Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_48h |
| GeneSet | CYTOPLASMIC_VESICLE_MEMBRANE |
| Enrichment Score (ES) | -0.44518197 |
| Normalized Enrichment Score (NES) | -1.2757983 |
| Nominal p-value | 0.16916488 |
| FDR q-value | 0.5197812 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | ICA1 | ICA1 Entrez, Source | islet cell autoantigen 1, 69kDa | 1223 | 0.126 | -0.0290 | No |
| 2 | DMBT1 | DMBT1 Entrez, Source | deleted in malignant brain tumors 1 | 1508 | 0.108 | 0.0035 | No |
| 3 | PAMCI | PAMCI Entrez, Source | peptidylglycine alpha-amidating monooxygenase COOH-terminal interactor | 1713 | 0.097 | 0.0366 | No |
| 4 | NECAP2 | NECAP2 Entrez, Source | NECAP endocytosis associated 2 | 1736 | 0.096 | 0.0827 | No |
| 5 | LAMP2 | LAMP2 Entrez, Source | lysosomal-associated membrane protein 2 | 1744 | 0.095 | 0.1298 | No |
| 6 | AP1GBP1 | AP1GBP1 Entrez, Source | AP1 gamma subunit binding protein 1 | 1896 | 0.089 | 0.1628 | No |
| 7 | SELP | SELP Entrez, Source | selectin P (granule membrane protein 140kDa, antigen CD62) | 2789 | 0.060 | 0.1261 | No |
| 8 | AP2S1 | AP2S1 Entrez, Source | adaptor-related protein complex 2, sigma 1 subunit | 3175 | 0.050 | 0.1222 | No |
| 9 | COPB2 | COPB2 Entrez, Source | coatomer protein complex, subunit beta 2 (beta prime) | 4784 | 0.019 | 0.0108 | No |
| 10 | ARCN1 | ARCN1 Entrez, Source | archain 1 | 5640 | 0.005 | -0.0508 | No |
| 11 | CSPG5 | CSPG5 Entrez, Source | chondroitin sulfate proteoglycan 5 (neuroglycan C) | 6076 | -0.001 | -0.0829 | No |
| 12 | TMED10 | TMED10 Entrez, Source | transmembrane emp24-like trafficking protein 10 (yeast) | 6987 | -0.015 | -0.1437 | No |
| 13 | CUZD1 | CUZD1 Entrez, Source | CUB and zona pellucida-like domains 1 | 7509 | -0.023 | -0.1716 | No |
| 14 | COPB1 | COPB1 Entrez, Source | coatomer protein complex, subunit beta 1 | 8387 | -0.037 | -0.2189 | No |
| 15 | COPA | COPA Entrez, Source | coatomer protein complex, subunit alpha | 8614 | -0.041 | -0.2155 | No |
| 16 | COPG | COPG Entrez, Source | coatomer protein complex, subunit gamma | 9332 | -0.053 | -0.2428 | No |
| 17 | TMED2 | TMED2 Entrez, Source | transmembrane emp24 domain trafficking protein 2 | 9762 | -0.061 | -0.2445 | No |
| 18 | ECE2 | ECE2 Entrez, Source | endothelin converting enzyme 2 | 9842 | -0.063 | -0.2189 | No |
| 19 | EGFR | EGFR Entrez, Source | epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) | 12857 | -0.193 | -0.3489 | Yes |
| 20 | KIF1B | KIF1B Entrez, Source | kinesin family member 1B | 13231 | -0.325 | -0.2144 | Yes |
| 21 | ABCC4 | ABCC4 Entrez, Source | ATP-binding cassette, sub-family C (CFTR/MRP), member 4 | 13299 | -0.446 | 0.0032 | Yes |
