Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_48h |
| GeneSet | IFN_ANY_UP |
| Enrichment Score (ES) | -0.38120633 |
| Normalized Enrichment Score (NES) | -1.3206297 |
| Nominal p-value | 0.09002433 |
| FDR q-value | 0.4334395 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | HADH | HADH Entrez, Source | hydroxyacyl-Coenzyme A dehydrogenase | 566 | 0.213 | 0.0046 | No |
| 2 | VEGFC | VEGFC Entrez, Source | vascular endothelial growth factor C | 778 | 0.173 | 0.0271 | No |
| 3 | AP3M2 | AP3M2 Entrez, Source | adaptor-related protein complex 3, mu 2 subunit | 889 | 0.157 | 0.0538 | No |
| 4 | PHLDA1 | PHLDA1 Entrez, Source | pleckstrin homology-like domain, family A, member 1 | 1221 | 0.126 | 0.0568 | No |
| 5 | PARP4 | PARP4 Entrez, Source | poly (ADP-ribose) polymerase family, member 4 | 1274 | 0.122 | 0.0799 | No |
| 6 | GMPR | GMPR Entrez, Source | guanosine monophosphate reductase | 1649 | 0.100 | 0.0740 | No |
| 7 | BCLAF1 | BCLAF1 Entrez, Source | BCL2-associated transcription factor 1 | 1691 | 0.098 | 0.0926 | No |
| 8 | CEBPD | CEBPD Entrez, Source | CCAAT/enhancer binding protein (C/EBP), delta | 1977 | 0.086 | 0.0902 | No |
| 9 | BTG1 | BTG1 Entrez, Source | B-cell translocation gene 1, anti-proliferative | 2629 | 0.064 | 0.0554 | No |
| 10 | PLAUR | PLAUR Entrez, Source | plasminogen activator, urokinase receptor | 2983 | 0.055 | 0.0410 | No |
| 11 | CTR9 | CTR9 Entrez, Source | Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) | 3465 | 0.044 | 0.0145 | No |
| 12 | COL16A1 | COL16A1 Entrez, Source | collagen, type XVI, alpha 1 | 3530 | 0.042 | 0.0191 | No |
| 13 | IL6 | IL6 Entrez, Source | interleukin 6 (interferon, beta 2) | 3854 | 0.036 | 0.0027 | No |
| 14 | EIF2B1 | EIF2B1 Entrez, Source | eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa | 4466 | 0.024 | -0.0380 | No |
| 15 | SDCBP | SDCBP Entrez, Source | syndecan binding protein (syntenin) | 4506 | 0.023 | -0.0358 | No |
| 16 | SKP1A | SKP1A Entrez, Source | S-phase kinase-associated protein 1A (p19A) | 4583 | 0.022 | -0.0367 | No |
| 17 | EIF2AK2 | EIF2AK2 Entrez, Source | eukaryotic translation initiation factor 2-alpha kinase 2 | 4677 | 0.020 | -0.0391 | No |
| 18 | BAK1 | BAK1 Entrez, Source | BCL2-antagonist/killer 1 | 4939 | 0.016 | -0.0552 | No |
| 19 | PPP5C | PPP5C Entrez, Source | protein phosphatase 5, catalytic subunit | 5131 | 0.013 | -0.0667 | No |
| 20 | PARP1 | PARP1 Entrez, Source | poly (ADP-ribose) polymerase family, member 1 | 5231 | 0.011 | -0.0717 | No |
| 21 | CASP8 | CASP8 Entrez, Source | caspase 8, apoptosis-related cysteine peptidase | 5583 | 0.006 | -0.0967 | No |
| 22 | STAT1 | STAT1 Entrez, Source | signal transducer and activator of transcription 1, 91kDa | 5682 | 0.005 | -0.1031 | No |
| 23 | CALD1 | CALD1 Entrez, Source | caldesmon 1 | 5970 | 0.001 | -0.1246 | No |
| 24 | CSRP3 | CSRP3 Entrez, Source | cysteine and glycine-rich protein 3 (cardiac LIM protein) | 6009 | -0.000 | -0.1274 | No |
| 25 | CD164 | CD164 Entrez, Source | CD164 molecule, sialomucin | 6173 | -0.003 | -0.1391 | No |
| 26 | HADHB | HADHB Entrez, Source | hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit | 6362 | -0.006 | -0.1520 | No |
| 27 | MX1 | MX1 Entrez, Source | myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) | 7189 | -0.018 | -0.2101 | No |
| 28 | EPS15 | EPS15 Entrez, Source | epidermal growth factor receptor pathway substrate 15 | 7677 | -0.026 | -0.2411 | No |
| 29 | HIF1A | HIF1A Entrez, Source | hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | 7751 | -0.027 | -0.2407 | No |
| 30 | OAS1 | OAS1 Entrez, Source | 2',5'-oligoadenylate synthetase 1, 40/46kDa | 8170 | -0.033 | -0.2647 | No |
| 31 | ELF1 | ELF1 Entrez, Source | E74-like factor 1 (ets domain transcription factor) | 8198 | -0.034 | -0.2593 | No |
| 32 | DDX17 | DDX17 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 | 8274 | -0.035 | -0.2571 | No |
| 33 | PPP3CA | PPP3CA Entrez, Source | protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha) | 8522 | -0.039 | -0.2670 | No |
| 34 | ADAR | ADAR Entrez, Source | adenosine deaminase, RNA-specific | 9289 | -0.052 | -0.3130 | No |
| 35 | IFIT3 | IFIT3 Entrez, Source | interferon-induced protein with tetratricopeptide repeats 3 | 9528 | -0.056 | -0.3184 | No |
| 36 | XRCC6 | XRCC6 Entrez, Source | X-ray repair complementing defective repair in Chinese hamster cells 6 (Ku autoantigen, 70kDa) | 9780 | -0.062 | -0.3236 | No |
| 37 | PSME1 | PSME1 Entrez, Source | proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) | 9903 | -0.064 | -0.3185 | No |
| 38 | BBC3 | BBC3 Entrez, Source | BCL2 binding component 3 | 10054 | -0.067 | -0.3148 | No |
| 39 | ICAM1 | ICAM1 Entrez, Source | intercellular adhesion molecule 1 (CD54), human rhinovirus receptor | 10770 | -0.085 | -0.3499 | No |
| 40 | PTPN11 | PTPN11 Entrez, Source | protein tyrosine phosphatase, non-receptor type 11 (Noonan syndrome 1) | 11140 | -0.094 | -0.3568 | No |
| 41 | IRF1 | IRF1 Entrez, Source | interferon regulatory factor 1 | 11466 | -0.105 | -0.3580 | Yes |
| 42 | NMI | NMI Entrez, Source | N-myc (and STAT) interactor | 11644 | -0.111 | -0.3467 | Yes |
| 43 | FOSL1 | FOSL1 Entrez, Source | FOS-like antigen 1 | 11938 | -0.123 | -0.3414 | Yes |
| 44 | DDX1 | DDX1 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 | 12162 | -0.135 | -0.3283 | Yes |
| 45 | VAT1 | VAT1 Entrez, Source | vesicle amine transport protein 1 homolog (T californica) | 12302 | -0.143 | -0.3071 | Yes |
| 46 | MAP3K10 | MAP3K10 Entrez, Source | mitogen-activated protein kinase kinase kinase 10 | 12375 | -0.147 | -0.2799 | Yes |
| 47 | GMFB | GMFB Entrez, Source | glia maturation factor, beta | 12387 | -0.148 | -0.2479 | Yes |
| 48 | EPRS | EPRS Entrez, Source | glutamyl-prolyl-tRNA synthetase | 12557 | -0.159 | -0.2254 | Yes |
| 49 | MX2 | MX2 Entrez, Source | myxovirus (influenza virus) resistance 2 (mouse) | 12876 | -0.196 | -0.2057 | Yes |
| 50 | ZRF1 | ZRF1 Entrez, Source | zuotin related factor 1 | 12936 | -0.206 | -0.1645 | Yes |
| 51 | FAS | FAS Entrez, Source | Fas (TNF receptor superfamily, member 6) | 13164 | -0.277 | -0.1201 | Yes |
| 52 | FUBP1 | FUBP1 Entrez, Source | far upstream element (FUSE) binding protein 1 | 13175 | -0.284 | -0.0578 | Yes |
| 53 | BST2 | BST2 Entrez, Source | bone marrow stromal cell antigen 2 | 13220 | -0.317 | 0.0092 | Yes |
