Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | CCR5PATHWAY |
| Enrichment Score (ES) | 0.7480636 |
| Normalized Enrichment Score (NES) | 1.9045681 |
| Nominal p-value | 0.0019569471 |
| FDR q-value | 0.012072129 |
| FWER p-Value | 0.587 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 9 | 0.936 | 0.4156 | Yes |
| 2 | CCL2 | CCL2 Entrez, Source | chemokine (C-C motif) ligand 2 | 145 | 0.452 | 0.6064 | Yes |
| 3 | PTK2B | PTK2B Entrez, Source | PTK2B protein tyrosine kinase 2 beta | 256 | 0.337 | 0.7481 | Yes |
| 4 | PRKCA | PRKCA Entrez, Source | protein kinase C, alpha | 1663 | 0.099 | 0.6868 | No |
| 5 | GNAQ | GNAQ Entrez, Source | guanine nucleotide binding protein (G protein), q polypeptide | 2897 | 0.057 | 0.6198 | No |
| 6 | JUN | JUN Entrez, Source | jun oncogene | 3104 | 0.052 | 0.6273 | No |
| 7 | CALM3 | CALM3 Entrez, Source | calmodulin 3 (phosphorylase kinase, delta) | 3289 | 0.048 | 0.6347 | No |
| 8 | CXCL12 | CXCL12 Entrez, Source | chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) | 5302 | 0.010 | 0.4882 | No |
| 9 | SYT1 | SYT1 Entrez, Source | synaptotagmin I | 5312 | 0.010 | 0.4919 | No |
| 10 | MAPK14 | MAPK14 Entrez, Source | mitogen-activated protein kinase 14 | 5554 | 0.007 | 0.4768 | No |
| 11 | CXCR4 | CXCR4 Entrez, Source | chemokine (C-X-C motif) receptor 4 | 5981 | 0.000 | 0.4450 | No |
| 12 | CCL4 | CCL4 Entrez, Source | chemokine (C-C motif) ligand 4 | 6591 | -0.009 | 0.4033 | No |
| 13 | CALM2 | CALM2 Entrez, Source | calmodulin 2 (phosphorylase kinase, delta) | 7147 | -0.017 | 0.3693 | No |
| 14 | PLCG1 | PLCG1 Entrez, Source | phospholipase C, gamma 1 | 7527 | -0.023 | 0.3511 | No |
| 15 | CCR5 | CCR5 Entrez, Source | chemokine (C-C motif) receptor 5 | 7641 | -0.025 | 0.3537 | No |
| 16 | CALM1 | CALM1 Entrez, Source | calmodulin 1 (phosphorylase kinase, delta) | 10213 | -0.071 | 0.1922 | No |
| 17 | PRKCB1 | PRKCB1 Entrez, Source | protein kinase C, beta 1 | 11192 | -0.096 | 0.1613 | No |
