Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | CELL_GROWTH_AND_OR_MAINTENANCE |
| Enrichment Score (ES) | 0.59347713 |
| Normalized Enrichment Score (NES) | 1.8363444 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.020156682 |
| FWER p-Value | 0.887 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 9 | 0.936 | 0.1745 | Yes |
| 2 | CTGF | CTGF Entrez, Source | connective tissue growth factor | 27 | 0.757 | 0.3148 | Yes |
| 3 | COL5A2 | COL5A2 Entrez, Source | collagen, type V, alpha 2 | 34 | 0.714 | 0.4478 | Yes |
| 4 | IER3 | IER3 Entrez, Source | immediate early response 3 | 392 | 0.264 | 0.4703 | Yes |
| 5 | RASD1 | RASD1 Entrez, Source | RAS, dexamethasone-induced 1 | 606 | 0.206 | 0.4928 | Yes |
| 6 | IL6R | IL6R Entrez, Source | interleukin 6 receptor | 761 | 0.176 | 0.5141 | Yes |
| 7 | ERBB2 | ERBB2 Entrez, Source | v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) | 916 | 0.154 | 0.5314 | Yes |
| 8 | CXCL1 | CXCL1 Entrez, Source | chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) | 1041 | 0.142 | 0.5486 | Yes |
| 9 | PPAP2B | PPAP2B Entrez, Source | phosphatidic acid phosphatase type 2B | 1114 | 0.135 | 0.5685 | Yes |
| 10 | PCOLCE | PCOLCE Entrez, Source | procollagen C-endopeptidase enhancer | 1214 | 0.126 | 0.5847 | Yes |
| 11 | GPC3 | GPC3 Entrez, Source | glypican 3 | 1656 | 0.100 | 0.5701 | Yes |
| 12 | JAK3 | JAK3 Entrez, Source | Janus kinase 3 (a protein tyrosine kinase, leukocyte) | 2008 | 0.085 | 0.5596 | Yes |
| 13 | OS-9 | 2092 | 0.081 | 0.5686 | Yes | ||
| 14 | HPN | HPN Entrez, Source | hepsin (transmembrane protease, serine 1) | 2141 | 0.079 | 0.5798 | Yes |
| 15 | GNA12 | GNA12 Entrez, Source | guanine nucleotide binding protein (G protein) alpha 12 | 2156 | 0.079 | 0.5935 | Yes |
| 16 | TACC3 | TACC3 Entrez, Source | transforming, acidic coiled-coil containing protein 3 | 2708 | 0.062 | 0.5637 | No |
| 17 | EXTL3 | EXTL3 Entrez, Source | exostoses (multiple)-like 3 | 3040 | 0.053 | 0.5489 | No |
| 18 | RHCG | RHCG Entrez, Source | Rh family, C glycoprotein | 3194 | 0.050 | 0.5467 | No |
| 19 | PPAP2A | PPAP2A Entrez, Source | phosphatidic acid phosphatase type 2A | 3216 | 0.049 | 0.5543 | No |
| 20 | SMO | SMO Entrez, Source | smoothened homolog (Drosophila) | 3242 | 0.049 | 0.5615 | No |
| 21 | TFF1 | TFF1 Entrez, Source | trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) | 4648 | 0.021 | 0.4598 | No |
| 22 | INHBA | INHBA Entrez, Source | inhibin, beta A (activin A, activin AB alpha polypeptide) | 5081 | 0.014 | 0.4299 | No |
| 23 | DUSP12 | DUSP12 Entrez, Source | dual specificity phosphatase 12 | 5220 | 0.011 | 0.4216 | No |
| 24 | LECT1 | LECT1 Entrez, Source | leukocyte cell derived chemotaxin 1 | 6122 | -0.002 | 0.3543 | No |
| 25 | TRPM1 | TRPM1 Entrez, Source | transient receptor potential cation channel, subfamily M, member 1 | 6566 | -0.009 | 0.3226 | No |
| 26 | CCL4 | CCL4 Entrez, Source | chemokine (C-C motif) ligand 4 | 6591 | -0.009 | 0.3224 | No |
| 27 | LGALS7 | LGALS7 Entrez, Source | lectin, galactoside-binding, soluble, 7 (galectin 7) | 6899 | -0.014 | 0.3019 | No |
| 28 | FGF5 | FGF5 Entrez, Source | fibroblast growth factor 5 | 6936 | -0.014 | 0.3018 | No |
| 29 | GATA2 | GATA2 Entrez, Source | GATA binding protein 2 | 7313 | -0.020 | 0.2773 | No |
| 30 | ANGPT2 | ANGPT2 Entrez, Source | angiopoietin 2 | 7458 | -0.022 | 0.2705 | No |
| 31 | QSCN6 | QSCN6 Entrez, Source | quiescin Q6 | 7929 | -0.030 | 0.2407 | No |
| 32 | STMN1 | STMN1 Entrez, Source | stathmin 1/oncoprotein 18 | 10649 | -0.081 | 0.0515 | No |
| 33 | NF1 | NF1 Entrez, Source | neurofibromin 1 (neurofibromatosis, von Recklinghausen disease, Watson disease) | 10739 | -0.084 | 0.0605 | No |
| 34 | EIF3S6 | EIF3S6 Entrez, Source | eukaryotic translation initiation factor 3, subunit 6 48kDa | 10822 | -0.086 | 0.0704 | No |
| 35 | INSR | INSR Entrez, Source | insulin receptor | 11168 | -0.095 | 0.0622 | No |
| 36 | PLAU | PLAU Entrez, Source | plasminogen activator, urokinase | 11891 | -0.121 | 0.0306 | No |
| 37 | DNAJA3 | DNAJA3 Entrez, Source | DnaJ (Hsp40) homolog, subfamily A, member 3 | 11979 | -0.125 | 0.0475 | No |
| 38 | DDX1 | DDX1 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 | 12162 | -0.135 | 0.0591 | No |
| 39 | MTM1 | MTM1 Entrez, Source | myotubularin 1 | 12542 | -0.158 | 0.0601 | No |
