Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
Upregulated in class | double_gel_8d |
GeneSet | YATGNWAAT_V$OCT_C |
Enrichment Score (ES) | 0.455344 |
Normalized Enrichment Score (NES) | 1.712001 |
Nominal p-value | 0.0 |
FDR q-value | 0.051638614 |
FWER p-Value | 1.0 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | MAF | MAF Entrez,  Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | 31 | 0.935 | 0.0560 | Yes |
2 | PFKFB1 | PFKFB1 Entrez,  Source | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 | 47 | 0.829 | 0.1065 | Yes |
3 | LPL | LPL Entrez,  Source | lipoprotein lipase | 107 | 0.646 | 0.1424 | Yes |
4 | SLC24A3 | SLC24A3 Entrez,  Source | solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 | 151 | 0.563 | 0.1743 | Yes |
5 | ALDH1A1 | ALDH1A1 Entrez,  Source | aldehyde dehydrogenase 1 family, member A1 | 185 | 0.510 | 0.2036 | Yes |
6 | EGR2 | EGR2 Entrez,  Source | early growth response 2 (Krox-20 homolog, Drosophila) | 312 | 0.390 | 0.2183 | Yes |
7 | CCND1 | CCND1 Entrez,  Source | cyclin D1 | 391 | 0.341 | 0.2337 | Yes |
8 | GPC4 | GPC4 Entrez,  Source | glypican 4 | 577 | 0.262 | 0.2360 | Yes |
9 | NFIA | NFIA Entrez,  Source | nuclear factor I/A | 581 | 0.262 | 0.2521 | Yes |
10 | PPP2R3A | PPP2R3A Entrez,  Source | protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha | 603 | 0.257 | 0.2665 | Yes |
11 | LPHN1 | LPHN1 Entrez,  Source | latrophilin 1 | 667 | 0.242 | 0.2769 | Yes |
12 | SLC10A2 | SLC10A2 Entrez,  Source | solute carrier family 10 (sodium/bile acid cotransporter family), member 2 | 671 | 0.242 | 0.2917 | Yes |
13 | RAB3C | RAB3C Entrez,  Source | RAB3C, member RAS oncogene family | 739 | 0.229 | 0.3009 | Yes |
14 | CUTL1 | CUTL1 Entrez,  Source | cut-like 1, CCAAT displacement protein (Drosophila) | 807 | 0.212 | 0.3091 | Yes |
15 | LMO4 | LMO4 Entrez,  Source | LIM domain only 4 | 824 | 0.209 | 0.3209 | Yes |
16 | NGFRAP1 | NGFRAP1 Entrez,  Source | nerve growth factor receptor (TNFRSF16) associated protein 1 | 830 | 0.208 | 0.3335 | Yes |
17 | FOXP1 | FOXP1 Entrez,  Source | forkhead box P1 | 833 | 0.207 | 0.3462 | Yes |
18 | MAP1B | MAP1B Entrez,  Source | microtubule-associated protein 1B | 854 | 0.203 | 0.3574 | Yes |
19 | MRAS | MRAS Entrez,  Source | muscle RAS oncogene homolog | 863 | 0.201 | 0.3694 | Yes |
20 | ADORA1 | ADORA1 Entrez,  Source | adenosine A1 receptor | 901 | 0.195 | 0.3787 | Yes |
21 | ACTG2 | ACTG2 Entrez,  Source | actin, gamma 2, smooth muscle, enteric | 919 | 0.192 | 0.3895 | Yes |
22 | IGSF4 | IGSF4 Entrez,  Source | immunoglobulin superfamily, member 4 | 932 | 0.190 | 0.4004 | Yes |
23 | PITX2 | PITX2 Entrez,  Source | paired-like homeodomain transcription factor 2 | 1047 | 0.177 | 0.4028 | Yes |
24 | CYR61 | CYR61 Entrez,  Source | cysteine-rich, angiogenic inducer, 61 | 1062 | 0.175 | 0.4126 | Yes |
25 | DPYSL3 | DPYSL3 Entrez,  Source | dihydropyrimidinase-like 3 | 1163 | 0.164 | 0.4153 | Yes |
26 | FGF12 | FGF12 Entrez,  Source | fibroblast growth factor 12 | 1334 | 0.148 | 0.4117 | Yes |
27 | POLM | POLM Entrez,  Source | polymerase (DNA directed), mu | 1341 | 0.148 | 0.4204 | Yes |
28 | ZFHX1B | ZFHX1B Entrez,  Source | zinc finger homeobox 1b | 1427 | 0.140 | 0.4227 | Yes |
29 | SCRN1 | SCRN1 Entrez,  Source | secernin 1 | 1507 | 0.134 | 0.4251 | Yes |
30 | NUDT3 | NUDT3 Entrez,  Source | nudix (nucleoside diphosphate linked moiety X)-type motif 3 | 1587 | 0.129 | 0.4272 | Yes |
31 | FKRP | FKRP Entrez,  Source | fukutin related protein | 1635 | 0.126 | 0.4315 | Yes |
32 | RARB | RARB Entrez,  Source | retinoic acid receptor, beta | 1690 | 0.123 | 0.4351 | Yes |
33 | TRDN | TRDN Entrez,  Source | triadin | 1767 | 0.118 | 0.4367 | Yes |
34 | NUDT6 | NUDT6 Entrez,  Source | nudix (nucleoside diphosphate linked moiety X)-type motif 6 | 1921 | 0.111 | 0.4320 | Yes |
35 | CACNG2 | CACNG2 Entrez,  Source | calcium channel, voltage-dependent, gamma subunit 2 | 1930 | 0.110 | 0.4383 | Yes |
36 | RNASE4 | RNASE4 Entrez,  Source | ribonuclease, RNase A family, 4 | 2064 | 0.105 | 0.4347 | Yes |
37 | RHOB | RHOB Entrez,  Source | ras homolog gene family, member B | 2072 | 0.105 | 0.4408 | Yes |
38 | TAS2R7 | TAS2R7 Entrez,  Source | taste receptor, type 2, member 7 | 2082 | 0.104 | 0.4466 | Yes |
39 | TBXAS1 | TBXAS1 Entrez,  Source | thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A) | 2089 | 0.104 | 0.4526 | Yes |
40 | POU1F1 | POU1F1 Entrez,  Source | POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1) | 2138 | 0.102 | 0.4553 | Yes |
41 | CSF3 | CSF3 Entrez,  Source | colony stimulating factor 3 (granulocyte) | 2306 | 0.095 | 0.4486 | No |
42 | SFRP1 | SFRP1 Entrez,  Source | secreted frizzled-related protein 1 | 2327 | 0.094 | 0.4530 | No |
43 | EGLN2 | EGLN2 Entrez,  Source | egl nine homolog 2 (C. elegans) | 2444 | 0.090 | 0.4498 | No |
44 | FZD4 | FZD4 Entrez,  Source | frizzled homolog 4 (Drosophila) | 2528 | 0.087 | 0.4489 | No |
45 | ITPR3 | ITPR3 Entrez,  Source | inositol 1,4,5-triphosphate receptor, type 3 | 2561 | 0.085 | 0.4518 | No |
46 | ING1 | ING1 Entrez,  Source | inhibitor of growth family, member 1 | 2587 | 0.084 | 0.4551 | No |
47 | OTX2 | OTX2 Entrez,  Source | orthodenticle homolog 2 (Drosophila) | 2831 | 0.076 | 0.4414 | No |
48 | GNB3 | GNB3 Entrez,  Source | guanine nucleotide binding protein (G protein), beta polypeptide 3 | 2846 | 0.076 | 0.4451 | No |
49 | LMO3 | LMO3 Entrez,  Source | LIM domain only 3 (rhombotin-like 2) | 3037 | 0.070 | 0.4351 | No |
50 | ERG | ERG Entrez,  Source | v-ets erythroblastosis virus E26 oncogene homolog (avian) | 3040 | 0.070 | 0.4393 | No |
51 | SYT1 | SYT1 Entrez,  Source | synaptotagmin I | 3045 | 0.070 | 0.4434 | No |
52 | GRIN3A | GRIN3A Entrez,  Source | glutamate receptor, ionotropic, N-methyl-D-aspartate 3A | 3216 | 0.065 | 0.4345 | No |
53 | SFRP2 | SFRP2 Entrez,  Source | secreted frizzled-related protein 2 | 3247 | 0.064 | 0.4363 | No |
54 | ATP1B2 | ATP1B2 Entrez,  Source | ATPase, Na+/K+ transporting, beta 2 polypeptide | 3398 | 0.060 | 0.4287 | No |
55 | POU2F3 | POU2F3 Entrez,  Source | POU domain, class 2, transcription factor 3 | 3508 | 0.057 | 0.4240 | No |
56 | FGF20 | FGF20 Entrez,  Source | fibroblast growth factor 20 | 3530 | 0.057 | 0.4259 | No |
57 | CRISP1 | CRISP1 Entrez,  Source | cysteine-rich secretory protein 1 | 3706 | 0.052 | 0.4159 | No |
58 | ALDH1A2 | ALDH1A2 Entrez,  Source | aldehyde dehydrogenase 1 family, member A2 | 3710 | 0.052 | 0.4189 | No |
59 | POU3F4 | POU3F4 Entrez,  Source | POU domain, class 3, transcription factor 4 | 3843 | 0.049 | 0.4119 | No |
60 | KCNIP4 | KCNIP4 Entrez,  Source | Kv channel interacting protein 4 | 3962 | 0.045 | 0.4058 | No |
61 | PHC2 | PHC2 Entrez,  Source | polyhomeotic homolog 2 (Drosophila) | 3972 | 0.045 | 0.4080 | No |
62 | SH3GL3 | SH3GL3 Entrez,  Source | SH3-domain GRB2-like 3 | 4015 | 0.044 | 0.4075 | No |
63 | HPCAL4 | HPCAL4 Entrez,  Source | hippocalcin like 4 | 4243 | 0.039 | 0.3927 | No |
64 | GBX2 | GBX2 Entrez,  Source | gastrulation brain homeobox 2 | 4453 | 0.035 | 0.3791 | No |
65 | FZD2 | FZD2 Entrez,  Source | frizzled homolog 2 (Drosophila) | 4530 | 0.033 | 0.3754 | No |
66 | SLC6A15 | SLC6A15 Entrez,  Source | solute carrier family 6, member 15 | 4739 | 0.029 | 0.3615 | No |
67 | NR4A3 | NR4A3 Entrez,  Source | nuclear receptor subfamily 4, group A, member 3 | 4753 | 0.029 | 0.3623 | No |
68 | ARHGAP4 | ARHGAP4 Entrez,  Source | Rho GTPase activating protein 4 | 4793 | 0.028 | 0.3611 | No |
69 | RAB26 | RAB26 Entrez,  Source | RAB26, member RAS oncogene family | 4823 | 0.028 | 0.3606 | No |
70 | PLCB2 | PLCB2 Entrez,  Source | phospholipase C, beta 2 | 4867 | 0.027 | 0.3590 | No |
71 | TEC | TEC Entrez,  Source | tec protein tyrosine kinase | 4933 | 0.025 | 0.3556 | No |
72 | THRA | THRA Entrez,  Source | thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) | 4984 | 0.024 | 0.3534 | No |
73 | TSC1 | TSC1 Entrez,  Source | tuberous sclerosis 1 | 4992 | 0.024 | 0.3544 | No |
74 | ACBD4 | ACBD4 Entrez,  Source | acyl-Coenzyme A binding domain containing 4 | 5190 | 0.020 | 0.3407 | No |
75 | DLX1 | DLX1 Entrez,  Source | distal-less homeobox 1 | 5243 | 0.020 | 0.3380 | No |
76 | NOS1 | NOS1 Entrez,  Source | nitric oxide synthase 1 (neuronal) | 5282 | 0.019 | 0.3363 | No |
77 | JUND | JUND Entrez,  Source | jun D proto-oncogene | 5289 | 0.019 | 0.3370 | No |
78 | DGKG | DGKG Entrez,  Source | diacylglycerol kinase, gamma 90kDa | 5313 | 0.019 | 0.3364 | No |
79 | COL23A1 | COL23A1 Entrez,  Source | collagen, type XXIII, alpha 1 | 5329 | 0.018 | 0.3364 | No |
80 | GPR4 | GPR4 Entrez,  Source | G protein-coupled receptor 4 | 5412 | 0.016 | 0.3312 | No |
81 | NEUROG1 | NEUROG1 Entrez,  Source | neurogenin 1 | 5488 | 0.015 | 0.3265 | No |
82 | ISL1 | ISL1 Entrez,  Source | ISL1 transcription factor, LIM/homeodomain, (islet-1) | 5512 | 0.014 | 0.3256 | No |
83 | TMEM24 | TMEM24 Entrez,  Source | transmembrane protein 24 | 5591 | 0.013 | 0.3205 | No |
84 | NRXN3 | NRXN3 Entrez,  Source | neurexin 3 | 5770 | 0.010 | 0.3076 | No |
85 | CNOT2 | CNOT2 Entrez,  Source | CCR4-NOT transcription complex, subunit 2 | 5786 | 0.009 | 0.3071 | No |
86 | CELSR2 | CELSR2 Entrez,  Source | cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila) | 5849 | 0.008 | 0.3029 | No |
87 | CD79B | CD79B Entrez,  Source | CD79b molecule, immunoglobulin-associated beta | 5871 | 0.008 | 0.3018 | No |
88 | YWHAB | YWHAB Entrez,  Source | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide | 6058 | 0.004 | 0.2879 | No |
89 | LRRN1 | LRRN1 Entrez,  Source | leucine rich repeat neuronal 1 | 6069 | 0.004 | 0.2874 | No |
90 | KCNN3 | KCNN3 Entrez,  Source | potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 | 6198 | 0.001 | 0.2778 | No |
91 | PCYT1B | PCYT1B Entrez,  Source | phosphate cytidylyltransferase 1, choline, beta | 6229 | 0.001 | 0.2756 | No |
92 | SLC17A7 | SLC17A7 Entrez,  Source | solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 | 6323 | -0.000 | 0.2685 | No |
93 | TCF4 | TCF4 Entrez,  Source | transcription factor 4 | 6338 | -0.001 | 0.2675 | No |
94 | BACE2 | BACE2 Entrez,  Source | beta-site APP-cleaving enzyme 2 | 6423 | -0.002 | 0.2613 | No |
95 | TNNI1 | TNNI1 Entrez,  Source | troponin I type 1 (skeletal, slow) | 6476 | -0.003 | 0.2575 | No |
96 | IL17F | IL17F Entrez,  Source | interleukin 17F | 6554 | -0.005 | 0.2520 | No |
97 | ANK3 | ANK3 Entrez,  Source | ankyrin 3, node of Ranvier (ankyrin G) | 6582 | -0.005 | 0.2503 | No |
98 | ATP6V0C | ATP6V0C Entrez,  Source | ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c | 6588 | -0.005 | 0.2502 | No |
99 | NRXN1 | NRXN1 Entrez,  Source | neurexin 1 | 6602 | -0.006 | 0.2496 | No |
100 | PRRX1 | PRRX1 Entrez,  Source | paired related homeobox 1 | 6636 | -0.006 | 0.2475 | No |
101 | PANK4 | PANK4 Entrez,  Source | pantothenate kinase 4 | 6748 | -0.008 | 0.2396 | No |
102 | NRAS | NRAS Entrez,  Source | neuroblastoma RAS viral (v-ras) oncogene homolog | 6918 | -0.011 | 0.2274 | No |
103 | SFRS15 | SFRS15 Entrez,  Source | splicing factor, arginine/serine-rich 15 | 6931 | -0.011 | 0.2272 | No |
104 | SEMA6C | SEMA6C Entrez,  Source | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C | 6955 | -0.011 | 0.2262 | No |
105 | DLL1 | DLL1 Entrez,  Source | delta-like 1 (Drosophila) | 7008 | -0.012 | 0.2230 | No |
106 | TOP1 | TOP1 Entrez,  Source | topoisomerase (DNA) I | 7017 | -0.013 | 0.2232 | No |
107 | DCN | DCN Entrez,  Source | decorin | 7217 | -0.016 | 0.2091 | No |
108 | GRID2 | GRID2 Entrez,  Source | glutamate receptor, ionotropic, delta 2 | 7487 | -0.021 | 0.1901 | No |
109 | GDNF | GDNF Entrez,  Source | glial cell derived neurotrophic factor | 7663 | -0.025 | 0.1784 | No |
110 | PAX6 | PAX6 Entrez,  Source | paired box gene 6 (aniridia, keratitis) | 7732 | -0.026 | 0.1748 | No |
111 | GCM1 | GCM1 Entrez,  Source | glial cells missing homolog 1 (Drosophila) | 7750 | -0.026 | 0.1752 | No |
112 | DLGAP4 | DLGAP4 Entrez,  Source | discs, large (Drosophila) homolog-associated protein 4 | 7775 | -0.027 | 0.1750 | No |
113 | ALK | ALK Entrez,  Source | anaplastic lymphoma kinase (Ki-1) | 7870 | -0.029 | 0.1697 | No |
114 | DLL3 | DLL3 Entrez,  Source | delta-like 3 (Drosophila) | 7929 | -0.030 | 0.1671 | No |
115 | TCF2 | TCF2 Entrez,  Source | transcription factor 2, hepatic; LF-B3; variant hepatic nuclear factor | 7953 | -0.030 | 0.1673 | No |
116 | XYLT2 | XYLT2 Entrez,  Source | xylosyltransferase II | 7962 | -0.030 | 0.1686 | No |
117 | DSCR1 | DSCR1 Entrez,  Source | Down syndrome critical region gene 1 | 7972 | -0.031 | 0.1698 | No |
118 | SLC18A3 | SLC18A3 Entrez,  Source | solute carrier family 18 (vesicular acetylcholine), member 3 | 7984 | -0.031 | 0.1709 | No |
119 | ESRRA | ESRRA Entrez,  Source | estrogen-related receptor alpha | 8092 | -0.033 | 0.1649 | No |
120 | GPR85 | GPR85 Entrez,  Source | G protein-coupled receptor 85 | 8109 | -0.034 | 0.1658 | No |
121 | CDK2 | CDK2 Entrez,  Source | cyclin-dependent kinase 2 | 8169 | -0.035 | 0.1635 | No |
122 | RAB5A | RAB5A Entrez,  Source | RAB5A, member RAS oncogene family | 8227 | -0.036 | 0.1614 | No |
123 | AMBN | AMBN Entrez,  Source | ameloblastin (enamel matrix protein) | 8671 | -0.045 | 0.1306 | No |
124 | NXPH1 | NXPH1 Entrez,  Source | neurexophilin 1 | 8833 | -0.049 | 0.1214 | No |
125 | ADORA2A | ADORA2A Entrez,  Source | adenosine A2a receptor | 8894 | -0.050 | 0.1200 | No |
126 | H3F3B | H3F3B Entrez,  Source | H3 histone, family 3B (H3.3B) | 9390 | -0.060 | 0.0862 | No |
127 | PCDH8 | PCDH8 Entrez,  Source | protocadherin 8 | 9427 | -0.061 | 0.0873 | No |
128 | SYNPR | SYNPR Entrez,  Source | synaptoporin | 9740 | -0.069 | 0.0679 | No |
129 | AKT2 | AKT2 Entrez,  Source | v-akt murine thymoma viral oncogene homolog 2 | 9889 | -0.073 | 0.0613 | No |
130 | CRYZL1 | CRYZL1 Entrez,  Source | crystallin, zeta (quinone reductase)-like 1 | 10057 | -0.078 | 0.0535 | No |
131 | LHX3 | LHX3 Entrez,  Source | LIM homeobox 3 | 10087 | -0.079 | 0.0562 | No |
132 | LYN | LYN Entrez,  Source | v-yes-1 Yamaguchi sarcoma viral related oncogene homolog | 10258 | -0.083 | 0.0485 | No |
133 | MID1 | MID1 Entrez,  Source | midline 1 (Opitz/BBB syndrome) | 10356 | -0.086 | 0.0466 | No |
134 | REST | REST Entrez,  Source | RE1-silencing transcription factor | 10648 | -0.095 | 0.0305 | No |
135 | MTUS1 | MTUS1 Entrez,  Source | mitochondrial tumor suppressor 1 | 10665 | -0.096 | 0.0352 | No |
136 | ITSN1 | ITSN1 Entrez,  Source | intersectin 1 (SH3 domain protein) | 10914 | -0.105 | 0.0230 | No |
137 | ADM | ADM Entrez,  Source | adrenomedullin | 11063 | -0.110 | 0.0187 | No |
138 | ID2 | ID2 Entrez,  Source | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | 11229 | -0.117 | 0.0135 | No |
139 | TSNAX | TSNAX Entrez,  Source | translin-associated factor X | 11254 | -0.118 | 0.0190 | No |
140 | TAS2R13 | TAS2R13 Entrez,  Source | taste receptor, type 2, member 13 | 11390 | -0.124 | 0.0165 | No |
141 | DNAH7 | DNAH7 Entrez,  Source | dynein, axonemal, heavy chain 7 | 11659 | -0.136 | 0.0047 | No |
142 | ABTB2 | ABTB2 Entrez,  Source | ankyrin repeat and BTB (POZ) domain containing 2 | 11886 | -0.149 | -0.0031 | No |
143 | PTEN | PTEN Entrez,  Source | phosphatase and tensin homolog (mutated in multiple advanced cancers 1) | 11925 | -0.152 | 0.0035 | No |
144 | HOXA5 | HOXA5 Entrez,  Source | homeobox A5 | 11961 | -0.154 | 0.0104 | No |
145 | BAT2 | BAT2 Entrez,  Source | HLA-B associated transcript 2 | 12112 | -0.166 | 0.0094 | No |
146 | STMN1 | STMN1 Entrez,  Source | stathmin 1/oncoprotein 18 | 12244 | -0.175 | 0.0104 | No |
147 | ADNP | ADNP Entrez,  Source | activity-dependent neuroprotector | 12323 | -0.181 | 0.0158 | No |
148 | BZW2 | BZW2 Entrez,  Source | basic leucine zipper and W2 domains 2 | 12597 | -0.210 | 0.0082 | No |
149 | ARHGEF12 | ARHGEF12 Entrez,  Source | Rho guanine nucleotide exchange factor (GEF) 12 | 12699 | -0.225 | 0.0145 | No |
150 | ITGB3BP | ITGB3BP Entrez,  Source | integrin beta 3 binding protein (beta3-endonexin) | 12793 | -0.240 | 0.0224 | No |
151 | BST2 | BST2 Entrez,  Source | bone marrow stromal cell antigen 2 | 13047 | -0.306 | 0.0224 | No |