Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_48h |
| GeneSet | IFN_ALPHA_UP |
| Enrichment Score (ES) | -0.43241695 |
| Normalized Enrichment Score (NES) | -1.2505862 |
| Nominal p-value | 0.17391305 |
| FDR q-value | 0.5263256 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | VEGFC | VEGFC Entrez, Source | vascular endothelial growth factor C | 778 | 0.173 | 0.0276 | No |
| 2 | GMPR | GMPR Entrez, Source | guanosine monophosphate reductase | 1649 | 0.100 | 0.0120 | No |
| 3 | BTG1 | BTG1 Entrez, Source | B-cell translocation gene 1, anti-proliferative | 2629 | 0.064 | -0.0297 | No |
| 4 | COL16A1 | COL16A1 Entrez, Source | collagen, type XVI, alpha 1 | 3530 | 0.042 | -0.0764 | No |
| 5 | IL6 | IL6 Entrez, Source | interleukin 6 (interferon, beta 2) | 3854 | 0.036 | -0.0829 | No |
| 6 | SDCBP | SDCBP Entrez, Source | syndecan binding protein (syntenin) | 4506 | 0.023 | -0.1203 | No |
| 7 | SKP1A | SKP1A Entrez, Source | S-phase kinase-associated protein 1A (p19A) | 4583 | 0.022 | -0.1152 | No |
| 8 | CASP8 | CASP8 Entrez, Source | caspase 8, apoptosis-related cysteine peptidase | 5583 | 0.006 | -0.1872 | No |
| 9 | STAT1 | STAT1 Entrez, Source | signal transducer and activator of transcription 1, 91kDa | 5682 | 0.005 | -0.1923 | No |
| 10 | MX1 | MX1 Entrez, Source | myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) | 7189 | -0.018 | -0.2964 | No |
| 11 | EPS15 | EPS15 Entrez, Source | epidermal growth factor receptor pathway substrate 15 | 7677 | -0.026 | -0.3203 | No |
| 12 | OAS1 | OAS1 Entrez, Source | 2',5'-oligoadenylate synthetase 1, 40/46kDa | 8170 | -0.033 | -0.3406 | No |
| 13 | DDX17 | DDX17 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 | 8274 | -0.035 | -0.3308 | No |
| 14 | PPP3CA | PPP3CA Entrez, Source | protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha) | 8522 | -0.039 | -0.3299 | No |
| 15 | ADAR | ADAR Entrez, Source | adenosine deaminase, RNA-specific | 9289 | -0.052 | -0.3614 | No |
| 16 | IFIT3 | IFIT3 Entrez, Source | interferon-induced protein with tetratricopeptide repeats 3 | 9528 | -0.056 | -0.3512 | No |
| 17 | XRCC6 | XRCC6 Entrez, Source | X-ray repair complementing defective repair in Chinese hamster cells 6 (Ku autoantigen, 70kDa) | 9780 | -0.062 | -0.3395 | No |
| 18 | BBC3 | BBC3 Entrez, Source | BCL2 binding component 3 | 10054 | -0.067 | -0.3265 | No |
| 19 | IRF1 | IRF1 Entrez, Source | interferon regulatory factor 1 | 11466 | -0.105 | -0.3804 | Yes |
| 20 | NMI | NMI Entrez, Source | N-myc (and STAT) interactor | 11644 | -0.111 | -0.3386 | Yes |
| 21 | MAP3K10 | MAP3K10 Entrez, Source | mitogen-activated protein kinase kinase kinase 10 | 12375 | -0.147 | -0.3203 | Yes |
| 22 | MX2 | MX2 Entrez, Source | myxovirus (influenza virus) resistance 2 (mouse) | 12876 | -0.196 | -0.2603 | Yes |
| 23 | FAS | FAS Entrez, Source | Fas (TNF receptor superfamily, member 6) | 13164 | -0.277 | -0.1441 | Yes |
| 24 | BST2 | BST2 Entrez, Source | bone marrow stromal cell antigen 2 | 13220 | -0.317 | 0.0092 | Yes |
