Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_48h |
| GeneSet | GCGSCMNTTT_UNKNOWN |
| Enrichment Score (ES) | -0.540508 |
| Normalized Enrichment Score (NES) | -1.6098922 |
| Nominal p-value | 0.012396694 |
| FDR q-value | 0.13081631 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | POU2F1 | POU2F1 Entrez, Source | POU domain, class 2, transcription factor 1 | 797 | 0.170 | 0.0047 | No |
| 2 | GPC3 | GPC3 Entrez, Source | glypican 3 | 1656 | 0.100 | -0.0219 | No |
| 3 | BCLAF1 | BCLAF1 Entrez, Source | BCL2-associated transcription factor 1 | 1691 | 0.098 | 0.0126 | No |
| 4 | PITX1 | PITX1 Entrez, Source | paired-like homeodomain transcription factor 1 | 2446 | 0.069 | -0.0177 | No |
| 5 | CD4 | CD4 Entrez, Source | CD4 molecule | 2921 | 0.057 | -0.0317 | No |
| 6 | KCNK9 | KCNK9 Entrez, Source | potassium channel, subfamily K, member 9 | 3202 | 0.049 | -0.0340 | No |
| 7 | HOXA2 | HOXA2 Entrez, Source | homeobox A2 | 3729 | 0.038 | -0.0590 | No |
| 8 | RAB1A | RAB1A Entrez, Source | RAB1A, member RAS oncogene family | 4611 | 0.021 | -0.1170 | No |
| 9 | ADK | ADK Entrez, Source | adenosine kinase | 5620 | 0.005 | -0.1907 | No |
| 10 | USP11 | USP11 Entrez, Source | ubiquitin specific peptidase 11 | 6642 | -0.010 | -0.2637 | No |
| 11 | PPP2R2A | PPP2R2A Entrez, Source | protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform | 6690 | -0.011 | -0.2632 | No |
| 12 | RAC1 | RAC1 Entrez, Source | ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) | 6834 | -0.013 | -0.2692 | No |
| 13 | PHF12 | PHF12 Entrez, Source | PHD finger protein 12 | 8193 | -0.034 | -0.3583 | No |
| 14 | DNAJC7 | DNAJC7 Entrez, Source | DnaJ (Hsp40) homolog, subfamily C, member 7 | 9375 | -0.054 | -0.4266 | No |
| 15 | MYST2 | MYST2 Entrez, Source | MYST histone acetyltransferase 2 | 9642 | -0.059 | -0.4243 | No |
| 16 | SFRS2 | SFRS2 Entrez, Source | splicing factor, arginine/serine-rich 2 | 10691 | -0.082 | -0.4718 | No |
| 17 | YARS | YARS Entrez, Source | tyrosyl-tRNA synthetase | 11607 | -0.110 | -0.4989 | Yes |
| 18 | PAICS | PAICS Entrez, Source | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase | 11730 | -0.114 | -0.4647 | Yes |
| 19 | SAFB | SAFB Entrez, Source | scaffold attachment factor B | 11983 | -0.126 | -0.4359 | Yes |
| 20 | NEUROD1 | NEUROD1 Entrez, Source | neurogenic differentiation 1 | 12187 | -0.136 | -0.3995 | Yes |
| 21 | COL27A1 | COL27A1 Entrez, Source | collagen, type XXVII, alpha 1 | 12236 | -0.139 | -0.3505 | Yes |
| 22 | TARDBP | TARDBP Entrez, Source | TAR DNA binding protein | 12292 | -0.142 | -0.3008 | Yes |
| 23 | MCM7 | MCM7 Entrez, Source | MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) | 13021 | -0.223 | -0.2708 | Yes |
| 24 | PPAT | PPAT Entrez, Source | phosphoribosyl pyrophosphate amidotransferase | 13102 | -0.253 | -0.1809 | Yes |
| 25 | PSPC1 | PSPC1 Entrez, Source | paraspeckle component 1 | 13317 | -0.524 | 0.0019 | Yes |
