Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | CROONQUIST_RAS_STROMA_DN |
| Enrichment Score (ES) | 0.8908973 |
| Normalized Enrichment Score (NES) | 2.2643485 |
| Nominal p-value | 0.0 |
| FDR q-value | 3.31428E-4 |
| FWER p-Value | 0.0020 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | IGFBP7 | IGFBP7 Entrez, Source | insulin-like growth factor binding protein 7 | 2 | 1.254 | 0.2124 | Yes |
| 2 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 6 | 1.154 | 0.4076 | Yes |
| 3 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 9 | 0.936 | 0.5662 | Yes |
| 4 | CTGF | CTGF Entrez, Source | connective tissue growth factor | 27 | 0.757 | 0.6931 | Yes |
| 5 | GJA1 | GJA1 Entrez, Source | gap junction protein, alpha 1, 43kDa (connexin 43) | 173 | 0.414 | 0.7524 | Yes |
| 6 | TMSB4X | TMSB4X Entrez, Source | thymosin, beta 4, X-linked | 315 | 0.295 | 0.7918 | Yes |
| 7 | SPARC | SPARC Entrez, Source | secreted protein, acidic, cysteine-rich (osteonectin) | 317 | 0.293 | 0.8414 | Yes |
| 8 | IGFBP3 | IGFBP3 Entrez, Source | insulin-like growth factor binding protein 3 | 571 | 0.212 | 0.8583 | Yes |
| 9 | NUPR1 | NUPR1 Entrez, Source | - | 603 | 0.206 | 0.8909 | Yes |
| 10 | DUSP1 | DUSP1 Entrez, Source | dual specificity phosphatase 1 | 1261 | 0.123 | 0.8624 | No |
| 11 | SULF1 | SULF1 Entrez, Source | sulfatase 1 | 1955 | 0.087 | 0.8251 | No |
| 12 | ACTA2 | ACTA2 Entrez, Source | actin, alpha 2, smooth muscle, aorta | 2074 | 0.082 | 0.8302 | No |
| 13 | IL6 | IL6 Entrez, Source | interleukin 6 (interferon, beta 2) | 3854 | 0.036 | 0.7027 | No |
| 14 | TGFBI | TGFBI Entrez, Source | transforming growth factor, beta-induced, 68kDa | 5439 | 0.008 | 0.5852 | No |
| 15 | CD81 | CD81 Entrez, Source | CD81 molecule | 6049 | -0.001 | 0.5396 | No |
| 16 | NR4A2 | NR4A2 Entrez, Source | nuclear receptor subfamily 4, group A, member 2 | 8840 | -0.044 | 0.3378 | No |
