Details for gene set CMV_ALL

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	CMV_ALL_DN
Enrichment Score (ES)	0.566964
Normalized Enrichment Score (NES)	1.9310943
Nominal p-value	0.0
FDR q-value	0.009009063
FWER p-Value	0.473

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL1A2	COL1A2 Entrez, Source	collagen, type I, alpha 2	6	1.154	0.1151	Yes
2	ANXA1	ANXA1 Entrez, Source	annexin A1	11	0.884	0.2033	Yes
3	COL3A1	COL3A1 Entrez, Source	collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)	21	0.785	0.2813	Yes
4	COL5A2	COL5A2 Entrez, Source	collagen, type V, alpha 2	34	0.714	0.3518	Yes
5	SERPINE1	SERPINE1 Entrez, Source	serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	56	0.628	0.4131	Yes
6	ADM	ADM Entrez, Source	adrenomedullin	96	0.523	0.4625	Yes
7	CFD	CFD Entrez, Source	complement factor D (adipsin)	228	0.365	0.4892	Yes
8	TIMP3	TIMP3 Entrez, Source	TIMP metallopeptidase inhibitor 3 (Sorsby fundus dystrophy, pseudoinflammatory)	329	0.291	0.5108	Yes
9	LAMB2	LAMB2 Entrez, Source	laminin, beta 2 (laminin S)	433	0.249	0.5280	Yes
10	COL6A2	COL6A2 Entrez, Source	collagen, type VI, alpha 2	658	0.195	0.5307	Yes
11	COL1A1	COL1A1 Entrez, Source	collagen, type I, alpha 1	673	0.190	0.5487	Yes
12	IGF2	IGF2 Entrez, Source	insulin-like growth factor 2 (somatomedin A)	682	0.188	0.5670	Yes
13	SULT1E1	SULT1E1 Entrez, Source	sulfotransferase family 1E, estrogen-preferring, member 1	908	0.156	0.5656	No
14	EPO	EPO Entrez, Source	erythropoietin	1235	0.125	0.5535	No
15	BMP4	BMP4 Entrez, Source	bone morphogenetic protein 4	1506	0.108	0.5440	No
16	HSD17B2	HSD17B2 Entrez, Source	hydroxysteroid (17-beta) dehydrogenase 2	1528	0.107	0.5531	No
17	DDR2	DDR2 Entrez, Source	discoidin domain receptor family, member 2	1598	0.103	0.5582	No
18	RALGDS	RALGDS Entrez, Source	ral guanine nucleotide dissociation stimulator	1715	0.097	0.5591	No
19	IGFBP2	IGFBP2 Entrez, Source	insulin-like growth factor binding protein 2, 36kDa	1859	0.090	0.5574	No
20	CEBPD	CEBPD Entrez, Source	CCAAT/enhancer binding protein (C/EBP), delta	1977	0.086	0.5571	No
21	ACTA2	ACTA2 Entrez, Source	actin, alpha 2, smooth muscle, aorta	2074	0.082	0.5581	No
22	IGF1R	IGF1R Entrez, Source	insulin-like growth factor 1 receptor	2201	0.077	0.5564	No
23	ZFP36L1	ZFP36L1 Entrez, Source	zinc finger protein 36, C3H type-like 1	2445	0.070	0.5450	No
24	AR	AR Entrez, Source	androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease)	2477	0.069	0.5495	No
25	CCND1	CCND1 Entrez, Source	cyclin D1	2668	0.063	0.5416	No
26	SGCG	SGCG Entrez, Source	sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)	2905	0.057	0.5295	No
27	TGFBR3	TGFBR3 Entrez, Source	transforming growth factor, beta receptor III (betaglycan, 300kDa)	3034	0.054	0.5252	No
28	ACO1	ACO1 Entrez, Source	aconitase 1, soluble	3097	0.052	0.5257	No
29	HNMT	HNMT Entrez, Source	histamine N-methyltransferase	3098	0.052	0.5309	No
30	CXCR7	CXCR7 Entrez, Source	chemokine (C-X-C motif) receptor 7	3953	0.034	0.4699	No
31	CHN1	CHN1 Entrez, Source	chimerin (chimaerin) 1	4021	0.032	0.4681	No
32	FGF7	FGF7 Entrez, Source	fibroblast growth factor 7 (keratinocyte growth factor)	4156	0.030	0.4611	No
33	RAB13	RAB13 Entrez, Source	RAB13, member RAS oncogene family	4159	0.030	0.4639	No
34	IGFBP5	IGFBP5 Entrez, Source	insulin-like growth factor binding protein 5	4507	0.023	0.4401	No
35	PTGIS	PTGIS Entrez, Source	prostaglandin I2 (prostacyclin) synthase	4653	0.021	0.4312	No
36	TNFRSF1A	TNFRSF1A Entrez, Source	tumor necrosis factor receptor superfamily, member 1A	4825	0.018	0.4202	No
37	NR3C1	NR3C1 Entrez, Source	nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	5227	0.011	0.3911	No
38	CXCL12	CXCL12 Entrez, Source	chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)	5302	0.010	0.3865	No
39	MAPK14	MAPK14 Entrez, Source	mitogen-activated protein kinase 14	5554	0.007	0.3683	No
40	NR2F2	NR2F2 Entrez, Source	nuclear receptor subfamily 2, group F, member 2	5565	0.006	0.3681	No
41	ENG	ENG Entrez, Source	endoglin (Osler-Rendu-Weber syndrome 1)	5761	0.003	0.3538	No
42	WEE1	WEE1 Entrez, Source	WEE1 homolog (S. pombe)	5905	0.001	0.3431	No
43	ACVR2A	ACVR2A Entrez, Source	activin A receptor, type IIA	5960	0.001	0.3391	No
44	PDGFRA	PDGFRA Entrez, Source	platelet-derived growth factor receptor, alpha polypeptide	6101	-0.002	0.3287	No
45	MATK	MATK Entrez, Source	megakaryocyte-associated tyrosine kinase	6298	-0.005	0.3144	No
46	BCL2	BCL2 Entrez, Source	B-cell CLL/lymphoma 2	6363	-0.006	0.3102	No
47	CRHBP	CRHBP Entrez, Source	corticotropin releasing hormone binding protein	6512	-0.008	0.2998	No
48	THBS2	THBS2 Entrez, Source	thrombospondin 2	6731	-0.011	0.2845	No
49	ANPEP	ANPEP Entrez, Source	alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)	6961	-0.014	0.2687	No
50	CDH11	CDH11 Entrez, Source	cadherin 11, type 2, OB-cadherin (osteoblast)	7101	-0.017	0.2599	No
51	TPM1	TPM1 Entrez, Source	tropomyosin 1 (alpha)	7114	-0.017	0.2607	No
52	HIVEP2	HIVEP2 Entrez, Source	human immunodeficiency virus type I enhancer binding protein 2	7650	-0.025	0.2229	No
53	CYP1B1	CYP1B1 Entrez, Source	cytochrome P450, family 1, subfamily B, polypeptide 1	7989	-0.031	0.2005	No
54	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	8124	-0.033	0.1937	No
55	ANP32A	ANP32A Entrez, Source	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	8654	-0.041	0.1579	No
56	C1R	C1R Entrez, Source	complement component 1, r subcomponent	8819	-0.044	0.1500	No
57	MARCKS	MARCKS Entrez, Source	myristoylated alanine-rich protein kinase C substrate	8955	-0.047	0.1445	No
58	CSPG2	CSPG2 Entrez, Source	chondroitin sulfate proteoglycan 2 (versican)	9690	-0.060	0.0951	No
59	AHR	AHR Entrez, Source	aryl hydrocarbon receptor	9715	-0.060	0.0994	No
60	CDC25B	CDC25B Entrez, Source	cell division cycle 25B	9872	-0.064	0.0940	No
61	ZCCHC9	ZCCHC9 Entrez, Source	zinc finger, CCHC domain containing 9	9937	-0.065	0.0957	No
62	PAFAH1B1	PAFAH1B1 Entrez, Source	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa	10930	-0.089	0.0298	No
63	PABPC1	PABPC1 Entrez, Source	poly(A) binding protein, cytoplasmic 1	11058	-0.092	0.0295	No
64	ITSN1	ITSN1 Entrez, Source	intersectin 1 (SH3 domain protein)	11216	-0.096	0.0273	No
65	ADRA2A	ADRA2A Entrez, Source	adrenergic, alpha-2A-, receptor	11237	-0.097	0.0354	No
66	RUNX1	RUNX1 Entrez, Source	runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene)	11329	-0.100	0.0386	No
67	MYH9	MYH9 Entrez, Source	myosin, heavy chain 9, non-muscle	11636	-0.111	0.0266	No
68	DDIT4	DDIT4 Entrez, Source	DNA-damage-inducible transcript 4	11645	-0.111	0.0371	No
69	TSPAN6	TSPAN6 Entrez, Source	tetraspanin 6	12255	-0.140	0.0052	No
70	AARS	AARS Entrez, Source	alanyl-tRNA synthetase	12282	-0.141	0.0174	No
71	ID2	ID2 Entrez, Source	inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	12777	-0.181	-0.0016	No
72	GPX1	GPX1 Entrez, Source	glutathione peroxidase 1	12783	-0.183	0.0163	No
73	MBL2	MBL2 Entrez, Source	mannose-binding lectin (protein C) 2, soluble (opsonic defect)	13116	-0.257	0.0170	No