Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_48h |
| GeneSet | CANCER_UNDIFFERENTIATED_META_UP |
| Enrichment Score (ES) | -0.41832379 |
| Normalized Enrichment Score (NES) | -1.3736438 |
| Nominal p-value | 0.07126949 |
| FDR q-value | 0.36759895 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 6 | 1.154 | 0.2133 | No |
| 2 | TMSB10 | TMSB10 Entrez, Source | thymosin, beta 10 | 670 | 0.192 | 0.1989 | No |
| 3 | NUDT1 | NUDT1 Entrez, Source | nudix (nucleoside diphosphate linked moiety X)-type motif 1 | 786 | 0.172 | 0.2221 | No |
| 4 | GAS6 | GAS6 Entrez, Source | growth arrest-specific 6 | 883 | 0.158 | 0.2442 | No |
| 5 | KIF2C | KIF2C Entrez, Source | kinesin family member 2C | 1773 | 0.094 | 0.1948 | No |
| 6 | IFI30 | IFI30 Entrez, Source | interferon, gamma-inducible protein 30 | 4301 | 0.027 | 0.0100 | No |
| 7 | ADRM1 | ADRM1 Entrez, Source | adhesion regulating molecule 1 | 4443 | 0.025 | 0.0039 | No |
| 8 | KIAA0101 | KIAA0101 Entrez, Source | KIAA0101 | 4903 | 0.017 | -0.0275 | No |
| 9 | FOXM1 | FOXM1 Entrez, Source | forkhead box M1 | 5399 | 0.009 | -0.0631 | No |
| 10 | CTSL | CTSL Entrez, Source | cathepsin L | 5451 | 0.008 | -0.0654 | No |
| 11 | H2AFZ | H2AFZ Entrez, Source | H2A histone family, member Z | 5766 | 0.003 | -0.0884 | No |
| 12 | PSMD2 | PSMD2 Entrez, Source | proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 | 6352 | -0.006 | -0.1314 | No |
| 13 | CCNB1 | CCNB1 Entrez, Source | cyclin B1 | 6785 | -0.012 | -0.1616 | No |
| 14 | BIRC5 | BIRC5 Entrez, Source | baculoviral IAP repeat-containing 5 (survivin) | 7015 | -0.015 | -0.1760 | No |
| 15 | H2AFX | H2AFX Entrez, Source | H2A histone family, member X | 7594 | -0.024 | -0.2150 | No |
| 16 | KPNA2 | KPNA2 Entrez, Source | karyopherin alpha 2 (RAG cohort 1, importin alpha 1) | 7811 | -0.028 | -0.2261 | No |
| 17 | PRDX4 | PRDX4 Entrez, Source | peroxiredoxin 4 | 8646 | -0.041 | -0.2812 | No |
| 18 | PSMB7 | PSMB7 Entrez, Source | proteasome (prosome, macropain) subunit, beta type, 7 | 8832 | -0.044 | -0.2869 | No |
| 19 | CCNA2 | CCNA2 Entrez, Source | cyclin A2 | 8927 | -0.046 | -0.2854 | No |
| 20 | CDKN3 | CDKN3 Entrez, Source | cyclin-dependent kinase inhibitor 3 (CDK2-associated dual specificity phosphatase) | 9384 | -0.054 | -0.3097 | No |
| 21 | CCT6A | CCT6A Entrez, Source | chaperonin containing TCP1, subunit 6A (zeta 1) | 10250 | -0.072 | -0.3615 | No |
| 22 | EIF2S2 | EIF2S2 Entrez, Source | eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa | 10731 | -0.084 | -0.3821 | No |
| 23 | TOP2A | TOP2A Entrez, Source | topoisomerase (DNA) II alpha 170kDa | 11066 | -0.092 | -0.3901 | No |
| 24 | PCNA | PCNA Entrez, Source | proliferating cell nuclear antigen | 11131 | -0.094 | -0.3775 | No |
| 25 | GARS | GARS Entrez, Source | glycyl-tRNA synthetase | 11341 | -0.100 | -0.3747 | No |
| 26 | SSBP1 | SSBP1 Entrez, Source | single-stranded DNA binding protein 1 | 11852 | -0.119 | -0.3909 | No |
| 27 | CDC20 | CDC20 Entrez, Source | CDC20 cell division cycle 20 homolog (S. cerevisiae) | 12218 | -0.137 | -0.3929 | Yes |
| 28 | GCLM | GCLM Entrez, Source | glutamate-cysteine ligase, modifier subunit | 12248 | -0.139 | -0.3692 | Yes |
| 29 | NME1 | NME1 Entrez, Source | non-metastatic cells 1, protein (NM23A) expressed in | 12324 | -0.144 | -0.3482 | Yes |
| 30 | TRIP13 | TRIP13 Entrez, Source | thyroid hormone receptor interactor 13 | 12670 | -0.170 | -0.3426 | Yes |
| 31 | TAP1 | TAP1 Entrez, Source | transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) | 12854 | -0.192 | -0.3207 | Yes |
| 32 | GGH | GGH Entrez, Source | gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) | 12902 | -0.200 | -0.2872 | Yes |
| 33 | TUBB | TUBB Entrez, Source | tubulin, beta | 12909 | -0.201 | -0.2505 | Yes |
| 34 | SLC16A1 | SLC16A1 Entrez, Source | solute carrier family 16, member 1 (monocarboxylic acid transporter 1) | 12950 | -0.209 | -0.2148 | Yes |
| 35 | SLC7A5 | SLC7A5 Entrez, Source | solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 | 13201 | -0.300 | -0.1780 | Yes |
| 36 | MCM6 | MCM6 Entrez, Source | MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) | 13204 | -0.304 | -0.1219 | Yes |
| 37 | CXCL9 | CXCL9 Entrez, Source | chemokine (C-X-C motif) ligand 9 | 13330 | -0.714 | 0.0009 | Yes |
