Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
Upregulated in class | double_gel_8d |
GeneSet | IRITANI_ADPROX_VASC |
Enrichment Score (ES) | 0.6016314 |
Normalized Enrichment Score (NES) | 2.1842916 |
Nominal p-value | 0.0 |
FDR q-value | 4.3921336E-4 |
FWER p-Value | 0.0050 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | COL1A2 | COL1A2 Entrez,  Source | collagen, type I, alpha 2 | 6 | 1.154 | 0.0808 | Yes |
2 | LAMC2 | LAMC2 Entrez,  Source | laminin, gamma 2 | 19 | 0.791 | 0.1357 | Yes |
3 | LDHB | LDHB Entrez,  Source | lactate dehydrogenase B | 22 | 0.785 | 0.1909 | Yes |
4 | CLDN7 | CLDN7 Entrez,  Source | claudin 7 | 24 | 0.780 | 0.2457 | Yes |
5 | PROCR | PROCR Entrez,  Source | protein C receptor, endothelial (EPCR) | 37 | 0.690 | 0.2935 | Yes |
6 | SERPINE1 | SERPINE1 Entrez,  Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 56 | 0.628 | 0.3364 | Yes |
7 | PRNP | PRNP Entrez,  Source | prion protein (p27-30) (Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia) | 141 | 0.455 | 0.3621 | Yes |
8 | CCL2 | CCL2 Entrez,  Source | chemokine (C-C motif) ligand 2 | 145 | 0.452 | 0.3937 | Yes |
9 | BGN | BGN Entrez,  Source | biglycan | 175 | 0.408 | 0.4203 | Yes |
10 | TAGLN | TAGLN Entrez,  Source | transgelin | 250 | 0.344 | 0.4389 | Yes |
11 | RGS10 | RGS10 Entrez,  Source | regulator of G-protein signalling 10 | 370 | 0.272 | 0.4492 | Yes |
12 | IER3 | IER3 Entrez,  Source | immediate early response 3 | 392 | 0.264 | 0.4662 | Yes |
13 | RGS4 | RGS4 Entrez,  Source | regulator of G-protein signalling 4 | 454 | 0.244 | 0.4787 | Yes |
14 | CD59 | CD59 Entrez,  Source | CD59 molecule, complement regulatory protein | 533 | 0.219 | 0.4883 | Yes |
15 | RHOB | RHOB Entrez,  Source | ras homolog gene family, member B | 709 | 0.184 | 0.4881 | Yes |
16 | IGF2BP3 | IGF2BP3 Entrez,  Source | insulin-like growth factor 2 mRNA binding protein 3 | 721 | 0.182 | 0.5001 | Yes |
17 | VEGFC | VEGFC Entrez,  Source | vascular endothelial growth factor C | 778 | 0.173 | 0.5080 | Yes |
18 | LPXN | LPXN Entrez,  Source | leupaxin | 785 | 0.172 | 0.5197 | Yes |
19 | FLT1 | FLT1 Entrez,  Source | fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) | 789 | 0.172 | 0.5316 | Yes |
20 | BTG2 | BTG2 Entrez,  Source | BTG family, member 2 | 880 | 0.159 | 0.5360 | Yes |
21 | ECE1 | ECE1 Entrez,  Source | endothelin converting enzyme 1 | 925 | 0.153 | 0.5435 | Yes |
22 | EIF2B2 | EIF2B2 Entrez,  Source | eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa | 975 | 0.149 | 0.5503 | Yes |
23 | CXCL1 | CXCL1 Entrez,  Source | chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) | 1041 | 0.142 | 0.5554 | Yes |
24 | BASP1 | BASP1 Entrez,  Source | brain abundant, membrane attached signal protein 1 | 1105 | 0.136 | 0.5602 | Yes |
25 | ANXA3 | ANXA3 Entrez,  Source | annexin A3 | 1170 | 0.131 | 0.5646 | Yes |
26 | MT1A | MT1A Entrez,  Source | metallothionein 1A (functional) | 1250 | 0.124 | 0.5673 | Yes |
27 | PKIA | PKIA Entrez,  Source | protein kinase (cAMP-dependent, catalytic) inhibitor alpha | 1340 | 0.117 | 0.5689 | Yes |
28 | AXL | AXL Entrez,  Source | AXL receptor tyrosine kinase | 1373 | 0.115 | 0.5745 | Yes |
29 | ANXA6 | ANXA6 Entrez,  Source | annexin A6 | 1439 | 0.111 | 0.5775 | Yes |
30 | LAMA5 | LAMA5 Entrez,  Source | laminin, alpha 5 | 1466 | 0.110 | 0.5833 | Yes |
31 | TGM2 | TGM2 Entrez,  Source | transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) | 1650 | 0.100 | 0.5765 | Yes |
32 | SLC38A6 | SLC38A6 Entrez,  Source | solute carrier family 38, member 6 | 1678 | 0.098 | 0.5814 | Yes |
33 | UPP1 | UPP1 Entrez,  Source | uridine phosphorylase 1 | 1679 | 0.098 | 0.5883 | Yes |
34 | CAPG | CAPG Entrez,  Source | capping protein (actin filament), gelsolin-like | 1684 | 0.098 | 0.5949 | Yes |
35 | LAMP2 | LAMP2 Entrez,  Source | lysosomal-associated membrane protein 2 | 1744 | 0.095 | 0.5972 | Yes |
36 | ARHGDIB | ARHGDIB Entrez,  Source | Rho GDP dissociation inhibitor (GDI) beta | 1774 | 0.094 | 0.6016 | Yes |
37 | TCN2 | TCN2 Entrez,  Source | transcobalamin II; macrocytic anemia | 1991 | 0.085 | 0.5913 | No |
38 | ACTA2 | ACTA2 Entrez,  Source | actin, alpha 2, smooth muscle, aorta | 2074 | 0.082 | 0.5909 | No |
39 | ATP1B1 | ATP1B1 Entrez,  Source | ATPase, Na+/K+ transporting, beta 1 polypeptide | 2395 | 0.071 | 0.5717 | No |
40 | NISCH | NISCH Entrez,  Source | nischarin | 2568 | 0.066 | 0.5634 | No |
41 | SELP | SELP Entrez,  Source | selectin P (granule membrane protein 140kDa, antigen CD62) | 2789 | 0.060 | 0.5510 | No |
42 | ARL6IP5 | ARL6IP5 Entrez,  Source | ADP-ribosylation-like factor 6 interacting protein 5 | 2947 | 0.056 | 0.5431 | No |
43 | JUN | JUN Entrez,  Source | jun oncogene | 3104 | 0.052 | 0.5350 | No |
44 | LTBP2 | LTBP2 Entrez,  Source | latent transforming growth factor beta binding protein 2 | 3107 | 0.052 | 0.5385 | No |
45 | ALDH2 | ALDH2 Entrez,  Source | aldehyde dehydrogenase 2 family (mitochondrial) | 3245 | 0.048 | 0.5315 | No |
46 | CDKN1A | CDKN1A Entrez,  Source | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 3506 | 0.043 | 0.5149 | No |
47 | CLU | CLU Entrez,  Source | clusterin | 3739 | 0.038 | 0.5001 | No |
48 | IL6 | IL6 Entrez,  Source | interleukin 6 (interferon, beta 2) | 3854 | 0.036 | 0.4940 | No |
49 | SLC1A1 | SLC1A1 Entrez,  Source | solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 | 3880 | 0.035 | 0.4945 | No |
50 | LPHN2 | LPHN2 Entrez,  Source | latrophilin 2 | 4430 | 0.025 | 0.4548 | No |
51 | IL4R | IL4R Entrez,  Source | interleukin 4 receptor | 4494 | 0.024 | 0.4517 | No |
52 | BMP6 | BMP6 Entrez,  Source | bone morphogenetic protein 6 | 4498 | 0.023 | 0.4532 | No |
53 | PLA2G4A | PLA2G4A Entrez,  Source | phospholipase A2, group IVA (cytosolic, calcium-dependent) | 4688 | 0.020 | 0.4403 | No |
54 | SMAD3 | SMAD3 Entrez,  Source | SMAD, mothers against DPP homolog 3 (Drosophila) | 4720 | 0.020 | 0.4394 | No |
55 | MMP14 | MMP14 Entrez,  Source | matrix metallopeptidase 14 (membrane-inserted) | 4808 | 0.018 | 0.4341 | No |
56 | PGF | PGF Entrez,  Source | placental growth factor, vascular endothelial growth factor-related protein | 5143 | 0.012 | 0.4097 | No |
57 | CHST1 | CHST1 Entrez,  Source | carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 | 5261 | 0.011 | 0.4017 | No |
58 | MAPKAPK3 | MAPKAPK3 Entrez,  Source | mitogen-activated protein kinase-activated protein kinase 3 | 5339 | 0.009 | 0.3965 | No |
59 | TGFBI | TGFBI Entrez,  Source | transforming growth factor, beta-induced, 68kDa | 5439 | 0.008 | 0.3896 | No |
60 | ICAM2 | ICAM2 Entrez,  Source | intercellular adhesion molecule 2 | 5448 | 0.008 | 0.3896 | No |
61 | PFN2 | PFN2 Entrez,  Source | profilin 2 | 5491 | 0.007 | 0.3869 | No |
62 | NR2F2 | NR2F2 Entrez,  Source | nuclear receptor subfamily 2, group F, member 2 | 5565 | 0.006 | 0.3819 | No |
63 | PFKM | PFKM Entrez,  Source | phosphofructokinase, muscle | 5738 | 0.004 | 0.3691 | No |
64 | CXCR4 | CXCR4 Entrez,  Source | chemokine (C-X-C motif) receptor 4 | 5981 | 0.000 | 0.3509 | No |
65 | MT3 | MT3 Entrez,  Source | metallothionein 3 (growth inhibitory factor (neurotrophic)) | 6193 | -0.003 | 0.3352 | No |
66 | LYL1 | LYL1 Entrez,  Source | lymphoblastic leukemia derived sequence 1 | 6356 | -0.006 | 0.3233 | No |
67 | ENO2 | ENO2 Entrez,  Source | enolase 2 (gamma, neuronal) | 6473 | -0.007 | 0.3151 | No |
68 | AGRIN | AGRIN Entrez,  Source | agrin | 6677 | -0.010 | 0.3005 | No |
69 | TFEC | TFEC Entrez,  Source | transcription factor EC | 6760 | -0.012 | 0.2951 | No |
70 | ANPEP | ANPEP Entrez,  Source | alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150) | 6961 | -0.014 | 0.2810 | No |
71 | TPM1 | TPM1 Entrez,  Source | tropomyosin 1 (alpha) | 7114 | -0.017 | 0.2707 | No |
72 | CDH2 | CDH2 Entrez,  Source | cadherin 2, type 1, N-cadherin (neuronal) | 7290 | -0.019 | 0.2589 | No |
73 | RAC2 | RAC2 Entrez,  Source | ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) | 7555 | -0.023 | 0.2406 | No |
74 | TXNRD2 | TXNRD2 Entrez,  Source | thioredoxin reductase 2 | 7578 | -0.024 | 0.2406 | No |
75 | PDLIM4 | PDLIM4 Entrez,  Source | PDZ and LIM domain 4 | 8086 | -0.032 | 0.2046 | No |
76 | EFEMP1 | EFEMP1 Entrez,  Source | EGF-containing fibulin-like extracellular matrix protein 1 | 8124 | -0.033 | 0.2041 | No |
77 | MLLT11 | MLLT11 Entrez,  Source | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 | 9154 | -0.050 | 0.1299 | No |
78 | FHL2 | FHL2 Entrez,  Source | four and a half LIM domains 2 | 9173 | -0.050 | 0.1321 | No |
79 | MVP | MVP Entrez,  Source | major vault protein | 9188 | -0.050 | 0.1346 | No |
80 | CTSC | CTSC Entrez,  Source | cathepsin C | 9429 | -0.055 | 0.1203 | No |
81 | CSPG2 | CSPG2 Entrez,  Source | chondroitin sulfate proteoglycan 2 (versican) | 9690 | -0.060 | 0.1049 | No |
82 | ITGB5 | ITGB5 Entrez,  Source | integrin, beta 5 | 9946 | -0.065 | 0.0902 | No |
83 | PRG1 | PRG1 Entrez,  Source | proteoglycan 1, secretory granule | 10004 | -0.066 | 0.0906 | No |
84 | GADD45A | GADD45A Entrez,  Source | growth arrest and DNA-damage-inducible, alpha | 10152 | -0.069 | 0.0844 | No |
85 | CAP2 | CAP2 Entrez,  Source | CAP, adenylate cyclase-associated protein, 2 (yeast) | 10317 | -0.073 | 0.0771 | No |
86 | SRPX | SRPX Entrez,  Source | sushi-repeat-containing protein, X-linked | 10360 | -0.074 | 0.0792 | No |
87 | SELE | SELE Entrez,  Source | selectin E (endothelial adhesion molecule 1) | 10446 | -0.076 | 0.0781 | No |
88 | ICAM1 | ICAM1 Entrez,  Source | intercellular adhesion molecule 1 (CD54), human rhinovirus receptor | 10770 | -0.085 | 0.0597 | No |
89 | UCHL1 | UCHL1 Entrez,  Source | ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) | 11042 | -0.092 | 0.0457 | No |
90 | SORD | SORD Entrez,  Source | sorbitol dehydrogenase | 11046 | -0.092 | 0.0519 | No |
91 | TACSTD2 | TACSTD2 Entrez,  Source | tumor-associated calcium signal transducer 2 | 11118 | -0.094 | 0.0532 | No |
92 | SLC6A8 | SLC6A8 Entrez,  Source | solute carrier family 6 (neurotransmitter transporter, creatine), member 8 | 11161 | -0.095 | 0.0567 | No |
93 | FAP | FAP Entrez,  Source | fibroblast activation protein, alpha | 11212 | -0.096 | 0.0596 | No |
94 | NMT2 | NMT2 Entrez,  Source | N-myristoyltransferase 2 | 11273 | -0.098 | 0.0620 | No |
95 | PLAU | PLAU Entrez,  Source | plasminogen activator, urokinase | 11891 | -0.121 | 0.0240 | No |
96 | CD44 | CD44 Entrez,  Source | CD44 molecule (Indian blood group) | 12802 | -0.185 | -0.0317 | No |
97 | GBP2 | GBP2 Entrez,  Source | guanylate binding protein 2, interferon-inducible | 12940 | -0.207 | -0.0275 | No |
98 | NRCAM | NRCAM Entrez,  Source | neuronal cell adhesion molecule | 13035 | -0.227 | -0.0186 | No |
99 | SLC7A7 | SLC7A7 Entrez,  Source | solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 | 13061 | -0.237 | -0.0037 | No |
100 | SLC3A2 | SLC3A2 Entrez,  Source | solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 | 13255 | -0.353 | 0.0066 | No |