Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | CCAWWNAAGG_V$SRF_Q4 |
| Enrichment Score (ES) | 0.5692658 |
| Normalized Enrichment Score (NES) | 1.7820843 |
| Nominal p-value | 0.009259259 |
| FDR q-value | 0.028649088 |
| FWER p-Value | 0.981 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | EGR2 | EGR2 Entrez, Source | early growth response 2 (Krox-20 homolog, Drosophila) | 87 | 0.537 | 0.1386 | Yes |
| 2 | RAB30 | RAB30 Entrez, Source | RAB30, member RAS oncogene family | 98 | 0.518 | 0.2778 | Yes |
| 3 | TAGLN | TAGLN Entrez, Source | transgelin | 250 | 0.344 | 0.3592 | Yes |
| 4 | DUSP5 | DUSP5 Entrez, Source | dual specificity phosphatase 5 | 472 | 0.237 | 0.4065 | Yes |
| 5 | ACTG2 | ACTG2 Entrez, Source | actin, gamma 2, smooth muscle, enteric | 711 | 0.183 | 0.4382 | Yes |
| 6 | EGR1 | EGR1 Entrez, Source | early growth response 1 | 756 | 0.176 | 0.4824 | Yes |
| 7 | NR4A1 | NR4A1 Entrez, Source | nuclear receptor subfamily 4, group A, member 1 | 1043 | 0.142 | 0.4992 | Yes |
| 8 | ACTA1 | ACTA1 Entrez, Source | actin, alpha 1, skeletal muscle | 1218 | 0.126 | 0.5202 | Yes |
| 9 | MAPKAPK2 | MAPKAPK2 Entrez, Source | mitogen-activated protein kinase-activated protein kinase 2 | 1230 | 0.125 | 0.5532 | Yes |
| 10 | PLN | PLN Entrez, Source | phospholamban | 1420 | 0.112 | 0.5693 | Yes |
| 11 | SDPR | SDPR Entrez, Source | serum deprivation response (phosphatidylserine binding protein) | 2231 | 0.076 | 0.5290 | No |
| 12 | DAPK3 | DAPK3 Entrez, Source | death-associated protein kinase 3 | 2490 | 0.068 | 0.5281 | No |
| 13 | DUSP2 | DUSP2 Entrez, Source | dual specificity phosphatase 2 | 2724 | 0.062 | 0.5273 | No |
| 14 | TRDN | TRDN Entrez, Source | triadin | 2851 | 0.059 | 0.5337 | No |
| 15 | PLCB3 | PLCB3 Entrez, Source | phospholipase C, beta 3 (phosphatidylinositol-specific) | 3154 | 0.051 | 0.5247 | No |
| 16 | TCF4 | TCF4 Entrez, Source | transcription factor 4 | 3628 | 0.040 | 0.5000 | No |
| 17 | FGFRL1 | FGFRL1 Entrez, Source | fibroblast growth factor receptor-like 1 | 3851 | 0.036 | 0.4930 | No |
| 18 | KCNK3 | KCNK3 Entrez, Source | potassium channel, subfamily K, member 3 | 4699 | 0.020 | 0.4347 | No |
| 19 | RARB | RARB Entrez, Source | retinoic acid receptor, beta | 4926 | 0.016 | 0.4221 | No |
| 20 | ACTB | ACTB Entrez, Source | actin, beta | 5041 | 0.014 | 0.4175 | No |
| 21 | NKX6-1 | NKX6-1 Entrez, Source | NK6 transcription factor related, locus 1 (Drosophila) | 5386 | 0.009 | 0.3940 | No |
| 22 | PICALM | PICALM Entrez, Source | phosphatidylinositol binding clathrin assembly protein | 5636 | 0.005 | 0.3767 | No |
| 23 | NPPA | NPPA Entrez, Source | natriuretic peptide precursor A | 5715 | 0.004 | 0.3719 | No |
| 24 | TNNC1 | TNNC1 Entrez, Source | troponin C type 1 (slow) | 5793 | 0.003 | 0.3669 | No |
| 25 | CALD1 | CALD1 Entrez, Source | caldesmon 1 | 5970 | 0.001 | 0.3538 | No |
| 26 | SFRS12 | SFRS12 Entrez, Source | splicing factor, arginine/serine-rich 12 | 6368 | -0.006 | 0.3255 | No |
| 27 | SCN3B | SCN3B Entrez, Source | sodium channel, voltage-gated, type III, beta | 6379 | -0.006 | 0.3264 | No |
| 28 | MBNL1 | MBNL1 Entrez, Source | muscleblind-like (Drosophila) | 6403 | -0.006 | 0.3264 | No |
| 29 | ATRX | ATRX Entrez, Source | alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) | 7295 | -0.019 | 0.2646 | No |
| 30 | PPP1R12A | PPP1R12A Entrez, Source | protein phosphatase 1, regulatory (inhibitor) subunit 12A | 7696 | -0.026 | 0.2415 | No |
| 31 | CSRP1 | CSRP1 Entrez, Source | cysteine and glycine-rich protein 1 | 8162 | -0.033 | 0.2155 | No |
| 32 | PHF12 | PHF12 Entrez, Source | PHD finger protein 12 | 8193 | -0.034 | 0.2224 | No |
| 33 | EPHB1 | EPHB1 Entrez, Source | EPH receptor B1 | 8320 | -0.036 | 0.2227 | No |
| 34 | TITF1 | TITF1 Entrez, Source | thyroid transcription factor 1 | 9298 | -0.052 | 0.1634 | No |
| 35 | DIXDC1 | DIXDC1 Entrez, Source | DIX domain containing 1 | 9318 | -0.053 | 0.1762 | No |
| 36 | MRGPRF | MRGPRF Entrez, Source | MAS-related GPR, member F | 9403 | -0.054 | 0.1846 | No |
| 37 | ANP32E | ANP32E Entrez, Source | acidic (leucine-rich) nuclear phosphoprotein 32 family, member E | 9451 | -0.055 | 0.1959 | No |
| 38 | MYH11 | MYH11 Entrez, Source | myosin, heavy chain 11, smooth muscle | 10036 | -0.067 | 0.1702 | No |
| 39 | PFN1 | PFN1 Entrez, Source | profilin 1 | 10821 | -0.086 | 0.1344 | No |
| 40 | CKM | CKM Entrez, Source | creatine kinase, muscle | 11187 | -0.095 | 0.1328 | No |
| 41 | LSP1 | LSP1 Entrez, Source | lymphocyte-specific protein 1 | 11557 | -0.108 | 0.1342 | No |
