Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_48h.class.cls
#double_gel_8d_versus_double_gel_48h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in classdouble_gel_48h
GeneSetGCCATNTTG_V$YY1_Q6
Enrichment Score (ES)-0.2929433
Normalized Enrichment Score (NES)-1.2538767
Nominal p-value0.052173913
FDR q-value0.52804744
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GCCATNTTG_V$YY1_Q6   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CCND2CCND2
Entrez,  Source
cyclin D2100.8850.0532No
2RAPGEF4RAPGEF4
Entrez,  Source
Rap guanine nucleotide exchange factor (GEF) 4660.6000.0855No
3NCDNNCDN
Entrez,  Source
neurochondrin3580.2770.0803No
4FOXP1FOXP1
Entrez,  Source
forkhead box P13750.2700.0956No
5WSB1WSB1
Entrez,  Source
WD repeat and SOCS box-containing 14500.2450.1049No
6POU2F1POU2F1
Entrez,  Source
POU domain, class 2, transcription factor 17970.1700.0889No
7GNAI2GNAI2
Entrez,  Source
guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 29310.1530.0881No
8SCRN1SCRN1
Entrez,  Source
secernin 110230.1450.0901No
9LPHN1LPHN1
Entrez,  Source
latrophilin 110240.1450.0989No
10TGIFTGIF
Entrez,  Source
TGFB-induced factor (TALE family homeobox)10940.1370.1020No
11TAX1BP3TAX1BP3
Entrez,  Source
Tax1 (human T-cell leukemia virus type I) binding protein 311660.1310.1046No
12ABHD1ABHD1
Entrez,  Source
abhydrolase domain containing 111750.1300.1119No
13SNX17SNX17
Entrez,  Source
sorting nexin 1712660.1220.1125No
14APBB1APBB1
Entrez,  Source
amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)16060.1020.0930No
15PPP2CAPPP2CA
Entrez,  Source
protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform16270.1010.0977No
16CACNB2CACNB2
Entrez,  Source
calcium channel, voltage-dependent, beta 2 subunit17640.0950.0931No
17DUSP7DUSP7
Entrez,  Source
dual specificity phosphatase 717680.0940.0986No
18SFXN1SFXN1
Entrez,  Source
sideroflexin 118420.0910.0986No
19IDH3GIDH3G
Entrez,  Source
isocitrate dehydrogenase 3 (NAD+) gamma19070.0880.0991No
20FKRPFKRP
Entrez,  Source
fukutin related protein19200.0880.1036No
21WASLWASL
Entrez,  Source
Wiskott-Aldrich syndrome-like19980.0850.1029No
22DSCAMDSCAM
Entrez,  Source
Down syndrome cell adhesion molecule20850.0810.1013No
23OTX2OTX2
Entrez,  Source
orthodenticle homolog 2 (Drosophila)21730.0780.0995No
24COX8ACOX8A
Entrez,  Source
cytochrome c oxidase subunit 8A (ubiquitous)21900.0780.1030No
25DZIP1DZIP1
Entrez,  Source
DAZ interacting protein 122290.0760.1048No
26UQCRHUQCRH
Entrez,  Source
ubiquinol-cytochrome c reductase hinge protein23810.0710.0976No
27PITX1PITX1
Entrez,  Source
paired-like homeodomain transcription factor 124460.0690.0970No
28ING3ING3
Entrez,  Source
inhibitor of growth family, member 324580.0690.1004No
29VIL2VIL2
Entrez,  Source
villin 2 (ezrin)24590.0690.1046No
30CDKN1BCDKN1B
Entrez,  Source
cyclin-dependent kinase inhibitor 1B (p27, Kip1)24990.0680.1058No
31SLC6A1SLC6A1
Entrez,  Source
solute carrier family 6 (neurotransmitter transporter, GABA), member 125670.0660.1047No
32HSF1HSF1
Entrez,  Source
heat shock transcription factor 126410.0640.1030No
33COX7BCOX7B
Entrez,  Source
cytochrome c oxidase subunit VIIb27480.0610.0987No
34AGPAT1AGPAT1
Entrez,  Source
1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)28130.0600.0975No
35MPDU1MPDU1
Entrez,  Source
mannose-P-dolichol utilization defect 128390.0590.0992No
36CD4CD4
Entrez,  Source
CD4 molecule29210.0570.0965No
37AIPAIP
Entrez,  Source
aryl hydrocarbon receptor interacting protein29310.0570.0993No
38NUDT3NUDT3
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 330990.0520.0897No
39MLL5MLL5
Entrez,  Source
myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)33530.0460.0733No
40UBAP1UBAP1
Entrez,  Source
ubiquitin associated protein 134850.0430.0660No
41NCOA6NCOA6
Entrez,  Source
nuclear receptor coactivator 635270.0420.0655No
42TCF4TCF4
Entrez,  Source
transcription factor 436280.0400.0603No
43HOXA2HOXA2
Entrez,  Source
homeobox A237290.0380.0550No
44THRAP4THRAP4
Entrez,  Source
thyroid hormone receptor associated protein 438220.0360.0503No
45ATF4ATF4
Entrez,  Source
activating transcription factor 4 (tax-responsive enhancer element B67)38610.0350.0495No
46ZFP37ZFP37
Entrez,  Source
zinc finger protein 37 homolog (mouse)38910.0350.0494No
47BAMBIBAMBI
Entrez,  Source
BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)39450.0340.0475No
48DGCR2DGCR2
Entrez,  Source
DiGeorge syndrome critical region gene 239820.0330.0468No
49TIA1TIA1
Entrez,  Source
TIA1 cytotoxic granule-associated RNA binding protein40460.0320.0439No
50ATP6V0CATP6V0C
Entrez,  Source
ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c40830.0310.0431No
51RAB5ARAB5A
Entrez,  Source
RAB5A, member RAS oncogene family42180.0290.0347No
52RBMS1RBMS1
Entrez,  Source
RNA binding motif, single stranded interacting protein 143220.0270.0285No
53SHANK2SHANK2
Entrez,  Source
SH3 and multiple ankyrin repeat domains 243340.0270.0293No
54MAEAMAEA
Entrez,  Source
macrophage erythroblast attacher43930.0260.0264No
55BTRCBTRC
Entrez,  Source
beta-transducin repeat containing43960.0250.0278No
56TSC1TSC1
Entrez,  Source
tuberous sclerosis 144770.0240.0232No
57RAB4BRAB4B
Entrez,  Source
RAB4B, member RAS oncogene family44790.0240.0246No
58RAB1ARAB1A
Entrez,  Source
RAB1A, member RAS oncogene family46110.0210.0159No
59SFRS5SFRS5
Entrez,  Source
splicing factor, arginine/serine-rich 547250.0200.0085No
60NFYANFYA
Entrez,  Source
nuclear transcription factor Y, alpha48330.0180.0015No
61RUFY1RUFY1
Entrez,  Source
RUN and FYVE domain containing 149140.017-0.0036No
62NR2C2NR2C2
Entrez,  Source
nuclear receptor subfamily 2, group C, member 249230.016-0.0032No
63PIAS3PIAS3
Entrez,  Source
protein inhibitor of activated STAT, 349430.016-0.0037No
64UBCUBC
Entrez,  Source
ubiquitin C49540.016-0.0035No
65USF1USF1
Entrez,  Source
upstream transcription factor 149800.015-0.0044No
66MARK3MARK3
Entrez,  Source
MAP/microtubule affinity-regulating kinase 350750.014-0.0107No
67ARF1ARF1
Entrez,  Source
ADP-ribosylation factor 151490.012-0.0155No
68PFN2PFN2
Entrez,  Source
profilin 254910.007-0.0410No
69ADKADK
Entrez,  Source
adenosine kinase56200.005-0.0504No
70ARCN1ARCN1
Entrez,  Source
archain 156400.005-0.0515No
71ENSAENSA
Entrez,  Source
endosulfine alpha57490.003-0.0595No
72MTMR3MTMR3
Entrez,  Source
myotubularin related protein 357820.003-0.0618No
73MAP2K5MAP2K5
Entrez,  Source
mitogen-activated protein kinase kinase 558870.002-0.0695No
74GRIN2BGRIN2B
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2B6060-0.001-0.0826No
75NAPE-PLDNAPE-PLD
Entrez,  Source
-6144-0.002-0.0887No
76CD164CD164
Entrez,  Source
CD164 molecule, sialomucin6173-0.003-0.0907No
77LYPLA2LYPLA2
Entrez,  Source
lysophospholipase II6266-0.004-0.0974No
78HSPA8HSPA8
Entrez,  Source
heat shock 70kDa protein 86613-0.009-0.1232No
79SP1SP1
Entrez,  Source
Sp1 transcription factor6622-0.009-0.1232No
80L3MBTL2L3MBTL2
Entrez,  Source
l(3)mbt-like 2 (Drosophila)6673-0.010-0.1264No
81PPP2R2APPP2R2A
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform6690-0.011-0.1270No
82RAB10RAB10
Entrez,  Source
RAB10, member RAS oncogene family6696-0.011-0.1267No
83CTCFCTCF
Entrez,  Source
CCCTC-binding factor (zinc finger protein)6862-0.013-0.1384No
84U2AF2U2AF2
Entrez,  Source
U2 small nuclear RNA auxiliary factor 26904-0.014-0.1407No
85RAB28RAB28
Entrez,  Source
RAB28, member RAS oncogene family7029-0.016-0.1492No
86TTC17TTC17
Entrez,  Source
tetratricopeptide repeat domain 177081-0.016-0.1521No
87ATP5F1ATP5F1
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B17135-0.017-0.1550No
88CUGBP1CUGBP1
Entrez,  Source
CUG triplet repeat, RNA binding protein 17294-0.019-0.1659No
89ATRXATRX
Entrez,  Source
alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)7295-0.019-0.1647No
90CLK4CLK4
Entrez,  Source
CDC-like kinase 47341-0.020-0.1669No
91NFYCNFYC
Entrez,  Source
nuclear transcription factor Y, gamma7410-0.021-0.1708No
92USP14USP14
Entrez,  Source
ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)7427-0.021-0.1707No
93PPP1CCPPP1CC
Entrez,  Source
protein phosphatase 1, catalytic subunit, gamma isoform7701-0.026-0.1898No
94GIT2GIT2
Entrez,  Source
G protein-coupled receptor kinase interactor 27717-0.026-0.1894No
95TAF6TAF6
Entrez,  Source
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa7744-0.027-0.1897No
96HIF1AHIF1A
Entrez,  Source
hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)7751-0.027-0.1886No
97SYT11SYT11
Entrez,  Source
synaptotagmin XI7754-0.027-0.1871No
98EIF2B4EIF2B4
Entrez,  Source
eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa7792-0.027-0.1883No
99ATP5A1ATP5A1
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle7872-0.028-0.1925No
100GNAO1GNAO1
Entrez,  Source
guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O7919-0.029-0.1942No
101RXRBRXRB
Entrez,  Source
retinoid X receptor, beta7930-0.030-0.1932No
102PSMC5PSMC5
Entrez,  Source
proteasome (prosome, macropain) 26S subunit, ATPase, 57944-0.030-0.1924No
103PDE4DPDE4D
Entrez,  Source
phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila)7982-0.030-0.1933No
104NSFNSF
Entrez,  Source
N-ethylmaleimide-sensitive factor8063-0.032-0.1974No
105PHF12PHF12
Entrez,  Source
PHD finger protein 128193-0.034-0.2052No
106DDX17DDX17
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 178274-0.035-0.2091No
107ATP5G1ATP5G1
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)8437-0.038-0.2191No
108PAPOLBPAPOLB
Entrez,  Source
poly(A) polymerase beta (testis specific)8516-0.039-0.2227No
109AP3D1AP3D1
Entrez,  Source
adaptor-related protein complex 3, delta 1 subunit8568-0.040-0.2241No
110EP300EP300
Entrez,  Source
E1A binding protein p3008660-0.041-0.2285No
111AKAP8LAKAP8L
Entrez,  Source
A kinase (PRKA) anchor protein 8-like8707-0.042-0.2294No
112RAGERAGE
Entrez,  Source
renal tumor antigen8769-0.043-0.2314No
113YWHAEYWHAE
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide8841-0.044-0.2341No
114ANAPC4ANAPC4
Entrez,  Source
anaphase promoting complex subunit 48855-0.045-0.2324No
115RBM5RBM5
Entrez,  Source
RNA binding motif protein 58977-0.047-0.2387No
116RPL10RPL10
Entrez,  Source
ribosomal protein L109343-0.053-0.2632No
117NDUFS1NDUFS1
Entrez,  Source
NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)9515-0.056-0.2728No
118SSR4SSR4
Entrez,  Source
signal sequence receptor, delta (translocon-associated protein delta)9596-0.058-0.2753No
119MYST2MYST2
Entrez,  Source
MYST histone acetyltransferase 29642-0.059-0.2752No
120EIF5EIF5
Entrez,  Source
eukaryotic translation initiation factor 59653-0.059-0.2723No
121CAB39LCAB39L
Entrez,  Source
calcium binding protein 39-like9676-0.059-0.2704No
122EIF4G2EIF4G2
Entrez,  Source
eukaryotic translation initiation factor 4 gamma, 29796-0.062-0.2757No
123DDX3XDDX3X
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked9904-0.064-0.2799No
124KCNMA1KCNMA1
Entrez,  Source
potassium large conductance calcium-activated channel, subfamily M, alpha member 110077-0.068-0.2888Yes
125PTBP1PTBP1
Entrez,  Source
polypyrimidine tract binding protein 110104-0.068-0.2866Yes
126RNF12RNF12
Entrez,  Source
ring finger protein 1210162-0.069-0.2867Yes
127PTDSRPTDSR
Entrez,  Source
phosphatidylserine receptor10242-0.071-0.2884Yes
128MRPL11MRPL11
Entrez,  Source
mitochondrial ribosomal protein L1110267-0.072-0.2858Yes
129RBM16RBM16
Entrez,  Source
RNA binding motif protein 1610310-0.073-0.2846Yes
130CELSR3CELSR3
Entrez,  Source
cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)10349-0.074-0.2830Yes
131TBC1D14TBC1D14
Entrez,  Source
TBC1 domain family, member 1410383-0.074-0.2809Yes
132ATF1ATF1
Entrez,  Source
activating transcription factor 110486-0.077-0.2840Yes
133SUMO2SUMO2
Entrez,  Source
SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)10516-0.078-0.2814Yes
134DAP3DAP3
Entrez,  Source
death associated protein 310562-0.079-0.2800Yes
135BTF3BTF3
Entrez,  Source
basic transcription factor 310564-0.079-0.2753Yes
136AKAP8AKAP8
Entrez,  Source
A kinase (PRKA) anchor protein 810573-0.079-0.2710Yes
137MAP4K3MAP4K3
Entrez,  Source
mitogen-activated protein kinase kinase kinase kinase 310588-0.080-0.2673Yes
138AP1G1AP1G1
Entrez,  Source
adaptor-related protein complex 1, gamma 1 subunit10665-0.082-0.2681Yes
139SFRS2SFRS2
Entrez,  Source
splicing factor, arginine/serine-rich 210691-0.082-0.2650Yes
140RPS8RPS8
Entrez,  Source
ribosomal protein S810780-0.085-0.2665Yes
141STRN3STRN3
Entrez,  Source
striatin, calmodulin binding protein 310891-0.088-0.2695Yes
142PAFAH1B1PAFAH1B1
Entrez,  Source
platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa10930-0.089-0.2670Yes
143ING4ING4
Entrez,  Source
inhibitor of growth family, member 411185-0.095-0.2804Yes
144UBA52UBA52
Entrez,  Source
ubiquitin A-52 residue ribosomal protein fusion product 111223-0.096-0.2774Yes
145ATP5G2ATP5G2
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)11226-0.096-0.2717Yes
146SFRS7SFRS7
Entrez,  Source
splicing factor, arginine/serine-rich 7, 35kDa11272-0.098-0.2691Yes
147RPN1RPN1
Entrez,  Source
ribophorin I11310-0.099-0.2659Yes
148LMNB1LMNB1
Entrez,  Source
lamin B111330-0.100-0.2613Yes
149WHSC2WHSC2
Entrez,  Source
Wolf-Hirschhorn syndrome candidate 211360-0.101-0.2573Yes
150METTL3METTL3
Entrez,  Source
methyltransferase like 311454-0.104-0.2580Yes
151LRRC4LRRC4
Entrez,  Source
leucine rich repeat containing 411701-0.113-0.2698Yes
152HNRPCHNRPC
Entrez,  Source
heterogeneous nuclear ribonucleoprotein C (C1/C2)11740-0.115-0.2658Yes
153BOP1BOP1
Entrez,  Source
block of proliferation 111761-0.115-0.2602Yes
154CASC3CASC3
Entrez,  Source
cancer susceptibility candidate 311825-0.118-0.2578Yes
155EIF4A1EIF4A1
Entrez,  Source
eukaryotic translation initiation factor 4A, isoform 111843-0.119-0.2519Yes
156SAFBSAFB
Entrez,  Source
scaffold attachment factor B11983-0.126-0.2548Yes
157RBM10RBM10
Entrez,  Source
RNA binding motif protein 1012015-0.127-0.2494Yes
158FTSJ3FTSJ3
Entrez,  Source
FtsJ homolog 3 (E. coli)12034-0.128-0.2430Yes
159RALARALA
Entrez,  Source
v-ral simian leukemia viral oncogene homolog A (ras related)12043-0.128-0.2357Yes
160RPL35ARPL35A
Entrez,  Source
ribosomal protein L35a12045-0.129-0.2280Yes
161GFERGFER
Entrez,  Source
growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae)12048-0.129-0.2203Yes
162CSNK1A1CSNK1A1
Entrez,  Source
casein kinase 1, alpha 112054-0.129-0.2128Yes
163PCTK2PCTK2
Entrez,  Source
PCTAIRE protein kinase 212183-0.136-0.2142Yes
164UGCGL1UGCGL1
Entrez,  Source
UDP-glucose ceramide glucosyltransferase-like 112203-0.137-0.2073Yes
165TARDBPTARDBP
Entrez,  Source
TAR DNA binding protein12292-0.142-0.2054Yes
166PTMAPTMA
Entrez,  Source
prothymosin, alpha (gene sequence 28)12489-0.154-0.2109Yes
167SFRS10SFRS10
Entrez,  Source
splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila)12549-0.158-0.2057Yes
168ADNPADNP
Entrez,  Source
activity-dependent neuroprotector12610-0.164-0.2003Yes
169HN1HN1
Entrez,  Source
hematological and neurological expressed 112612-0.164-0.1904Yes
170RBM12RBM12
Entrez,  Source
RNA binding motif protein 1212622-0.165-0.1810Yes
171CRKLCRKL
Entrez,  Source
v-crk sarcoma virus CT10 oncogene homolog (avian)-like12628-0.166-0.1713Yes
172EXOC7EXOC7
Entrez,  Source
exocyst complex component 712748-0.178-0.1695Yes
173H1F0H1F0
Entrez,  Source
H1 histone family, member 012841-0.191-0.1649Yes
174PRPSAP2PRPSAP2
Entrez,  Source
phosphoribosyl pyrophosphate synthetase-associated protein 212928-0.204-0.1590Yes
175RBM3RBM3
Entrez,  Source
RNA binding motif (RNP1, RRM) protein 312930-0.204-0.1466Yes
176NASPNASP
Entrez,  Source
nuclear autoantigenic sperm protein (histone-binding)13031-0.226-0.1404Yes
177ILF3ILF3
Entrez,  Source
interleukin enhancer binding factor 3, 90kDa13043-0.231-0.1272Yes
178FUSFUS
Entrez,  Source
fusion (involved in t(12;16) in malignant liposarcoma)13100-0.252-0.1161Yes
179SFPQSFPQ
Entrez,  Source
splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated)13213-0.310-0.1057Yes
180KIF1BKIF1B
Entrez,  Source
kinesin family member 1B13231-0.325-0.0871Yes
181HNRPA1HNRPA1
Entrez,  Source
heterogeneous nuclear ribonucleoprotein A113288-0.411-0.0663Yes
182PSPC1PSPC1
Entrez,  Source
paraspeckle component 113317-0.524-0.0365Yes
183MAT2AMAT2A
Entrez,  Source
methionine adenosyltransferase II, alpha13326-0.6300.0012Yes
Table: GSEA details [plain text format]



Fig 2: GCCATNTTG_V$YY1_Q6   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GCCATNTTG_V$YY1_Q6: Random ES distribution   
Gene set null distribution of ES for GCCATNTTG_V$YY1_Q6