Details for gene set BAF57_BT549

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	BAF57_BT549_UP
Enrichment Score (ES)	0.47882855
Normalized Enrichment Score (NES)	1.8005426
Nominal p-value	0.0
FDR q-value	0.02571457
FWER p-Value	0.97

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MAP3K8	MAP3K8 Entrez, Source	mitogen-activated protein kinase kinase kinase 8	12	0.878	0.0595	Yes
2	COL3A1	COL3A1 Entrez, Source	collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)	21	0.785	0.1129	Yes
3	TIMP2	TIMP2 Entrez, Source	TIMP metallopeptidase inhibitor 2	28	0.756	0.1644	Yes
4	MGP	MGP Entrez, Source	matrix Gla protein	52	0.634	0.2062	Yes
5	DPYD	DPYD Entrez, Source	dihydropyrimidine dehydrogenase	123	0.473	0.2334	Yes
6	F2R	F2R Entrez, Source	coagulation factor II (thrombin) receptor	142	0.455	0.2634	Yes
7	JAG1	JAG1 Entrez, Source	jagged 1 (Alagille syndrome)	222	0.366	0.2826	Yes
8	PLAT	PLAT Entrez, Source	plasminogen activator, tissue	230	0.365	0.3071	Yes
9	BTD	BTD Entrez, Source	biotinidase	401	0.259	0.3120	Yes
10	FOXO1A	FOXO1A Entrez, Source	forkhead box O1A (rhabdomyosarcoma)	411	0.256	0.3289	Yes
11	TDO2	TDO2 Entrez, Source	tryptophan 2,3-dioxygenase	514	0.223	0.3366	Yes
12	MAP1B	MAP1B Entrez, Source	microtubule-associated protein 1B	552	0.216	0.3486	Yes
13	BCAT1	BCAT1 Entrez, Source	branched chain aminotransferase 1, cytosolic	558	0.215	0.3630	Yes
14	TPBG	TPBG Entrez, Source	trophoblast glycoprotein	607	0.205	0.3735	Yes
15	UNC5B	UNC5B Entrez, Source	unc-5 homolog B (C. elegans)	648	0.197	0.3841	Yes
16	TGFB2	TGFB2 Entrez, Source	transforming growth factor, beta 2	659	0.195	0.3967	Yes
17	COL1A1	COL1A1 Entrez, Source	collagen, type I, alpha 1	673	0.190	0.4088	Yes
18	FBXO32	FBXO32 Entrez, Source	F-box protein 32	694	0.186	0.4201	Yes
19	TGFB1	TGFB1 Entrez, Source	transforming growth factor, beta 1 (Camurati-Engelmann disease)	821	0.166	0.4220	Yes
20	DPYSL3	DPYSL3 Entrez, Source	dihydropyrimidinase-like 3	917	0.154	0.4254	Yes
21	PLD3	PLD3 Entrez, Source	phospholipase D family, member 3	959	0.151	0.4327	Yes
22	SLC22A17	SLC22A17 Entrez, Source	solute carrier family 22 (organic cation transporter), member 17	1037	0.143	0.4367	Yes
23	AGC1	AGC1 Entrez, Source	aggrecan 1 (chondroitin sulfate proteoglycan 1, large aggregating proteoglycan, antigen identified by monoclonal antibody A0122)	1118	0.135	0.4399	Yes
24	SULF2	SULF2 Entrez, Source	sulfatase 2	1179	0.130	0.4443	Yes
25	KLHL24	KLHL24 Entrez, Source	kelch-like 24 (Drosophila)	1215	0.126	0.4503	Yes
26	EPAS1	EPAS1 Entrez, Source	endothelial PAS domain protein 1	1321	0.118	0.4505	Yes
27	IGSF4	IGSF4 Entrez, Source	immunoglobulin superfamily, member 4	1345	0.117	0.4567	Yes
28	NID2	NID2 Entrez, Source	nidogen 2 (osteonidogen)	1349	0.116	0.4645	Yes
29	CTHRC1	CTHRC1 Entrez, Source	collagen triple helix repeat containing 1	1418	0.112	0.4671	Yes
30	NGFRAP1	NGFRAP1 Entrez, Source	nerve growth factor receptor (TNFRSF16) associated protein 1	1421	0.112	0.4746	Yes
31	ALDH6A1	ALDH6A1 Entrez, Source	aldehyde dehydrogenase 6 family, member A1	1585	0.103	0.4694	Yes
32	TES	TES Entrez, Source	testis derived transcript (3 LIM domains)	1616	0.102	0.4741	Yes
33	PLAG1	PLAG1 Entrez, Source	pleiomorphic adenoma gene 1	1816	0.092	0.4654	Yes
34	SULF1	SULF1 Entrez, Source	sulfatase 1	1955	0.087	0.4609	Yes
35	FBLIM1	FBLIM1 Entrez, Source	filamin binding LIM protein 1	2047	0.083	0.4598	Yes
36	POU3F3	POU3F3 Entrez, Source	POU domain, class 3, transcription factor 3	2053	0.083	0.4651	Yes
37	PAWR	PAWR Entrez, Source	PRKC, apoptosis, WT1, regulator	2056	0.083	0.4706	Yes
38	ACTA2	ACTA2 Entrez, Source	actin, alpha 2, smooth muscle, aorta	2074	0.082	0.4750	Yes
39	GHR	GHR Entrez, Source	growth hormone receptor	2098	0.081	0.4788	Yes
40	BCAM	BCAM Entrez, Source	basal cell adhesion molecule (Lutheran blood group)	2316	0.073	0.4674	No
41	IGFBP6	IGFBP6 Entrez, Source	insulin-like growth factor binding protein 6	2356	0.072	0.4695	No
42	COL5A1	COL5A1 Entrez, Source	collagen, type V, alpha 1	2660	0.063	0.4509	No
43	CBLB	CBLB Entrez, Source	Cas-Br-M (murine) ecotropic retroviral transforming sequence b	2684	0.063	0.4535	No
44	SIPA1L1	SIPA1L1 Entrez, Source	signal-induced proliferation-associated 1 like 1	2701	0.063	0.4566	No
45	FN1	FN1 Entrez, Source	fibronectin 1	2715	0.062	0.4598	No
46	ME1	ME1 Entrez, Source	malic enzyme 1, NADP(+)-dependent, cytosolic	2902	0.057	0.4497	No
47	MAFB	MAFB Entrez, Source	v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)	3122	0.051	0.4367	No
48	STOM	STOM Entrez, Source	stomatin	3184	0.050	0.4355	No
49	ATXN1	ATXN1 Entrez, Source	ataxin 1	3197	0.050	0.4380	No
50	CA4	CA4 Entrez, Source	carbonic anhydrase IV	3258	0.048	0.4368	No
51	DCN	DCN Entrez, Source	decorin	3405	0.045	0.4288	No
52	SOCS2	SOCS2 Entrez, Source	suppressor of cytokine signaling 2	3428	0.044	0.4302	No
53	PTGFRN	PTGFRN Entrez, Source	prostaglandin F2 receptor negative regulator	3455	0.044	0.4312	No
54	FZD1	FZD1 Entrez, Source	frizzled homolog 1 (Drosophila)	3493	0.043	0.4314	No
55	IL1R1	IL1R1 Entrez, Source	interleukin 1 receptor, type I	3540	0.042	0.4308	No
56	SERPINB3	SERPINB3 Entrez, Source	serpin peptidase inhibitor, clade B (ovalbumin), member 3	3699	0.039	0.4215	No
57	BACE2	BACE2 Entrez, Source	beta-site APP-cleaving enzyme 2	4019	0.032	0.3996	No
58	SLC12A8	SLC12A8 Entrez, Source	solute carrier family 12 (potassium/chloride transporters), member 8	4151	0.030	0.3917	No
59	PAK3	PAK3 Entrez, Source	p21 (CDKN1A)-activated kinase 3	4196	0.029	0.3904	No
60	FNDC1	FNDC1 Entrez, Source	fibronectin type III domain containing 1	4271	0.028	0.3867	No
61	ANTXR1	ANTXR1 Entrez, Source	anthrax toxin receptor 1	4328	0.027	0.3843	No
62	CPE	CPE Entrez, Source	carboxypeptidase E	4444	0.025	0.3773	No
63	IGFBP5	IGFBP5 Entrez, Source	insulin-like growth factor binding protein 5	4507	0.023	0.3742	No
64	CYBRD1	CYBRD1 Entrez, Source	cytochrome b reductase 1	4511	0.023	0.3756	No
65	LUM	LUM Entrez, Source	lumican	4533	0.023	0.3756	No
66	SMTN	SMTN Entrez, Source	smoothelin	4588	0.022	0.3730	No
67	WT1	WT1 Entrez, Source	Wilms tumor 1	4628	0.021	0.3715	No
68	IFIT2	IFIT2 Entrez, Source	interferon-induced protein with tetratricopeptide repeats 2	5017	0.015	0.3431	No
69	TLE3	TLE3 Entrez, Source	transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	5051	0.014	0.3416	No
70	GATA3	GATA3 Entrez, Source	GATA binding protein 3	5124	0.013	0.3370	No
71	TGFBI	TGFBI Entrez, Source	transforming growth factor, beta-induced, 68kDa	5439	0.008	0.3138	No
72	NID1	NID1 Entrez, Source	nidogen 1	5553	0.007	0.3057	No
73	RHOJ	RHOJ Entrez, Source	ras homolog gene family, member J	5602	0.006	0.3025	No
74	PARVA	PARVA Entrez, Source	parvin, alpha	5605	0.006	0.3027	No
75	GJB2	GJB2 Entrez, Source	gap junction protein, beta 2, 26kDa (connexin 26)	5644	0.005	0.3002	No
76	DIO2	DIO2 Entrez, Source	deiodinase, iodothyronine, type II	5720	0.004	0.2948	No
77	MMP2	MMP2 Entrez, Source	matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	5780	0.003	0.2905	No
78	CALD1	CALD1 Entrez, Source	caldesmon 1	5970	0.001	0.2762	No
79	COPS8	COPS8 Entrez, Source	COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	6113	-0.002	0.2656	No
80	OXTR	OXTR Entrez, Source	oxytocin receptor	6165	-0.002	0.2619	No
81	SERINC5	SERINC5 Entrez, Source	serine incorporator 5	6205	-0.003	0.2592	No
82	CFI	CFI Entrez, Source	complement factor I	6257	-0.004	0.2556	No
83	PMP22	PMP22 Entrez, Source	peripheral myelin protein 22	6796	-0.012	0.2157	No
84	CHI3L1	CHI3L1 Entrez, Source	chitinase 3-like 1 (cartilage glycoprotein-39)	6833	-0.013	0.2138	No
85	TCEAL8	TCEAL8 Entrez, Source	transcription elongation factor A (SII)-like 8	6900	-0.014	0.2098	No
86	STRBP	STRBP Entrez, Source	spermatid perinuclear RNA binding protein	6915	-0.014	0.2097	No
87	KITLG	KITLG Entrez, Source	KIT ligand	7033	-0.016	0.2019	No
88	COL12A1	COL12A1 Entrez, Source	collagen, type XII, alpha 1	7095	-0.017	0.1984	No
89	COL15A1	COL15A1 Entrez, Source	collagen, type XV, alpha 1	7379	-0.021	0.1784	No
90	CD200	CD200 Entrez, Source	CD200 molecule	7585	-0.024	0.1645	No
91	RAB27A	RAB27A Entrez, Source	RAB27A, member RAS oncogene family	7609	-0.024	0.1645	No
92	SOCS3	SOCS3 Entrez, Source	suppressor of cytokine signaling 3	7799	-0.027	0.1520	No
93	PROS1	PROS1 Entrez, Source	protein S (alpha)	7951	-0.030	0.1427	No
94	SIPA1L2	SIPA1L2 Entrez, Source	signal-induced proliferation-associated 1 like 2	8023	-0.031	0.1395	No
95	THEX1	THEX1 Entrez, Source	three prime histone mRNA exonuclease 1	8176	-0.033	0.1302	No
96	SERPINB7	SERPINB7 Entrez, Source	serpin peptidase inhibitor, clade B (ovalbumin), member 7	8771	-0.043	0.0883	No
97	SDC2	SDC2 Entrez, Source	syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan)	8914	-0.046	0.0807	No
98	MARCKS	MARCKS Entrez, Source	myristoylated alanine-rich protein kinase C substrate	8955	-0.047	0.0808	No
99	PRRX1	PRRX1 Entrez, Source	paired related homeobox 1	8971	-0.047	0.0829	No
100	IGFBP4	IGFBP4 Entrez, Source	insulin-like growth factor binding protein 4	9082	-0.049	0.0779	No
101	FHL2	FHL2 Entrez, Source	four and a half LIM domains 2	9173	-0.050	0.0746	No
102	RPL37	RPL37 Entrez, Source	ribosomal protein L37	9228	-0.051	0.0740	No
103	DLL1	DLL1 Entrez, Source	delta-like 1 (Drosophila)	9257	-0.052	0.0754	No
104	SLC44A1	SLC44A1 Entrez, Source	solute carrier family 44, member 1	9410	-0.054	0.0677	No
105	ADD2	ADD2 Entrez, Source	adducin 2 (beta)	9424	-0.055	0.0704	No
106	PLSCR4	PLSCR4 Entrez, Source	phospholipid scramblase 4	9499	-0.056	0.0687	No
107	IFIT3	IFIT3 Entrez, Source	interferon-induced protein with tetratricopeptide repeats 3	9528	-0.056	0.0704	No
108	CSPG2	CSPG2 Entrez, Source	chondroitin sulfate proteoglycan 2 (versican)	9690	-0.060	0.0623	No
109	IRS1	IRS1 Entrez, Source	insulin receptor substrate 1	9795	-0.062	0.0587	No
110	ITGB5	ITGB5 Entrez, Source	integrin, beta 5	9946	-0.065	0.0519	No
111	ZBTB1	ZBTB1 Entrez, Source	zinc finger and BTB domain containing 1	9994	-0.066	0.0529	No
112	SRPX	SRPX Entrez, Source	sushi-repeat-containing protein, X-linked	10360	-0.074	0.0303	No
113	NEGR1	NEGR1 Entrez, Source	neuronal growth regulator 1	10429	-0.075	0.0303	No
114	LIFR	LIFR Entrez, Source	leukemia inhibitory factor receptor alpha	10469	-0.077	0.0327	No
115	PRSS35	PRSS35 Entrez, Source	protease, serine, 35	10887	-0.088	0.0071	No
116	KLRC2	KLRC2 Entrez, Source	killer cell lectin-like receptor subfamily C, member 2	11047	-0.092	0.0014	No
117	FAP	FAP Entrez, Source	fibroblast activation protein, alpha	11212	-0.096	-0.0044	No
118	NTRK2	NTRK2 Entrez, Source	neurotrophic tyrosine kinase, receptor, type 2	11369	-0.101	-0.0093	No
119	IL13RA1	IL13RA1 Entrez, Source	interleukin 13 receptor, alpha 1	11405	-0.102	-0.0049	No
120	WARS	WARS Entrez, Source	tryptophanyl-tRNA synthetase	11445	-0.104	-0.0007	No
121	ABCA1	ABCA1 Entrez, Source	ATP-binding cassette, sub-family A (ABC1), member 1	11627	-0.110	-0.0068	No
122	RTN1	RTN1 Entrez, Source	reticulon 1	11850	-0.119	-0.0154	No
123	NAP1L3	NAP1L3 Entrez, Source	nucleosome assembly protein 1-like 3	11966	-0.125	-0.0155	No
124	VLDLR	VLDLR Entrez, Source	very low density lipoprotein receptor	12037	-0.128	-0.0120	No
125	EXOSC7	EXOSC7 Entrez, Source	exosome component 7	12198	-0.137	-0.0147	No
126	GABBR2	GABBR2 Entrez, Source	gamma-aminobutyric acid (GABA) B receptor, 2	12401	-0.149	-0.0198	No
127	BMPR2	BMPR2 Entrez, Source	bone morphogenetic protein receptor, type II (serine/threonine kinase)	12471	-0.153	-0.0145	No
128	TGFBR1	TGFBR1 Entrez, Source	transforming growth factor, beta receptor I (activin A receptor type II-like kinase, 53kDa)	12538	-0.158	-0.0087	No
129	CASK	CASK Entrez, Source	calcium/calmodulin-dependent serine protein kinase (MAGUK family)	12562	-0.159	0.0005	No
130	AVIL	AVIL Entrez, Source	advillin	12650	-0.168	0.0055	No
131	RARRES1	RARRES1 Entrez, Source	retinoic acid receptor responder (tazarotene induced) 1	12923	-0.203	-0.0011	No
132	GULP1	GULP1 Entrez, Source	GULP, engulfment adaptor PTB domain containing 1	13017	-0.222	0.0071	No
133	GAS5	GAS5 Entrez, Source	growth arrest-specific 5	13103	-0.254	0.0181	No