Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_48h |
| GeneSet | CMV_IE86_UP |
| Enrichment Score (ES) | -0.6387039 |
| Normalized Enrichment Score (NES) | -1.893574 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.024851587 |
| FWER p-Value | 0.499 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | BARD1 | BARD1 Entrez, Source | BRCA1 associated RING domain 1 | 1344 | 0.117 | -0.0553 | No |
| 2 | BTG3 | BTG3 Entrez, Source | BTG family, member 3 | 2663 | 0.063 | -0.1295 | No |
| 3 | PTTG1 | PTTG1 Entrez, Source | pituitary tumor-transforming 1 | 2806 | 0.060 | -0.1167 | No |
| 4 | CASP3 | CASP3 Entrez, Source | caspase 3, apoptosis-related cysteine peptidase | 3300 | 0.047 | -0.1352 | No |
| 5 | POLD3 | POLD3 Entrez, Source | polymerase (DNA-directed), delta 3, accessory subunit | 4225 | 0.029 | -0.1933 | No |
| 6 | MSH2 | MSH2 Entrez, Source | mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) | 4414 | 0.025 | -0.1975 | No |
| 7 | KIAA0101 | KIAA0101 Entrez, Source | KIAA0101 | 4903 | 0.017 | -0.2276 | No |
| 8 | TMEM106C | TMEM106C Entrez, Source | transmembrane protein 106C | 5202 | 0.012 | -0.2454 | No |
| 9 | FOXM1 | FOXM1 Entrez, Source | forkhead box M1 | 5399 | 0.009 | -0.2567 | No |
| 10 | CSPG5 | CSPG5 Entrez, Source | chondroitin sulfate proteoglycan 5 (neuroglycan C) | 6076 | -0.001 | -0.3070 | No |
| 11 | CCNE1 | CCNE1 Entrez, Source | cyclin E1 | 6092 | -0.002 | -0.3076 | No |
| 12 | DHFR | DHFR Entrez, Source | dihydrofolate reductase | 6938 | -0.014 | -0.3655 | No |
| 13 | H2AFX | H2AFX Entrez, Source | H2A histone family, member X | 7594 | -0.024 | -0.4053 | No |
| 14 | RAB27A | RAB27A Entrez, Source | RAB27A, member RAS oncogene family | 7609 | -0.024 | -0.3968 | No |
| 15 | UMPS | UMPS Entrez, Source | uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5'-decarboxylase) | 10783 | -0.085 | -0.6019 | Yes |
| 16 | PCNA | PCNA Entrez, Source | proliferating cell nuclear antigen | 11131 | -0.094 | -0.5912 | Yes |
| 17 | UNG | UNG Entrez, Source | uracil-DNA glycosylase | 11765 | -0.116 | -0.5935 | Yes |
| 18 | TFAM | TFAM Entrez, Source | transcription factor A, mitochondrial | 12117 | -0.133 | -0.5679 | Yes |
| 19 | TYMS | TYMS Entrez, Source | thymidylate synthetase | 12217 | -0.137 | -0.5216 | Yes |
| 20 | RFC2 | RFC2 Entrez, Source | replication factor C (activator 1) 2, 40kDa | 12251 | -0.140 | -0.4694 | Yes |
| 21 | RFC3 | RFC3 Entrez, Source | replication factor C (activator 1) 3, 38kDa | 12846 | -0.192 | -0.4389 | Yes |
| 22 | SLC29A1 | SLC29A1 Entrez, Source | solute carrier family 29 (nucleoside transporters), member 1 | 12934 | -0.205 | -0.3652 | Yes |
| 23 | MCM7 | MCM7 Entrez, Source | MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) | 13021 | -0.223 | -0.2844 | Yes |
| 24 | NASP | NASP Entrez, Source | nuclear autoantigenic sperm protein (histone-binding) | 13031 | -0.226 | -0.1966 | Yes |
| 25 | DCK | DCK Entrez, Source | deoxycytidine kinase | 13118 | -0.258 | -0.1020 | Yes |
| 26 | MCM6 | MCM6 Entrez, Source | MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) | 13204 | -0.304 | 0.0104 | Yes |
