Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | WALKER_MM_SNP_DIFF |
| Enrichment Score (ES) | 0.5966083 |
| Normalized Enrichment Score (NES) | 1.7160457 |
| Nominal p-value | 0.0036630037 |
| FDR q-value | 0.050226357 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | MAF | MAF Entrez, Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | 31 | 0.935 | 0.2352 | Yes |
| 2 | HMGCS2 | HMGCS2 Entrez, Source | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) | 173 | 0.525 | 0.3580 | Yes |
| 3 | PRNP | PRNP Entrez, Source | prion protein (p27-30) (Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia) | 290 | 0.408 | 0.4530 | Yes |
| 4 | BMP2 | BMP2 Entrez, Source | bone morphogenetic protein 2 | 509 | 0.282 | 0.5082 | Yes |
| 5 | ASAH1 | ASAH1 Entrez, Source | N-acylsphingosine amidohydrolase (acid ceramidase) 1 | 722 | 0.231 | 0.5509 | Yes |
| 6 | SEPP1 | SEPP1 Entrez, Source | selenoprotein P, plasma, 1 | 823 | 0.209 | 0.5966 | Yes |
| 7 | HERPUD1 | HERPUD1 Entrez, Source | homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 | 1861 | 0.114 | 0.5476 | No |
| 8 | HMGB1 | HMGB1 Entrez, Source | high-mobility group box 1 | 2337 | 0.094 | 0.5358 | No |
| 9 | TM9SF2 | TM9SF2 Entrez, Source | transmembrane 9 superfamily member 2 | 2511 | 0.087 | 0.5450 | No |
| 10 | GABARAPL2 | GABARAPL2 Entrez, Source | GABA(A) receptor-associated protein-like 2 | 2693 | 0.081 | 0.5518 | No |
| 11 | MAP1LC3B | MAP1LC3B Entrez, Source | microtubule-associated protein 1 light chain 3 beta | 2840 | 0.076 | 0.5602 | No |
| 12 | TPST2 | TPST2 Entrez, Source | tyrosylprotein sulfotransferase 2 | 3182 | 0.066 | 0.5514 | No |
| 13 | ESR1 | ESR1 Entrez, Source | estrogen receptor 1 | 3399 | 0.060 | 0.5505 | No |
| 14 | ACTN1 | ACTN1 Entrez, Source | actinin, alpha 1 | 3460 | 0.059 | 0.5609 | No |
| 15 | ACADM | ACADM Entrez, Source | acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain | 3794 | 0.050 | 0.5486 | No |
| 16 | GFRA2 | GFRA2 Entrez, Source | GDNF family receptor alpha 2 | 4087 | 0.043 | 0.5375 | No |
| 17 | DSTN | DSTN Entrez, Source | destrin (actin depolymerizing factor) | 4198 | 0.040 | 0.5393 | No |
| 18 | LAMP1 | LAMP1 Entrez, Source | lysosomal-associated membrane protein 1 | 4337 | 0.037 | 0.5383 | No |
| 19 | SENP3 | SENP3 Entrez, Source | SUMO1/sentrin/SMT3 specific peptidase 3 | 5274 | 0.019 | 0.4729 | No |
| 20 | PTP4A1 | PTP4A1 Entrez, Source | protein tyrosine phosphatase type IVA, member 1 | 5658 | 0.012 | 0.4471 | No |
| 21 | ZFP36L1 | ZFP36L1 Entrez, Source | zinc finger protein 36, C3H type-like 1 | 7346 | -0.019 | 0.3251 | No |
| 22 | KCND3 | KCND3 Entrez, Source | potassium voltage-gated channel, Shal-related subfamily, member 3 | 7872 | -0.029 | 0.2929 | No |
| 23 | GABARAP | GABARAP Entrez, Source | GABA(A) receptor-associated protein | 7908 | -0.029 | 0.2978 | No |
| 24 | TPT1 | TPT1 Entrez, Source | tumor protein, translationally-controlled 1 | 7942 | -0.030 | 0.3029 | No |
| 25 | CNGB1 | CNGB1 Entrez, Source | cyclic nucleotide gated channel beta 1 | 8730 | -0.046 | 0.2555 | No |
| 26 | WDR1 | WDR1 Entrez, Source | WD repeat domain 1 | 8991 | -0.052 | 0.2491 | No |
| 27 | SAP18 | SAP18 Entrez, Source | Sin3A-associated protein, 18kDa | 9025 | -0.052 | 0.2599 | No |
| 28 | GTF3A | GTF3A Entrez, Source | general transcription factor IIIA | 10103 | -0.079 | 0.1991 | No |
| 29 | RPL13 | RPL13 Entrez, Source | ribosomal protein L13 | 10259 | -0.083 | 0.2086 | No |
| 30 | TOM1 | TOM1 Entrez, Source | target of myb1 (chicken) | 10506 | -0.090 | 0.2130 | No |
