Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
Upregulated in class | double_gel_8d |
GeneSet | BOQUEST_CD31PLUS_VS_CD31MINUS_DN |
Enrichment Score (ES) | 0.5467743 |
Normalized Enrichment Score (NES) | 2.0922647 |
Nominal p-value | 0.0 |
FDR q-value | 0.0011698724 |
FWER p-Value | 0.033 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | COL1A2 | COL1A2 Entrez,  Source | collagen, type I, alpha 2 | 6 | 1.154 | 0.0586 | Yes |
2 | COL3A1 | COL3A1 Entrez,  Source | collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) | 21 | 0.785 | 0.0977 | Yes |
3 | COL5A2 | COL5A2 Entrez,  Source | collagen, type V, alpha 2 | 34 | 0.714 | 0.1334 | Yes |
4 | MGP | MGP Entrez,  Source | matrix Gla protein | 52 | 0.634 | 0.1645 | Yes |
5 | BHLHB3 | BHLHB3 Entrez,  Source | basic helix-loop-helix domain containing, class B, 3 | 71 | 0.581 | 0.1929 | Yes |
6 | CRYAB | CRYAB Entrez,  Source | crystallin, alpha B | 106 | 0.494 | 0.2156 | Yes |
7 | OMD | OMD Entrez,  Source | osteomodulin | 109 | 0.490 | 0.2405 | Yes |
8 | TNFAIP6 | TNFAIP6 Entrez,  Source | tumor necrosis factor, alpha-induced protein 6 | 116 | 0.483 | 0.2648 | Yes |
9 | MRC2 | MRC2 Entrez,  Source | mannose receptor, C type 2 | 120 | 0.476 | 0.2890 | Yes |
10 | SERPINE2 | SERPINE2 Entrez,  Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | 140 | 0.455 | 0.3108 | Yes |
11 | LOX | LOX Entrez,  Source | lysyl oxidase | 154 | 0.441 | 0.3324 | Yes |
12 | FST | FST Entrez,  Source | follistatin | 169 | 0.423 | 0.3531 | Yes |
13 | PRELP | PRELP Entrez,  Source | proline/arginine-rich end leucine-rich repeat protein | 204 | 0.383 | 0.3701 | Yes |
14 | CFD | CFD Entrez,  Source | complement factor D (adipsin) | 228 | 0.365 | 0.3870 | Yes |
15 | PTPRD | PTPRD Entrez,  Source | protein tyrosine phosphatase, receptor type, D | 330 | 0.290 | 0.3942 | Yes |
16 | ACOX2 | ACOX2 Entrez,  Source | acyl-Coenzyme A oxidase 2, branched chain | 379 | 0.269 | 0.4043 | Yes |
17 | TMEM176B | TMEM176B Entrez,  Source | transmembrane protein 176B | 403 | 0.258 | 0.4158 | Yes |
18 | GSN | GSN Entrez,  Source | gelsolin (amyloidosis, Finnish type) | 483 | 0.233 | 0.4218 | Yes |
19 | IGFBP3 | IGFBP3 Entrez,  Source | insulin-like growth factor binding protein 3 | 571 | 0.212 | 0.4260 | Yes |
20 | PLAGL1 | PLAGL1 Entrez,  Source | pleiomorphic adenoma gene-like 1 | 576 | 0.211 | 0.4365 | Yes |
21 | SGCE | SGCE Entrez,  Source | sarcoglycan, epsilon | 650 | 0.197 | 0.4411 | Yes |
22 | COL6A2 | COL6A2 Entrez,  Source | collagen, type VI, alpha 2 | 658 | 0.195 | 0.4505 | Yes |
23 | COL1A1 | COL1A1 Entrez,  Source | collagen, type I, alpha 1 | 673 | 0.190 | 0.4592 | Yes |
24 | ALDH1A1 | ALDH1A1 Entrez,  Source | aldehyde dehydrogenase 1 family, member A1 | 739 | 0.178 | 0.4634 | Yes |
25 | EMP3 | EMP3 Entrez,  Source | epithelial membrane protein 3 | 755 | 0.176 | 0.4713 | Yes |
26 | TIMP1 | TIMP1 Entrez,  Source | TIMP metallopeptidase inhibitor 1 | 759 | 0.176 | 0.4801 | Yes |
27 | FEZ1 | FEZ1 Entrez,  Source | fasciculation and elongation protein zeta 1 (zygin I) | 794 | 0.170 | 0.4862 | Yes |
28 | GSTM3 | GSTM3 Entrez,  Source | glutathione S-transferase M3 (brain) | 890 | 0.157 | 0.4871 | Yes |
29 | F3 | F3 Entrez,  Source | coagulation factor III (thromboplastin, tissue factor) | 943 | 0.152 | 0.4909 | Yes |
30 | S100A4 | S100A4 Entrez,  Source | S100 calcium binding protein A4 | 962 | 0.151 | 0.4972 | Yes |
31 | SCRN1 | SCRN1 Entrez,  Source | secernin 1 | 1023 | 0.145 | 0.5001 | Yes |
32 | PDE4DIP | PDE4DIP Entrez,  Source | phosphodiesterase 4D interacting protein (myomegalin) | 1077 | 0.138 | 0.5031 | Yes |
33 | BASP1 | BASP1 Entrez,  Source | brain abundant, membrane attached signal protein 1 | 1105 | 0.136 | 0.5081 | Yes |
34 | LIF | LIF Entrez,  Source | leukemia inhibitory factor (cholinergic differentiation factor) | 1203 | 0.127 | 0.5072 | Yes |
35 | PCOLCE | PCOLCE Entrez,  Source | procollagen C-endopeptidase enhancer | 1214 | 0.126 | 0.5129 | Yes |
36 | CD302 | CD302 Entrez,  Source | CD302 molecule | 1233 | 0.125 | 0.5180 | Yes |
37 | TSPAN8 | TSPAN8 Entrez,  Source | tetraspanin 8 | 1311 | 0.119 | 0.5182 | Yes |
38 | SERPINA5 | SERPINA5 Entrez,  Source | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 | 1314 | 0.119 | 0.5242 | Yes |
39 | AXL | AXL Entrez,  Source | AXL receptor tyrosine kinase | 1373 | 0.115 | 0.5257 | Yes |
40 | TWIST1 | TWIST1 Entrez,  Source | twist homolog 1 (acrocephalosyndactyly 3; Saethre-Chotzen syndrome) (Drosophila) | 1380 | 0.115 | 0.5311 | Yes |
41 | PLN | PLN Entrez,  Source | phospholamban | 1420 | 0.112 | 0.5339 | Yes |
42 | RNASE4 | RNASE4 Entrez,  Source | ribonuclease, RNase A family, 4 | 1525 | 0.107 | 0.5314 | Yes |
43 | DDR2 | DDR2 Entrez,  Source | discoidin domain receptor family, member 2 | 1598 | 0.103 | 0.5312 | Yes |
44 | OSR2 | OSR2 Entrez,  Source | odd-skipped related 2 (Drosophila) | 1615 | 0.102 | 0.5352 | Yes |
45 | FBN1 | FBN1 Entrez,  Source | fibrillin 1 | 1643 | 0.100 | 0.5383 | Yes |
46 | GPC3 | GPC3 Entrez,  Source | glypican 3 | 1656 | 0.100 | 0.5425 | Yes |
47 | DCX | DCX Entrez,  Source | doublecortex; lissencephaly, X-linked (doublecortin) | 1708 | 0.097 | 0.5436 | Yes |
48 | FXYD1 | FXYD1 Entrez,  Source | FXYD domain containing ion transport regulator 1 (phospholemman) | 1781 | 0.094 | 0.5430 | Yes |
49 | TMED3 | TMED3 Entrez,  Source | transmembrane emp24 protein transport domain containing 3 | 1805 | 0.093 | 0.5459 | Yes |
50 | CXCL14 | CXCL14 Entrez,  Source | chemokine (C-X-C motif) ligand 14 | 1856 | 0.090 | 0.5468 | Yes |
51 | APOE | APOE Entrez,  Source | apolipoprotein E | 2123 | 0.080 | 0.5307 | No |
52 | CHRDL1 | CHRDL1 Entrez,  Source | chordin-like 1 | 2170 | 0.078 | 0.5312 | No |
53 | DZIP1 | DZIP1 Entrez,  Source | DAZ interacting protein 1 | 2229 | 0.076 | 0.5307 | No |
54 | WISP2 | WISP2 Entrez,  Source | WNT1 inducible signaling pathway protein 2 | 2285 | 0.074 | 0.5304 | No |
55 | IGFBP6 | IGFBP6 Entrez,  Source | insulin-like growth factor binding protein 6 | 2356 | 0.072 | 0.5288 | No |
56 | CUGBP2 | CUGBP2 Entrez,  Source | CUG triplet repeat, RNA binding protein 2 | 2451 | 0.069 | 0.5252 | No |
57 | COL5A1 | COL5A1 Entrez,  Source | collagen, type V, alpha 1 | 2660 | 0.063 | 0.5127 | No |
58 | EDG2 | EDG2 Entrez,  Source | endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2 | 2690 | 0.063 | 0.5137 | No |
59 | ANGPT1 | ANGPT1 Entrez,  Source | angiopoietin 1 | 2782 | 0.061 | 0.5099 | No |
60 | CEBPB | CEBPB Entrez,  Source | CCAAT/enhancer binding protein (C/EBP), beta | 2848 | 0.059 | 0.5080 | No |
61 | HTRA1 | HTRA1 Entrez,  Source | HtrA serine peptidase 1 | 2880 | 0.058 | 0.5086 | No |
62 | HNMT | HNMT Entrez,  Source | histamine N-methyltransferase | 3098 | 0.052 | 0.4948 | No |
63 | MFAP4 | MFAP4 Entrez,  Source | microfibrillar-associated protein 4 | 3105 | 0.052 | 0.4970 | No |
64 | LTBP2 | LTBP2 Entrez,  Source | latent transforming growth factor beta binding protein 2 | 3107 | 0.052 | 0.4995 | No |
65 | MAFB | MAFB Entrez,  Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian) | 3122 | 0.051 | 0.5011 | No |
66 | APOD | APOD Entrez,  Source | apolipoprotein D | 3255 | 0.048 | 0.4936 | No |
67 | PTGFR | PTGFR Entrez,  Source | prostaglandin F receptor (FP) | 3331 | 0.047 | 0.4903 | No |
68 | DCN | DCN Entrez,  Source | decorin | 3405 | 0.045 | 0.4870 | No |
69 | PDGFD | PDGFD Entrez,  Source | platelet derived growth factor D | 3442 | 0.044 | 0.4866 | No |
70 | COL16A1 | COL16A1 Entrez,  Source | collagen, type XVI, alpha 1 | 3530 | 0.042 | 0.4821 | No |
71 | PDLIM3 | PDLIM3 Entrez,  Source | PDZ and LIM domain 3 | 3560 | 0.042 | 0.4821 | No |
72 | KCNK1 | KCNK1 Entrez,  Source | potassium channel, subfamily K, member 1 | 3612 | 0.041 | 0.4803 | No |
73 | ASPA | ASPA Entrez,  Source | aspartoacylase (Canavan disease) | 3681 | 0.039 | 0.4771 | No |
74 | GAS7 | GAS7 Entrez,  Source | growth arrest-specific 7 | 3956 | 0.034 | 0.4581 | No |
75 | FGF7 | FGF7 Entrez,  Source | fibroblast growth factor 7 (keratinocyte growth factor) | 4156 | 0.030 | 0.4445 | No |
76 | CYBRD1 | CYBRD1 Entrez,  Source | cytochrome b reductase 1 | 4511 | 0.023 | 0.4189 | No |
77 | LUM | LUM Entrez,  Source | lumican | 4533 | 0.023 | 0.4184 | No |
78 | GDF10 | GDF10 Entrez,  Source | growth differentiation factor 10 | 4564 | 0.022 | 0.4173 | No |
79 | PTGIS | PTGIS Entrez,  Source | prostaglandin I2 (prostacyclin) synthase | 4653 | 0.021 | 0.4117 | No |
80 | PLA2G4A | PLA2G4A Entrez,  Source | phospholipase A2, group IVA (cytosolic, calcium-dependent) | 4688 | 0.020 | 0.4101 | No |
81 | SERPINF1 | SERPINF1 Entrez,  Source | serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 | 4697 | 0.020 | 0.4106 | No |
82 | GFPT2 | GFPT2 Entrez,  Source | glutamine-fructose-6-phosphate transaminase 2 | 4965 | 0.016 | 0.3911 | No |
83 | NET1 | NET1 Entrez,  Source | neuroepithelial cell transforming gene 1 | 5025 | 0.015 | 0.3874 | No |
84 | INHBA | INHBA Entrez,  Source | inhibin, beta A (activin A, activin AB alpha polypeptide) | 5081 | 0.014 | 0.3840 | No |
85 | PLA2G2A | PLA2G2A Entrez,  Source | phospholipase A2, group IIA (platelets, synovial fluid) | 5199 | 0.012 | 0.3757 | No |
86 | CFB | CFB Entrez,  Source | complement factor B | 5251 | 0.011 | 0.3724 | No |
87 | SLIT2 | SLIT2 Entrez,  Source | slit homolog 2 (Drosophila) | 5293 | 0.010 | 0.3698 | No |
88 | CXCL12 | CXCL12 Entrez,  Source | chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) | 5302 | 0.010 | 0.3697 | No |
89 | LRP1 | LRP1 Entrez,  Source | low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) | 5770 | 0.003 | 0.3345 | No |
90 | MMP2 | MMP2 Entrez,  Source | matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) | 5780 | 0.003 | 0.3339 | No |
91 | BMPR1A | BMPR1A Entrez,  Source | bone morphogenetic protein receptor, type IA | 6028 | -0.000 | 0.3152 | No |
92 | PDGFRA | PDGFRA Entrez,  Source | platelet-derived growth factor receptor, alpha polypeptide | 6101 | -0.002 | 0.3098 | No |
93 | CDO1 | CDO1 Entrez,  Source | cysteine dioxygenase, type I | 6103 | -0.002 | 0.3099 | No |
94 | GPC4 | GPC4 Entrez,  Source | glypican 4 | 6215 | -0.003 | 0.3016 | No |
95 | SPOCK1 | SPOCK1 Entrez,  Source | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 | 6415 | -0.006 | 0.2869 | No |
96 | GSTM5 | GSTM5 Entrez,  Source | glutathione S-transferase M5 | 6680 | -0.010 | 0.2674 | No |
97 | THBS2 | THBS2 Entrez,  Source | thrombospondin 2 | 6731 | -0.011 | 0.2642 | No |
98 | CRABP2 | CRABP2 Entrez,  Source | cellular retinoic acid binding protein 2 | 6879 | -0.013 | 0.2537 | No |
99 | ANPEP | ANPEP Entrez,  Source | alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150) | 6961 | -0.014 | 0.2483 | No |
100 | CDKN2C | CDKN2C Entrez,  Source | cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) | 7011 | -0.015 | 0.2453 | No |
101 | CDH11 | CDH11 Entrez,  Source | cadherin 11, type 2, OB-cadherin (osteoblast) | 7101 | -0.017 | 0.2395 | No |
102 | CFH | CFH Entrez,  Source | complement factor H | 7191 | -0.018 | 0.2336 | No |
103 | SFRP4 | SFRP4 Entrez,  Source | secreted frizzled-related protein 4 | 7370 | -0.021 | 0.2212 | No |
104 | PDGFRL | PDGFRL Entrez,  Source | platelet-derived growth factor receptor-like | 7568 | -0.024 | 0.2075 | No |
105 | MME | MME Entrez,  Source | membrane metallo-endopeptidase (neutral endopeptidase, enkephalinase) | 7622 | -0.025 | 0.2047 | No |
106 | NOVA1 | NOVA1 Entrez,  Source | neuro-oncological ventral antigen 1 | 7658 | -0.025 | 0.2033 | No |
107 | NT5E | NT5E Entrez,  Source | 5'-nucleotidase, ecto (CD73) | 7715 | -0.026 | 0.2004 | No |
108 | C6 | C6 Entrez,  Source | complement component 6 | 7841 | -0.028 | 0.1924 | No |
109 | F10 | F10 Entrez,  Source | coagulation factor X | 7895 | -0.029 | 0.1899 | No |
110 | IGF1 | IGF1 Entrez,  Source | insulin-like growth factor 1 (somatomedin C) | 7950 | -0.030 | 0.1873 | No |
111 | FBLN5 | FBLN5 Entrez,  Source | fibulin 5 | 8019 | -0.031 | 0.1837 | No |
112 | NPY1R | NPY1R Entrez,  Source | neuropeptide Y receptor Y1 | 8092 | -0.032 | 0.1799 | No |
113 | CTSK | CTSK Entrez,  Source | cathepsin K (pycnodysostosis) | 8117 | -0.032 | 0.1798 | No |
114 | EFEMP1 | EFEMP1 Entrez,  Source | EGF-containing fibulin-like extracellular matrix protein 1 | 8124 | -0.033 | 0.1810 | No |
115 | PTGDS | PTGDS Entrez,  Source | prostaglandin D2 synthase 21kDa (brain) | 8146 | -0.033 | 0.1811 | No |
116 | LRRC17 | LRRC17 Entrez,  Source | leucine rich repeat containing 17 | 8238 | -0.035 | 0.1760 | No |
117 | FMOD | FMOD Entrez,  Source | fibromodulin | 8247 | -0.035 | 0.1771 | No |
118 | KCND2 | KCND2 Entrez,  Source | potassium voltage-gated channel, Shal-related subfamily, member 2 | 8361 | -0.037 | 0.1705 | No |
119 | CAPN6 | CAPN6 Entrez,  Source | calpain 6 | 8491 | -0.039 | 0.1627 | No |
120 | SLIT3 | SLIT3 Entrez,  Source | slit homolog 3 (Drosophila) | 8691 | -0.042 | 0.1497 | No |
121 | SPON2 | SPON2 Entrez,  Source | spondin 2, extracellular matrix protein | 8759 | -0.043 | 0.1468 | No |
122 | SDC2 | SDC2 Entrez,  Source | syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan) | 8914 | -0.046 | 0.1375 | No |
123 | PRRX1 | PRRX1 Entrez,  Source | paired related homeobox 1 | 8971 | -0.047 | 0.1357 | No |
124 | MBP | MBP Entrez,  Source | myelin basic protein | 8983 | -0.047 | 0.1372 | No |
125 | GPNMB | GPNMB Entrez,  Source | glycoprotein (transmembrane) nmb | 9192 | -0.050 | 0.1241 | No |
126 | CSPG2 | CSPG2 Entrez,  Source | chondroitin sulfate proteoglycan 2 (versican) | 9690 | -0.060 | 0.0894 | No |
127 | DCAMKL1 | DCAMKL1 Entrez,  Source | doublecortin and CaM kinase-like 1 | 9719 | -0.060 | 0.0904 | No |
128 | IRS1 | IRS1 Entrez,  Source | insulin receptor substrate 1 | 9795 | -0.062 | 0.0879 | No |
129 | ATP1A2 | ATP1A2 Entrez,  Source | ATPase, Na+/K+ transporting, alpha 2 (+) polypeptide | 9825 | -0.063 | 0.0889 | No |
130 | GRIA3 | GRIA3 Entrez,  Source | glutamate receptor, ionotrophic, AMPA 3 | 9917 | -0.065 | 0.0853 | No |
131 | MYH11 | MYH11 Entrez,  Source | myosin, heavy chain 11, smooth muscle | 10036 | -0.067 | 0.0798 | No |
132 | MYOC | MYOC Entrez,  Source | myocilin, trabecular meshwork inducible glucocorticoid response | 10189 | -0.070 | 0.0719 | No |
133 | COLEC12 | COLEC12 Entrez,  Source | collectin sub-family member 12 | 10217 | -0.071 | 0.0734 | No |
134 | HSPB8 | HSPB8 Entrez,  Source | heat shock 22kDa protein 8 | 10232 | -0.071 | 0.0760 | No |
135 | SLC22A3 | SLC22A3 Entrez,  Source | solute carrier family 22 (extraneuronal monoamine transporter), member 3 | 10247 | -0.071 | 0.0786 | No |
136 | SRPX | SRPX Entrez,  Source | sushi-repeat-containing protein, X-linked | 10360 | -0.074 | 0.0739 | No |
137 | FIGF | FIGF Entrez,  Source | c-fos induced growth factor (vascular endothelial growth factor D) | 10740 | -0.084 | 0.0495 | No |
138 | FAP | FAP Entrez,  Source | fibroblast activation protein, alpha | 11212 | -0.096 | 0.0187 | No |
139 | WNT5A | WNT5A Entrez,  Source | wingless-type MMTV integration site family, member 5A | 11232 | -0.097 | 0.0222 | No |
140 | NTRK2 | NTRK2 Entrez,  Source | neurotrophic tyrosine kinase, receptor, type 2 | 11369 | -0.101 | 0.0170 | No |
141 | SHOX2 | SHOX2 Entrez,  Source | short stature homeobox 2 | 11372 | -0.101 | 0.0221 | No |
142 | LSP1 | LSP1 Entrez,  Source | lymphocyte-specific protein 1 | 11557 | -0.108 | 0.0136 | No |
143 | OGT | OGT Entrez,  Source | O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) | 11749 | -0.115 | 0.0050 | No |
144 | ROBO1 | ROBO1 Entrez,  Source | roundabout, axon guidance receptor, homolog 1 (Drosophila) | 12116 | -0.133 | -0.0159 | No |
145 | SOX9 | SOX9 Entrez,  Source | SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal) | 12407 | -0.149 | -0.0303 | No |
146 | C1ORF24 | C1ORF24 Entrez,  Source | chromosome 1 open reading frame 24 | 12569 | -0.160 | -0.0343 | No |
147 | NOTCH2 | NOTCH2 Entrez,  Source | Notch homolog 2 (Drosophila) | 12769 | -0.180 | -0.0402 | No |
148 | CD44 | CD44 Entrez,  Source | CD44 molecule (Indian blood group) | 12802 | -0.185 | -0.0331 | No |
149 | EGFR | EGFR Entrez,  Source | epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) | 12857 | -0.193 | -0.0274 | No |
150 | UGDH | UGDH Entrez,  Source | UDP-glucose dehydrogenase | 13081 | -0.242 | -0.0319 | No |
151 | FMO1 | FMO1 Entrez,  Source | flavin containing monooxygenase 1 | 13123 | -0.259 | -0.0217 | No |
152 | AOX1 | AOX1 Entrez,  Source | aldehyde oxidase 1 | 13251 | -0.347 | -0.0136 | No |
153 | CES1 | CES1 Entrez,  Source | carboxylesterase 1 (monocyte/macrophage serine esterase 1) | 13281 | -0.399 | 0.0046 | No |