain 1 (cardiac muscle)	56	0.784	0.2410	Yes
4	MGP	MGP Entrez, Source	matrix Gla protein	108	0.644	0.2914	Yes
5	RGS5	RGS5 Entrez, Source	regulator of G-protein signalling 5	125	0.616	0.3421	Yes
6	AQP7	AQP7 Entrez, Source	aquaporin 7	167	0.536	0.3842	Yes
7	VCAM1	VCAM1 Entrez, Source	vascular cell adhesion molecule 1	183	0.515	0.4264	Yes
8	FBP1	FBP1 Entrez, Source	fructose-1,6-bisphosphatase 1	203	0.484	0.4658	Yes
9	BGN	BGN Entrez, Source	biglycan	241	0.450	0.5009	Yes
10	CCL2	CCL2 Entrez, Source	chemokine (C-C motif) ligand 2	405	0.336	0.5169	Yes
11	CXCL1	CXCL1 Entrez, Source	chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)	474	0.294	0.5366	Yes
12	IGFBP3	IGFBP3 Entrez, Source	insulin-like growth factor binding protein 3	533	0.274	0.5553	Yes
13	FOXO1A	FOXO1A Entrez, Source	forkhead box O1A (rhabdomyosarcoma)	656	0.244	0.5666	Yes
14	IGF2BP3	IGF2BP3 Entrez, Source	insulin-like growth factor 2 mRNA binding protein 3	746	0.228	0.5791	Yes
15	SULT1E1	SULT1E1 Entrez, Source	sulfotransferase family 1E, estrogen-preferring, member 1	909	0.194	0.5833	Yes
16	DIRC2	DIRC2 Entrez, Source	disrupted in renal carcinoma 2	926	0.191	0.5982	Yes
17	HEXA	HEXA Entrez, Source	hexosaminidase A (alpha polypeptide)	1133	0.167	0.5967	Yes
18	FGFBP1	FGFBP1 Entrez, Source	fibroblast growth factor binding protein 1	1178	0.163	0.6071	Yes
19	HEMGN	HEMGN Entrez, Source	hemogen	1555	0.131	0.5898	No
20	NR4A1	NR4A1 Entrez, Source	nuclear receptor subfamily 4, group A, member 1	1785	0.118	0.5825	No
21	BMP4	BMP4 Entrez, Source	bone morphogenetic protein 4	1870	0.113	0.5857	No
22	TIE1	TIE1 Entrez, Source	tyrosine kinase with immunoglobulin-like and EGF-like domains 1	2041	0.106	0.5818	No
23	RHOB	RHOB Entrez, Source	ras homolog gene family, member B	2072	0.105	0.5884	No
24	SGCE	SGCE Entrez, Source	sarcoglycan, epsilon	2274	0.096	0.5814	No
25	VWF	VWF Entrez, Source	von Willebrand factor	2400	0.092	0.5797	No
26	GALNT1	GALNT1 Entrez, Source	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	3331	0.062	0.5148	No
27	BMP6	BMP6 Entrez, Source	bone morphogenetic protein 6	3348	0.061	0.5188	No
28	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	3378	0.061	0.5217	No
29	ESR1	ESR1 Entrez, Source	estrogen receptor 1	3399	0.060	0.5253	No
30	SP3	SP3 Entrez, Source	Sp3 transcription factor	3514	0.057	0.5215	No
31	TFPI2	TFPI2 Entrez, Source	tissue factor pathway inhibitor 2	3591	0.055	0.5204	No
32	PIR	PIR Entrez, Source	pirin (iron-binding nuclear protein)	3758	0.051	0.5122	No
33	UBD	UBD Entrez, Source	ubiquitin D	3783	0.050	0.5146	No
34	SDC4	SDC4 Entrez, Source	syndecan 4 (amphiglycan, ryudocan)	3799	0.050	0.5177	No
35	HCLS1	HCLS1 Entrez, Source	hematopoietic cell-specific Lyn substrate 1	3872	0.048	0.5164	No
36	NID2	NID2 Entrez, Source	nidogen 2 (osteonidogen)	4025	0.044	0.5086	No
37	PVALB	PVALB Entrez, Source	parvalbumin	4338	0.037	0.4882	No
38	HSD11B2	HSD11B2 Entrez, Source	hydroxysteroid (11-beta) dehydrogenase 2	4357	0.037	0.4899	No
39	CCL7	CCL7 Entrez, Source	chemokine (C-C motif) ligand 7	4409	0.036	0.4891	No
40	KDR	KDR Entrez, Source	kinase insert domain receptor (a type III receptor tyrosine kinase)	4442	0.035	0.4896	No
41	CEACAM1	CEACAM1 Entrez, Source	carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)	4467	0.035	0.4907	No
42	THY1	THY1 Entrez, Source	Thy-1 cell surface antigen	4478	0.034	0.4929	No
43	MMP10	MMP10 Entrez, Source	matrix metallopeptidase 10 (stromelysin 2)	4938	0.025	0.4604	No
44	HTR2B	HTR2B Entrez, Source	5-hydroxytryptamine (serotonin) receptor 2B	5010	0.024	0.4571	No
45	ISL1	ISL1 Entrez, Source	ISL1 transcription factor, LIM/homeodomain, (islet-1)	5512	0.014	0.4205	No
46	MMP2	MMP2 Entrez, Source	matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	5540	0.014	0.4197	No
47	GJA4	GJA4 Entrez, Source	gap junction protein, alpha 4, 37kDa (connexin 37)	5689	0.011	0.4095	No
48	ADORA2B	ADORA2B Entrez, Source	adenosine A2b receptor	5772	0.010	0.4041	No
49	OXTR	OXTR Entrez, Source	oxytocin receptor	5940	0.006	0.3920	No
50	ADD2	ADD2 Entrez, Source	adducin 2 (beta)	6720	-0.008	0.3340	No
51	DYNLL1	DYNLL1 Entrez, Source	dynein, light chain, LC8-type 1	6888	-0.010	0.3223	No
52	PDE4B	PDE4B Entrez, Source	phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila)	7179	-0.015	0.3017	No
53	ELN	ELN Entrez, Source	elastin (supravalvular aortic stenosis, Williams-Beuren syndrome)	7315	-0.018	0.2931	No
54	PRKCI	PRKCI Entrez, Source	protein kinase C, iota	7723	-0.026	0.2646	No
55	CSPG2	CSPG2 Entrez, Source	chondroitin sulfate proteoglycan 2 (versican)	7897	-0.029	0.2540	No
56	GSTT1	GSTT1 Entrez, Source	glutathione S-transferase theta 1	7971	-0.031	0.2511	No
57	NAGK	NAGK Entrez, Source	N-acetylglucosamine kinase	8172	-0.035	0.2389	No
58	PGF	PGF Entrez, Source	placental growth factor, vascular endothelial growth factor-related protein	8718	-0.046	0.2017	No
59	ANGPT2	ANGPT2 Entrez, Source	angiopoietin 2	8929	-0.050	0.1901	No
60	UNG	UNG Entrez, Source	uracil-DNA glycosylase	9382	-0.060	0.1611	No
61	FAP	FAP Entrez, Source	fibroblast activation protein, alpha	10470	-0.089	0.0868	No
62	RANGAP1	RANGAP1 Entrez, Source	Ran GTPase activating protein 1	10704	-0.097	0.0774	No
63	NDUFA1	NDUFA1 Entrez, Source	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa	10713	-0.098	0.0850	No
64	MRPL19	MRPL19 Entrez, Source	mitochondrial ribosomal protein L19	10771	-0.100	0.0891	No
65	EMR1	EMR1 Entrez, Source	egf-like module containing, mucin-like, hormone receptor-like 1	10780	-0.100	0.0970	No
66	SLC6A8	SLC6A8 Entrez, Source	solute carrier family 6 (neurotransmitter transporter, creatine), member 8	11242	-0.118	0.0721	No
67	RBX1	RBX1 Entrez, Source	ring-box 1	11606	-0.134	0.0560	No
68	TRIM23	TRIM23 Entrez, Source	tripartite motif-containing 23	12278	-0.177	0.0204	No
69	RALA	RALA Entrez, Source	v-ral simian leukemia viral oncogene homolog A (ras related)	12488	-0.197	0.0213	No
70	GGH	GGH Entrez, Source	gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)	12617	-0.213	0.0296	No
71	PIM1	PIM1 Entrez, Source	pim-1 oncogene	13014	-0.296	0.0247	No